Experiment: m.b. acetate 150 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0104 and B158DRAFT_0105 are separated by 84 nucleotides B158DRAFT_0105 and B158DRAFT_0107 are separated by 153 nucleotides B158DRAFT_0107 and B158DRAFT_0108 are separated by 26 nucleotides B158DRAFT_0108 and B158DRAFT_0109 are separated by 22 nucleotides
B158DRAFT_0104: B158DRAFT_0104 - polyribonucleotide nucleotidyltransferase, at 100,098 to 102,218
_0104
B158DRAFT_0105: B158DRAFT_0105 - ribosomal protein S15, bacterial/organelle, at 102,303 to 102,572
_0105
B158DRAFT_0107: B158DRAFT_0107 - Predicted esterase, at 102,726 to 103,280
_0107
B158DRAFT_0108: B158DRAFT_0108 - tRNA pseudouridine 55 synthase, at 103,307 to 104,233
_0108
B158DRAFT_0109: B158DRAFT_0109 - ribosome-binding factor A, at 104,256 to 104,624
_0109
Position (kb) 102
103
104 Strain fitness (log2 ratio) -2
-1
0
1 at 102.778 kb on - strand at 102.868 kb on - strand, within B158DRAFT_0107 at 102.868 kb on - strand, within B158DRAFT_0107 at 102.937 kb on - strand, within B158DRAFT_0107 at 103.182 kb on - strand, within B158DRAFT_0107 at 103.282 kb on + strand at 103.291 kb on - strand at 103.334 kb on - strand at 103.334 kb on - strand at 103.367 kb on + strand at 103.372 kb on + strand at 103.372 kb on + strand at 103.380 kb on - strand at 103.405 kb on + strand, within B158DRAFT_0108 at 103.485 kb on + strand, within B158DRAFT_0108 at 103.498 kb on + strand, within B158DRAFT_0108 at 103.498 kb on + strand, within B158DRAFT_0108 at 103.506 kb on - strand, within B158DRAFT_0108 at 103.598 kb on - strand, within B158DRAFT_0108 at 103.723 kb on - strand, within B158DRAFT_0108 at 103.741 kb on + strand, within B158DRAFT_0108 at 103.935 kb on + strand, within B158DRAFT_0108 at 103.949 kb on + strand, within B158DRAFT_0108 at 103.971 kb on + strand, within B158DRAFT_0108 at 103.974 kb on - strand, within B158DRAFT_0108 at 103.976 kb on + strand, within B158DRAFT_0108 at 103.990 kb on + strand, within B158DRAFT_0108 at 103.990 kb on + strand, within B158DRAFT_0108 at 103.990 kb on + strand, within B158DRAFT_0108 at 103.990 kb on + strand, within B158DRAFT_0108 at 103.998 kb on - strand, within B158DRAFT_0108 at 103.998 kb on - strand, within B158DRAFT_0108 at 103.998 kb on - strand, within B158DRAFT_0108 at 103.998 kb on - strand, within B158DRAFT_0108 at 103.998 kb on - strand, within B158DRAFT_0108 at 103.998 kb on - strand, within B158DRAFT_0108 at 104.027 kb on - strand, within B158DRAFT_0108 at 104.027 kb on - strand, within B158DRAFT_0108 at 104.074 kb on - strand, within B158DRAFT_0108 at 104.151 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. acetate 150 mM remove 102,778 - -0.3 102,868 - B158DRAFT_0107 0.26 -1.5 102,868 - B158DRAFT_0107 0.26 -1.9 102,937 - B158DRAFT_0107 0.38 -2.1 103,182 - B158DRAFT_0107 0.82 -2.4 103,282 + -1.7 103,291 - -0.0 103,334 - +0.7 103,334 - -0.1 103,367 + -1.3 103,372 + -1.6 103,372 + -1.7 103,380 - -0.4 103,405 + B158DRAFT_0108 0.11 -1.7 103,485 + B158DRAFT_0108 0.19 -1.3 103,498 + B158DRAFT_0108 0.21 -1.3 103,498 + B158DRAFT_0108 0.21 +0.4 103,506 - B158DRAFT_0108 0.21 -1.9 103,598 - B158DRAFT_0108 0.31 -0.1 103,723 - B158DRAFT_0108 0.45 +0.1 103,741 + B158DRAFT_0108 0.47 +0.2 103,935 + B158DRAFT_0108 0.68 +0.2 103,949 + B158DRAFT_0108 0.69 +0.6 103,971 + B158DRAFT_0108 0.72 -0.2 103,974 - B158DRAFT_0108 0.72 -0.1 103,976 + B158DRAFT_0108 0.72 -0.5 103,990 + B158DRAFT_0108 0.74 -0.2 103,990 + B158DRAFT_0108 0.74 -0.0 103,990 + B158DRAFT_0108 0.74 +0.4 103,990 + B158DRAFT_0108 0.74 -0.1 103,998 - B158DRAFT_0108 0.75 +0.1 103,998 - B158DRAFT_0108 0.75 -0.2 103,998 - B158DRAFT_0108 0.75 -0.2 103,998 - B158DRAFT_0108 0.75 -0.8 103,998 - B158DRAFT_0108 0.75 +0.1 103,998 - B158DRAFT_0108 0.75 +0.4 104,027 - B158DRAFT_0108 0.78 -0.2 104,027 - B158DRAFT_0108 0.78 +0.1 104,074 - B158DRAFT_0108 0.83 -0.3 104,151 + +0.3
Or see this region's nucleotide sequence