Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_73 and PfGW456L13_74 are separated by 47 nucleotides PfGW456L13_74 and PfGW456L13_75 are separated by 20 nucleotides PfGW456L13_75 and PfGW456L13_76 are separated by 192 nucleotides
PfGW456L13_73 - FIG00955840: hypothetical protein, at 84,087 to 84,440
_73
PfGW456L13_74 - Copper metallochaperone, bacterial analog of Cox17 protein, at 84,488 to 84,967
_74
PfGW456L13_75 - Putative multicopper oxidases, at 84,988 to 85,440
_75
PfGW456L13_76 - Outer membrane receptor proteins, mostly Fe transport, at 85,633 to 87,750
_76
Position (kb) 84
85
86 Strain fitness (log2 ratio) -2
-1
0
1
2 at 83.998 kb on + strand at 83.998 kb on + strand at 83.999 kb on - strand at 83.999 kb on - strand at 84.317 kb on + strand, within PfGW456L13_73 at 84.317 kb on + strand, within PfGW456L13_73 at 84.330 kb on + strand, within PfGW456L13_73 at 84.965 kb on + strand at 85.350 kb on + strand, within PfGW456L13_75 at 85.350 kb on + strand, within PfGW456L13_75 at 85.350 kb on + strand, within PfGW456L13_75 at 85.350 kb on + strand, within PfGW456L13_75 at 85.519 kb on + strand at 85.519 kb on + strand at 85.519 kb on + strand at 85.519 kb on + strand at 85.520 kb on - strand at 85.520 kb on - strand at 85.609 kb on + strand at 85.681 kb on + strand at 85.681 kb on + strand at 85.681 kb on + strand at 85.681 kb on + strand at 85.681 kb on + strand at 85.682 kb on - strand at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.053 kb on + strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.054 kb on - strand, within PfGW456L13_76 at 86.071 kb on + strand, within PfGW456L13_76 at 86.071 kb on + strand, within PfGW456L13_76 at 86.139 kb on + strand, within PfGW456L13_76 at 86.266 kb on + strand, within PfGW456L13_76 at 86.267 kb on - strand, within PfGW456L13_76 at 86.306 kb on - strand, within PfGW456L13_76
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 83,998 + +1.4 83,998 + +1.1 83,999 - -0.5 83,999 - -1.3 84,317 + PfGW456L13_73 0.65 -0.3 84,317 + PfGW456L13_73 0.65 +1.3 84,330 + PfGW456L13_73 0.69 +0.7 84,965 + +1.9 85,350 + PfGW456L13_75 0.80 +1.1 85,350 + PfGW456L13_75 0.80 -1.4 85,350 + PfGW456L13_75 0.80 -0.4 85,350 + PfGW456L13_75 0.80 -1.4 85,519 + +0.6 85,519 + -0.1 85,519 + +1.2 85,519 + -0.2 85,520 - -0.4 85,520 - -0.2 85,609 + -0.1 85,681 + -0.1 85,681 + +0.8 85,681 + -1.1 85,681 + +1.2 85,681 + -0.3 85,682 - +0.3 86,053 + PfGW456L13_76 0.20 -0.2 86,053 + PfGW456L13_76 0.20 +0.2 86,053 + PfGW456L13_76 0.20 -0.4 86,053 + PfGW456L13_76 0.20 -0.1 86,053 + PfGW456L13_76 0.20 -0.3 86,053 + PfGW456L13_76 0.20 -0.8 86,053 + PfGW456L13_76 0.20 -1.8 86,053 + PfGW456L13_76 0.20 +0.8 86,053 + PfGW456L13_76 0.20 -0.7 86,054 - PfGW456L13_76 0.20 -0.5 86,054 - PfGW456L13_76 0.20 +0.3 86,054 - PfGW456L13_76 0.20 +0.6 86,054 - PfGW456L13_76 0.20 -1.1 86,054 - PfGW456L13_76 0.20 +0.5 86,071 + PfGW456L13_76 0.21 -0.1 86,071 + PfGW456L13_76 0.21 -0.1 86,139 + PfGW456L13_76 0.24 +0.7 86,266 + PfGW456L13_76 0.30 +0.6 86,267 - PfGW456L13_76 0.30 +0.2 86,306 - PfGW456L13_76 0.32 +0.0
Or see this region's nucleotide sequence