Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4298 and PfGW456L13_4299 overlap by 11 nucleotides PfGW456L13_4299 and PfGW456L13_4300 are separated by 88 nucleotides
PfGW456L13_4298 - D-glycerate 2-kinase (EC 2.7.1.-), at 4,814,913 to 4,816,193
_4298
PfGW456L13_4299 - Pyruvate kinase (EC 2.7.1.40), at 4,816,183 to 4,817,598
_4299
PfGW456L13_4300 - Eukaryotic-type low-affinity urea transporter, at 4,817,687 to 4,818,658
_4300
Position (kb)
4816
4817
4818 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.449 kb on + strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.450 kb on - strand, within PfGW456L13_4298 at 4815.453 kb on + strand, within PfGW456L13_4298 at 4815.453 kb on + strand, within PfGW456L13_4298 at 4815.453 kb on + strand, within PfGW456L13_4298 at 4815.453 kb on + strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.454 kb on - strand, within PfGW456L13_4298 at 4815.507 kb on - strand, within PfGW456L13_4298 at 4815.551 kb on - strand, within PfGW456L13_4298 at 4815.948 kb on + strand, within PfGW456L13_4298 at 4815.949 kb on - strand, within PfGW456L13_4298 at 4815.949 kb on - strand, within PfGW456L13_4298 at 4816.023 kb on + strand, within PfGW456L13_4298 at 4816.024 kb on - strand, within PfGW456L13_4298 at 4816.114 kb on + strand at 4816.115 kb on - strand at 4816.178 kb on + strand at 4816.179 kb on - strand at 4816.194 kb on + strand at 4816.598 kb on - strand, within PfGW456L13_4299 at 4816.598 kb on - strand, within PfGW456L13_4299 at 4816.664 kb on + strand, within PfGW456L13_4299 at 4816.664 kb on + strand, within PfGW456L13_4299 at 4817.132 kb on - strand, within PfGW456L13_4299 at 4817.194 kb on + strand, within PfGW456L13_4299 at 4817.271 kb on + strand, within PfGW456L13_4299 at 4817.308 kb on + strand, within PfGW456L13_4299 at 4817.308 kb on + strand, within PfGW456L13_4299 at 4817.308 kb on + strand, within PfGW456L13_4299 at 4817.309 kb on - strand, within PfGW456L13_4299 at 4817.309 kb on - strand, within PfGW456L13_4299 at 4817.309 kb on - strand, within PfGW456L13_4299 at 4817.309 kb on - strand, within PfGW456L13_4299 at 4817.568 kb on + strand at 4817.568 kb on + strand at 4817.569 kb on - strand at 4817.569 kb on - strand at 4817.569 kb on - strand at 4817.596 kb on + strand at 4817.597 kb on - strand at 4817.942 kb on + strand, within PfGW456L13_4300 at 4817.942 kb on + strand, within PfGW456L13_4300 at 4817.942 kb on + strand, within PfGW456L13_4300 at 4817.943 kb on - strand, within PfGW456L13_4300 at 4817.943 kb on - strand, within PfGW456L13_4300 at 4817.978 kb on + strand, within PfGW456L13_4300 at 4817.979 kb on - strand, within PfGW456L13_4300 at 4818.003 kb on + strand, within PfGW456L13_4300 at 4818.004 kb on - strand, within PfGW456L13_4300 at 4818.116 kb on + strand, within PfGW456L13_4300 at 4818.116 kb on + strand, within PfGW456L13_4300 at 4818.129 kb on - strand, within PfGW456L13_4300 at 4818.129 kb on - strand, within PfGW456L13_4300 at 4818.129 kb on - strand, within PfGW456L13_4300 at 4818.390 kb on - strand, within PfGW456L13_4300 at 4818.416 kb on + strand, within PfGW456L13_4300 at 4818.416 kb on + strand, within PfGW456L13_4300 at 4818.416 kb on + strand, within PfGW456L13_4300 at 4818.416 kb on + strand, within PfGW456L13_4300 at 4818.416 kb on + strand, within PfGW456L13_4300 at 4818.416 kb on + strand, within PfGW456L13_4300 at 4818.417 kb on - strand, within PfGW456L13_4300
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 4,815,449 + PfGW456L13_4298 0.42 +0.8 4,815,449 + PfGW456L13_4298 0.42 +1.1 4,815,449 + PfGW456L13_4298 0.42 -0.5 4,815,449 + PfGW456L13_4298 0.42 +0.4 4,815,449 + PfGW456L13_4298 0.42 +0.3 4,815,449 + PfGW456L13_4298 0.42 +0.3 4,815,449 + PfGW456L13_4298 0.42 -0.4 4,815,449 + PfGW456L13_4298 0.42 -0.3 4,815,450 - PfGW456L13_4298 0.42 +2.3 4,815,450 - PfGW456L13_4298 0.42 -0.5 4,815,450 - PfGW456L13_4298 0.42 -0.1 4,815,450 - PfGW456L13_4298 0.42 -1.1 4,815,450 - PfGW456L13_4298 0.42 +0.4 4,815,450 - PfGW456L13_4298 0.42 +0.3 4,815,450 - PfGW456L13_4298 0.42 -0.3 4,815,450 - PfGW456L13_4298 0.42 -0.3 4,815,450 - PfGW456L13_4298 0.42 -0.3 4,815,450 - PfGW456L13_4298 0.42 +0.4 4,815,450 - PfGW456L13_4298 0.42 +0.2 4,815,450 - PfGW456L13_4298 0.42 +2.4 4,815,450 - PfGW456L13_4298 0.42 -0.6 4,815,450 - PfGW456L13_4298 0.42 -0.7 4,815,453 + PfGW456L13_4298 0.42 +0.6 4,815,453 + PfGW456L13_4298 0.42 +0.3 4,815,453 + PfGW456L13_4298 0.42 +0.1 4,815,453 + PfGW456L13_4298 0.42 -0.7 4,815,454 - PfGW456L13_4298 0.42 -0.8 4,815,454 - PfGW456L13_4298 0.42 +0.0 4,815,454 - PfGW456L13_4298 0.42 +0.5 4,815,454 - PfGW456L13_4298 0.42 -0.1 4,815,454 - PfGW456L13_4298 0.42 -1.6 4,815,454 - PfGW456L13_4298 0.42 -0.7 4,815,507 - PfGW456L13_4298 0.46 -0.1 4,815,551 - PfGW456L13_4298 0.50 +0.5 4,815,948 + PfGW456L13_4298 0.81 +0.3 4,815,949 - PfGW456L13_4298 0.81 +0.0 4,815,949 - PfGW456L13_4298 0.81 -0.2 4,816,023 + PfGW456L13_4298 0.87 -0.3 4,816,024 - PfGW456L13_4298 0.87 +0.0 4,816,114 + +0.6 4,816,115 - -0.0 4,816,178 + -0.7 4,816,179 - +0.4 4,816,194 + +1.0 4,816,598 - PfGW456L13_4299 0.29 +0.2 4,816,598 - PfGW456L13_4299 0.29 -0.1 4,816,664 + PfGW456L13_4299 0.34 +1.1 4,816,664 + PfGW456L13_4299 0.34 -0.6 4,817,132 - PfGW456L13_4299 0.67 -0.1 4,817,194 + PfGW456L13_4299 0.71 -0.3 4,817,271 + PfGW456L13_4299 0.77 -0.9 4,817,308 + PfGW456L13_4299 0.79 -0.3 4,817,308 + PfGW456L13_4299 0.79 +0.8 4,817,308 + PfGW456L13_4299 0.79 -0.8 4,817,309 - PfGW456L13_4299 0.80 -0.3 4,817,309 - PfGW456L13_4299 0.80 +0.4 4,817,309 - PfGW456L13_4299 0.80 -0.4 4,817,309 - PfGW456L13_4299 0.80 -1.1 4,817,568 + -0.4 4,817,568 + -1.5 4,817,569 - -0.5 4,817,569 - +0.3 4,817,569 - +0.5 4,817,596 + -0.1 4,817,597 - +0.6 4,817,942 + PfGW456L13_4300 0.26 -0.2 4,817,942 + PfGW456L13_4300 0.26 +0.2 4,817,942 + PfGW456L13_4300 0.26 -0.2 4,817,943 - PfGW456L13_4300 0.26 -2.0 4,817,943 - PfGW456L13_4300 0.26 -0.1 4,817,978 + PfGW456L13_4300 0.30 +0.8 4,817,979 - PfGW456L13_4300 0.30 -0.1 4,818,003 + PfGW456L13_4300 0.33 +0.6 4,818,004 - PfGW456L13_4300 0.33 -0.7 4,818,116 + PfGW456L13_4300 0.44 +0.4 4,818,116 + PfGW456L13_4300 0.44 -0.4 4,818,129 - PfGW456L13_4300 0.45 +0.1 4,818,129 - PfGW456L13_4300 0.45 +0.6 4,818,129 - PfGW456L13_4300 0.45 +0.8 4,818,390 - PfGW456L13_4300 0.72 +0.5 4,818,416 + PfGW456L13_4300 0.75 +0.5 4,818,416 + PfGW456L13_4300 0.75 -0.1 4,818,416 + PfGW456L13_4300 0.75 +2.0 4,818,416 + PfGW456L13_4300 0.75 -0.2 4,818,416 + PfGW456L13_4300 0.75 -1.0 4,818,416 + PfGW456L13_4300 0.75 -1.3 4,818,417 - PfGW456L13_4300 0.75 -0.3
Or see this region's nucleotide sequence