Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0606

Experiment: m.b. acetate 150 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0604 and B158DRAFT_0605 are separated by 51 nucleotidesB158DRAFT_0605 and B158DRAFT_0606 are separated by 82 nucleotidesB158DRAFT_0606 and B158DRAFT_0607 are separated by 56 nucleotides B158DRAFT_0604: B158DRAFT_0604 - Molecular chaperone GrpE (heat shock protein), at 609,013 to 609,648 _0604 B158DRAFT_0605: B158DRAFT_0605 - Uncharacterized protein conserved in bacteria, at 609,700 to 610,347 _0605 B158DRAFT_0606: B158DRAFT_0606 - Uncharacterized conserved protein, at 610,430 to 611,146 _0606 B158DRAFT_0607: B158DRAFT_0607 - Beta-lactamase class C and other penicillin binding proteins, at 611,203 to 613,095 _0607 Position (kb) 610 611 612Strain fitness (log2 ratio) -2 -1 0 1at 609.653 kb on - strandat 609.668 kb on + strandat 609.675 kb on - strandat 609.725 kb on + strandat 609.757 kb on + strandat 609.824 kb on + strand, within B158DRAFT_0605at 609.832 kb on - strand, within B158DRAFT_0605at 609.843 kb on - strand, within B158DRAFT_0605at 609.910 kb on - strand, within B158DRAFT_0605at 609.924 kb on - strand, within B158DRAFT_0605at 609.929 kb on - strand, within B158DRAFT_0605at 609.934 kb on - strand, within B158DRAFT_0605at 609.934 kb on - strand, within B158DRAFT_0605at 609.934 kb on - strand, within B158DRAFT_0605at 609.951 kb on + strand, within B158DRAFT_0605at 609.976 kb on + strand, within B158DRAFT_0605at 610.130 kb on - strand, within B158DRAFT_0605at 610.181 kb on + strand, within B158DRAFT_0605at 610.189 kb on - strand, within B158DRAFT_0605at 610.189 kb on - strand, within B158DRAFT_0605at 610.223 kb on - strand, within B158DRAFT_0605at 610.299 kb on - strandat 610.349 kb on - strandat 610.356 kb on + strandat 610.356 kb on + strandat 610.356 kb on + strandat 610.366 kb on + strandat 610.368 kb on + strandat 610.376 kb on + strandat 610.376 kb on - strandat 610.384 kb on - strandat 610.398 kb on + strandat 610.442 kb on + strandat 610.442 kb on + strandat 610.442 kb on + strandat 610.500 kb on - strandat 610.517 kb on + strand, within B158DRAFT_0606at 610.527 kb on + strand, within B158DRAFT_0606at 610.537 kb on + strand, within B158DRAFT_0606at 610.537 kb on + strand, within B158DRAFT_0606at 610.545 kb on - strand, within B158DRAFT_0606at 610.545 kb on - strand, within B158DRAFT_0606at 610.565 kb on + strand, within B158DRAFT_0606at 610.568 kb on - strand, within B158DRAFT_0606at 610.573 kb on - strand, within B158DRAFT_0606at 610.575 kb on + strand, within B158DRAFT_0606at 610.583 kb on - strand, within B158DRAFT_0606at 610.619 kb on + strand, within B158DRAFT_0606at 610.627 kb on - strand, within B158DRAFT_0606at 610.636 kb on - strand, within B158DRAFT_0606at 610.640 kb on + strand, within B158DRAFT_0606at 610.640 kb on + strand, within B158DRAFT_0606at 610.648 kb on - strand, within B158DRAFT_0606at 610.663 kb on - strand, within B158DRAFT_0606at 610.663 kb on - strand, within B158DRAFT_0606at 610.694 kb on - strand, within B158DRAFT_0606at 610.748 kb on - strand, within B158DRAFT_0606at 610.796 kb on + strand, within B158DRAFT_0606at 610.804 kb on - strand, within B158DRAFT_0606at 610.901 kb on - strand, within B158DRAFT_0606at 610.901 kb on - strand, within B158DRAFT_0606at 611.114 kb on + strandat 611.122 kb on - strandat 611.161 kb on + strandat 611.169 kb on - strandat 611.169 kb on - strandat 611.169 kb on - strandat 611.169 kb on - strandat 611.172 kb on + strandat 611.414 kb on + strand, within B158DRAFT_0607at 611.414 kb on + strand, within B158DRAFT_0607at 611.414 kb on + strand, within B158DRAFT_0607at 611.414 kb on + strand, within B158DRAFT_0607at 611.422 kb on - strand, within B158DRAFT_0607at 611.422 kb on - strand, within B158DRAFT_0607at 611.422 kb on - strand, within B158DRAFT_0607at 611.500 kb on - strand, within B158DRAFT_0607at 611.517 kb on - strand, within B158DRAFT_0607at 611.529 kb on - strand, within B158DRAFT_0607at 611.655 kb on + strand, within B158DRAFT_0607at 611.698 kb on - strand, within B158DRAFT_0607at 611.728 kb on + strand, within B158DRAFT_0607at 611.728 kb on + strand, within B158DRAFT_0607at 611.728 kb on + strand, within B158DRAFT_0607at 611.736 kb on - strand, within B158DRAFT_0607at 611.739 kb on + strand, within B158DRAFT_0607at 611.747 kb on - strand, within B158DRAFT_0607at 611.763 kb on + strand, within B158DRAFT_0607at 611.823 kb on - strand, within B158DRAFT_0607at 611.922 kb on + strand, within B158DRAFT_0607at 611.923 kb on + strand, within B158DRAFT_0607at 611.951 kb on - strand, within B158DRAFT_0607at 612.019 kb on - strand, within B158DRAFT_0607at 612.066 kb on + strand, within B158DRAFT_0607at 612.089 kb on + strand, within B158DRAFT_0607at 612.096 kb on - strand, within B158DRAFT_0607

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. acetate 150 mM
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609,653 - +0.2
609,668 + +0.1
609,675 - -0.1
609,725 + -2.2
609,757 + +0.1
609,824 + B158DRAFT_0605 0.19 +0.0
609,832 - B158DRAFT_0605 0.20 +0.1
609,843 - B158DRAFT_0605 0.22 +0.1
609,910 - B158DRAFT_0605 0.32 +0.2
609,924 - B158DRAFT_0605 0.35 -1.1
609,929 - B158DRAFT_0605 0.35 -0.1
609,934 - B158DRAFT_0605 0.36 +0.1
609,934 - B158DRAFT_0605 0.36 -0.0
609,934 - B158DRAFT_0605 0.36 -0.6
609,951 + B158DRAFT_0605 0.39 +0.0
609,976 + B158DRAFT_0605 0.43 -0.9
610,130 - B158DRAFT_0605 0.66 -0.3
610,181 + B158DRAFT_0605 0.74 -0.3
610,189 - B158DRAFT_0605 0.75 -0.2
610,189 - B158DRAFT_0605 0.75 -0.1
610,223 - B158DRAFT_0605 0.81 +0.2
610,299 - -0.1
610,349 - -0.3
610,356 + +0.1
610,356 + -0.4
610,356 + +0.1
610,366 + +0.7
610,368 + -0.6
610,376 + -0.3
610,376 - +0.2
610,384 - +1.5
610,398 + +0.3
610,442 + -0.2
610,442 + +0.0
610,442 + +0.3
610,500 - -0.4
610,517 + B158DRAFT_0606 0.12 -0.5
610,527 + B158DRAFT_0606 0.14 -0.6
610,537 + B158DRAFT_0606 0.15 -0.4
610,537 + B158DRAFT_0606 0.15 -0.3
610,545 - B158DRAFT_0606 0.16 +0.4
610,545 - B158DRAFT_0606 0.16 -0.2
610,565 + B158DRAFT_0606 0.19 -0.2
610,568 - B158DRAFT_0606 0.19 +0.1
610,573 - B158DRAFT_0606 0.20 -0.3
610,575 + B158DRAFT_0606 0.20 +0.1
610,583 - B158DRAFT_0606 0.21 +0.8
610,619 + B158DRAFT_0606 0.26 +1.0
610,627 - B158DRAFT_0606 0.27 -0.1
610,636 - B158DRAFT_0606 0.29 -0.4
610,640 + B158DRAFT_0606 0.29 -0.2
610,640 + B158DRAFT_0606 0.29 +0.4
610,648 - B158DRAFT_0606 0.30 -0.0
610,663 - B158DRAFT_0606 0.32 +0.2
610,663 - B158DRAFT_0606 0.32 -0.3
610,694 - B158DRAFT_0606 0.37 -0.3
610,748 - B158DRAFT_0606 0.44 -0.5
610,796 + B158DRAFT_0606 0.51 +0.2
610,804 - B158DRAFT_0606 0.52 -0.3
610,901 - B158DRAFT_0606 0.66 -0.8
610,901 - B158DRAFT_0606 0.66 +0.3
611,114 + +0.4
611,122 - -0.9
611,161 + +0.2
611,169 - -0.1
611,169 - -0.5
611,169 - -0.2
611,169 - -0.4
611,172 + -0.6
611,414 + B158DRAFT_0607 0.11 -0.3
611,414 + B158DRAFT_0607 0.11 -0.4
611,414 + B158DRAFT_0607 0.11 -0.3
611,414 + B158DRAFT_0607 0.11 +0.3
611,422 - B158DRAFT_0607 0.12 -1.0
611,422 - B158DRAFT_0607 0.12 -0.1
611,422 - B158DRAFT_0607 0.12 -0.1
611,500 - B158DRAFT_0607 0.16 -0.5
611,517 - B158DRAFT_0607 0.17 -0.4
611,529 - B158DRAFT_0607 0.17 -0.2
611,655 + B158DRAFT_0607 0.24 -0.1
611,698 - B158DRAFT_0607 0.26 -0.3
611,728 + B158DRAFT_0607 0.28 -0.9
611,728 + B158DRAFT_0607 0.28 -0.4
611,728 + B158DRAFT_0607 0.28 +0.6
611,736 - B158DRAFT_0607 0.28 -0.0
611,739 + B158DRAFT_0607 0.28 -0.0
611,747 - B158DRAFT_0607 0.29 +0.6
611,763 + B158DRAFT_0607 0.30 -0.2
611,823 - B158DRAFT_0607 0.33 -1.2
611,922 + B158DRAFT_0607 0.38 -0.0
611,923 + B158DRAFT_0607 0.38 +0.8
611,951 - B158DRAFT_0607 0.40 -0.1
612,019 - B158DRAFT_0607 0.43 +0.3
612,066 + B158DRAFT_0607 0.46 +0.1
612,089 + B158DRAFT_0607 0.47 +0.2
612,096 - B158DRAFT_0607 0.47 -0.1

Or see this region's nucleotide sequence