Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_863 and PfGW456L13_864 overlap by 4 nucleotides PfGW456L13_864 and PfGW456L13_865 are separated by 206 nucleotides PfGW456L13_865 and PfGW456L13_866 overlap by 1 nucleotides PfGW456L13_866 and PfGW456L13_867 are separated by 226 nucleotides
PfGW456L13_863 - Twin-arginine translocation protein TatB, at 969,061 to 970,206
_863
PfGW456L13_864 - hypothetical protein, at 970,203 to 970,511
_864
PfGW456L13_865 - Glutathione-regulated potassium-efflux system ATP-binding protein, at 970,718 to 972,628
_865
PfGW456L13_866 - Small-conductance mechanosensitive channel, at 972,628 to 973,209
_866
PfGW456L13_867 - Homoserine/homoserine lactone efflux protein, at 973,436 to 974,068
_867
Position (kb) 970
971
972
973 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 969.897 kb on - strand, within PfGW456L13_863 at 969.897 kb on - strand, within PfGW456L13_863 at 969.934 kb on - strand, within PfGW456L13_863 at 969.961 kb on - strand, within PfGW456L13_863 at 970.122 kb on - strand at 970.122 kb on - strand at 970.204 kb on + strand at 970.204 kb on + strand at 970.204 kb on + strand at 970.204 kb on + strand at 970.205 kb on - strand at 970.205 kb on - strand at 970.205 kb on - strand at 970.205 kb on - strand at 970.205 kb on - strand at 970.205 kb on - strand at 970.205 kb on - strand at 970.205 kb on - strand at 970.205 kb on - strand at 970.293 kb on + strand, within PfGW456L13_864 at 970.293 kb on + strand, within PfGW456L13_864 at 970.293 kb on + strand, within PfGW456L13_864 at 970.293 kb on + strand, within PfGW456L13_864 at 970.294 kb on - strand, within PfGW456L13_864 at 970.344 kb on + strand, within PfGW456L13_864 at 970.344 kb on + strand, within PfGW456L13_864 at 970.345 kb on - strand, within PfGW456L13_864 at 970.345 kb on - strand, within PfGW456L13_864 at 970.496 kb on + strand at 970.523 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.630 kb on + strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.631 kb on - strand at 970.634 kb on + strand at 970.634 kb on + strand at 970.634 kb on + strand at 970.634 kb on + strand at 970.634 kb on + strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.635 kb on - strand at 970.638 kb on + strand at 970.639 kb on - strand at 970.639 kb on - strand at 970.639 kb on - strand at 970.639 kb on - strand at 970.667 kb on + strand at 970.667 kb on + strand at 970.667 kb on + strand at 970.667 kb on + strand at 970.667 kb on + strand at 970.667 kb on + strand at 970.667 kb on + strand at 970.667 kb on + strand at 970.667 kb on + strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.668 kb on - strand at 970.674 kb on - strand at 970.701 kb on + strand at 970.718 kb on - strand at 970.718 kb on - strand at 970.718 kb on - strand at 970.743 kb on + strand at 970.744 kb on - strand at 970.767 kb on + strand at 970.768 kb on - strand at 970.964 kb on + strand, within PfGW456L13_865 at 970.964 kb on + strand, within PfGW456L13_865 at 970.964 kb on + strand, within PfGW456L13_865 at 970.964 kb on + strand, within PfGW456L13_865 at 970.965 kb on - strand, within PfGW456L13_865 at 970.965 kb on - strand, within PfGW456L13_865 at 971.085 kb on - strand, within PfGW456L13_865 at 971.085 kb on - strand, within PfGW456L13_865 at 971.408 kb on + strand, within PfGW456L13_865 at 971.408 kb on + strand, within PfGW456L13_865 at 971.409 kb on - strand, within PfGW456L13_865 at 971.409 kb on - strand, within PfGW456L13_865 at 971.409 kb on - strand, within PfGW456L13_865 at 971.463 kb on - strand, within PfGW456L13_865 at 971.463 kb on - strand, within PfGW456L13_865 at 971.501 kb on + strand, within PfGW456L13_865 at 971.501 kb on + strand, within PfGW456L13_865 at 971.501 kb on + strand, within PfGW456L13_865 at 971.501 kb on + strand, within PfGW456L13_865 at 971.501 kb on + strand, within PfGW456L13_865 at 971.502 kb on - strand, within PfGW456L13_865 at 971.502 kb on - strand, within PfGW456L13_865 at 971.502 kb on - strand, within PfGW456L13_865 at 971.502 kb on - strand, within PfGW456L13_865 at 972.209 kb on + strand, within PfGW456L13_865 at 972.210 kb on - strand, within PfGW456L13_865 at 972.260 kb on + strand, within PfGW456L13_865 at 972.260 kb on + strand, within PfGW456L13_865 at 972.260 kb on + strand, within PfGW456L13_865 at 972.260 kb on + strand, within PfGW456L13_865 at 972.261 kb on - strand, within PfGW456L13_865 at 972.261 kb on - strand, within PfGW456L13_865 at 972.261 kb on - strand, within PfGW456L13_865 at 972.261 kb on - strand, within PfGW456L13_865 at 972.261 kb on - strand, within PfGW456L13_865 at 972.282 kb on - strand, within PfGW456L13_865 at 972.482 kb on + strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.483 kb on - strand at 972.686 kb on + strand at 972.715 kb on + strand, within PfGW456L13_866 at 972.715 kb on + strand, within PfGW456L13_866 at 972.716 kb on - strand, within PfGW456L13_866 at 972.995 kb on + strand, within PfGW456L13_866 at 972.995 kb on + strand, within PfGW456L13_866 at 972.995 kb on + strand, within PfGW456L13_866 at 972.995 kb on + strand, within PfGW456L13_866 at 973.073 kb on - strand, within PfGW456L13_866 at 973.229 kb on + strand at 973.229 kb on + strand at 973.360 kb on + strand at 973.361 kb on - strand at 973.361 kb on - strand at 973.396 kb on + strand at 973.396 kb on + strand at 973.396 kb on + strand at 973.396 kb on + strand at 973.396 kb on + strand at 973.396 kb on + strand at 973.397 kb on - strand at 973.397 kb on - strand at 973.397 kb on - strand at 973.397 kb on - strand at 973.401 kb on + strand at 973.401 kb on + strand at 973.402 kb on - strand at 973.402 kb on - strand at 973.402 kb on - strand at 973.402 kb on - strand at 973.535 kb on + strand, within PfGW456L13_867 at 973.535 kb on + strand, within PfGW456L13_867
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 969,897 - PfGW456L13_863 0.73 +1.1 969,897 - PfGW456L13_863 0.73 -0.5 969,934 - PfGW456L13_863 0.76 -0.3 969,961 - PfGW456L13_863 0.79 +0.7 970,122 - +0.3 970,122 - +0.3 970,204 + +0.1 970,204 + -0.2 970,204 + +1.1 970,204 + -1.0 970,205 - +0.1 970,205 - +0.2 970,205 - +0.1 970,205 - -0.4 970,205 - +0.7 970,205 - -0.7 970,205 - +0.1 970,205 - +0.8 970,205 - -0.4 970,293 + PfGW456L13_864 0.29 +0.6 970,293 + PfGW456L13_864 0.29 +1.3 970,293 + PfGW456L13_864 0.29 +0.1 970,293 + PfGW456L13_864 0.29 +0.3 970,294 - PfGW456L13_864 0.29 +0.0 970,344 + PfGW456L13_864 0.46 +0.7 970,344 + PfGW456L13_864 0.46 -1.1 970,345 - PfGW456L13_864 0.46 +0.1 970,345 - PfGW456L13_864 0.46 +0.2 970,496 + +0.4 970,523 + +0.9 970,630 + +1.1 970,630 + -0.1 970,630 + -0.8 970,630 + -0.9 970,630 + -0.5 970,630 + -0.3 970,630 + +0.1 970,630 + -0.4 970,630 + +0.7 970,630 + +0.6 970,631 - +1.2 970,631 - +0.3 970,631 - -1.5 970,631 - +0.3 970,631 - +0.2 970,631 - +0.2 970,631 - +0.9 970,631 - -0.5 970,631 - +0.9 970,631 - +0.6 970,634 + +0.3 970,634 + -0.5 970,634 + +0.6 970,634 + -0.9 970,634 + -0.2 970,635 - -0.0 970,635 - -1.7 970,635 - +1.5 970,635 - +1.9 970,635 - -0.5 970,635 - -0.7 970,635 - +0.1 970,635 - +0.2 970,635 - -0.2 970,635 - +0.5 970,635 - +0.6 970,635 - -1.4 970,635 - +0.8 970,638 + +0.6 970,639 - -1.1 970,639 - -0.3 970,639 - +0.8 970,639 - +0.3 970,667 + +0.6 970,667 + +0.6 970,667 + +0.8 970,667 + -0.6 970,667 + +0.6 970,667 + +0.4 970,667 + +0.1 970,667 + +1.1 970,667 + +0.6 970,668 - -0.5 970,668 - -0.2 970,668 - -0.9 970,668 - +0.3 970,668 - +0.0 970,668 - -0.0 970,668 - +0.6 970,668 - -0.8 970,668 - -0.1 970,668 - -0.1 970,668 - +0.6 970,668 - +1.9 970,668 - -0.5 970,668 - +0.9 970,668 - +0.9 970,668 - -0.3 970,668 - +0.4 970,668 - -0.3 970,668 - -0.1 970,668 - -0.4 970,668 - +0.2 970,674 - +0.7 970,701 + -0.3 970,718 - +0.5 970,718 - +0.5 970,718 - -0.4 970,743 + +0.5 970,744 - +0.1 970,767 + -0.5 970,768 - -0.1 970,964 + PfGW456L13_865 0.13 +1.0 970,964 + PfGW456L13_865 0.13 +1.0 970,964 + PfGW456L13_865 0.13 +0.6 970,964 + PfGW456L13_865 0.13 -1.3 970,965 - PfGW456L13_865 0.13 +1.1 970,965 - PfGW456L13_865 0.13 +0.7 971,085 - PfGW456L13_865 0.19 +1.4 971,085 - PfGW456L13_865 0.19 +2.1 971,408 + PfGW456L13_865 0.36 +0.4 971,408 + PfGW456L13_865 0.36 +0.3 971,409 - PfGW456L13_865 0.36 +0.1 971,409 - PfGW456L13_865 0.36 +1.1 971,409 - PfGW456L13_865 0.36 +0.6 971,463 - PfGW456L13_865 0.39 +0.1 971,463 - PfGW456L13_865 0.39 +0.2 971,501 + PfGW456L13_865 0.41 +0.7 971,501 + PfGW456L13_865 0.41 +0.5 971,501 + PfGW456L13_865 0.41 -0.7 971,501 + PfGW456L13_865 0.41 +0.4 971,501 + PfGW456L13_865 0.41 -2.1 971,502 - PfGW456L13_865 0.41 -0.9 971,502 - PfGW456L13_865 0.41 +1.1 971,502 - PfGW456L13_865 0.41 +2.1 971,502 - PfGW456L13_865 0.41 +0.9 972,209 + PfGW456L13_865 0.78 -0.2 972,210 - PfGW456L13_865 0.78 +0.3 972,260 + PfGW456L13_865 0.81 +0.5 972,260 + PfGW456L13_865 0.81 -0.4 972,260 + PfGW456L13_865 0.81 -0.1 972,260 + PfGW456L13_865 0.81 +0.1 972,261 - PfGW456L13_865 0.81 +0.7 972,261 - PfGW456L13_865 0.81 +1.1 972,261 - PfGW456L13_865 0.81 +1.1 972,261 - PfGW456L13_865 0.81 -0.2 972,261 - PfGW456L13_865 0.81 +0.1 972,282 - PfGW456L13_865 0.82 -0.1 972,482 + -1.1 972,483 - -0.3 972,483 - +1.2 972,483 - +0.3 972,483 - +1.0 972,483 - +1.5 972,483 - +0.6 972,483 - +2.8 972,483 - +1.1 972,483 - +0.8 972,483 - -0.2 972,686 + +0.5 972,715 + PfGW456L13_866 0.15 +0.7 972,715 + PfGW456L13_866 0.15 +1.1 972,716 - PfGW456L13_866 0.15 +0.5 972,995 + PfGW456L13_866 0.63 +0.7 972,995 + PfGW456L13_866 0.63 +0.8 972,995 + PfGW456L13_866 0.63 -0.3 972,995 + PfGW456L13_866 0.63 +0.2 973,073 - PfGW456L13_866 0.76 +0.8 973,229 + +0.6 973,229 + +1.1 973,360 + +0.4 973,361 - -2.4 973,361 - -0.0 973,396 + +0.4 973,396 + +1.1 973,396 + +0.1 973,396 + +0.0 973,396 + +0.0 973,396 + -0.2 973,397 - -0.3 973,397 - -0.5 973,397 - +0.7 973,397 - +0.7 973,401 + +0.2 973,401 + -0.1 973,402 - -0.1 973,402 - +0.6 973,402 - +0.6 973,402 - +0.6 973,535 + PfGW456L13_867 0.16 -1.2 973,535 + PfGW456L13_867 0.16 -0.7
Or see this region's nucleotide sequence