Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_3204 and PfGW456L13_3205 are separated by 99 nucleotides PfGW456L13_3205 and PfGW456L13_3206 overlap by 8 nucleotides
PfGW456L13_3204 - ABC transporter, substrate binding protein, at 3,586,119 to 3,587,720
_3204
PfGW456L13_3205 - Aldehyde dehydrogenase (EC 1.2.1.3), at 3,587,820 to 3,589,235
_3205
PfGW456L13_3206 - Aspartate aminotransferase (EC 2.6.1.1), at 3,589,228 to 3,590,418
_3206
Position (kb)
3587
3588
3589
3590 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3586.841 kb on - strand, within PfGW456L13_3204 at 3586.841 kb on - strand, within PfGW456L13_3204 at 3586.841 kb on - strand, within PfGW456L13_3204 at 3586.841 kb on - strand, within PfGW456L13_3204 at 3587.152 kb on + strand, within PfGW456L13_3204 at 3587.152 kb on + strand, within PfGW456L13_3204 at 3587.153 kb on - strand, within PfGW456L13_3204 at 3587.167 kb on + strand, within PfGW456L13_3204 at 3587.168 kb on - strand, within PfGW456L13_3204 at 3587.168 kb on - strand, within PfGW456L13_3204 at 3587.456 kb on + strand, within PfGW456L13_3204 at 3587.456 kb on + strand, within PfGW456L13_3204 at 3587.457 kb on - strand, within PfGW456L13_3204 at 3587.457 kb on - strand, within PfGW456L13_3204 at 3587.457 kb on - strand, within PfGW456L13_3204 at 3587.458 kb on + strand, within PfGW456L13_3204 at 3587.458 kb on + strand, within PfGW456L13_3204 at 3587.458 kb on + strand, within PfGW456L13_3204 at 3587.458 kb on + strand, within PfGW456L13_3204 at 3587.458 kb on + strand, within PfGW456L13_3204 at 3587.458 kb on + strand, within PfGW456L13_3204 at 3587.459 kb on - strand, within PfGW456L13_3204 at 3587.459 kb on - strand, within PfGW456L13_3204 at 3587.459 kb on - strand, within PfGW456L13_3204 at 3587.459 kb on - strand, within PfGW456L13_3204 at 3587.459 kb on - strand, within PfGW456L13_3204 at 3587.459 kb on - strand, within PfGW456L13_3204 at 3587.647 kb on + strand at 3587.647 kb on + strand at 3587.648 kb on - strand at 3587.648 kb on - strand at 3587.696 kb on + strand at 3587.697 kb on - strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.797 kb on + strand at 3587.798 kb on - strand at 3587.798 kb on - strand at 3587.798 kb on - strand at 3587.798 kb on - strand at 3587.798 kb on - strand at 3587.798 kb on - strand at 3587.798 kb on - strand at 3587.798 kb on - strand at 3587.899 kb on + strand at 3587.921 kb on - strand at 3587.921 kb on - strand at 3588.160 kb on + strand, within PfGW456L13_3205 at 3588.160 kb on + strand at 3588.160 kb on + strand, within PfGW456L13_3205 at 3588.160 kb on + strand, within PfGW456L13_3205 at 3588.160 kb on + strand, within PfGW456L13_3205 at 3588.160 kb on + strand, within PfGW456L13_3205 at 3588.238 kb on + strand, within PfGW456L13_3205 at 3588.238 kb on + strand, within PfGW456L13_3205 at 3588.239 kb on - strand, within PfGW456L13_3205 at 3588.239 kb on - strand, within PfGW456L13_3205 at 3588.573 kb on - strand, within PfGW456L13_3205 at 3588.895 kb on + strand, within PfGW456L13_3205 at 3588.896 kb on - strand, within PfGW456L13_3205 at 3588.968 kb on + strand, within PfGW456L13_3205 at 3589.028 kb on + strand, within PfGW456L13_3205 at 3589.229 kb on + strand at 3589.229 kb on + strand at 3589.230 kb on - strand at 3589.230 kb on - strand at 3589.230 kb on - strand at 3589.799 kb on + strand, within PfGW456L13_3206 at 3589.799 kb on + strand, within PfGW456L13_3206 at 3590.033 kb on + strand, within PfGW456L13_3206 at 3590.033 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.042 kb on + strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand, within PfGW456L13_3206 at 3590.043 kb on - strand at 3590.083 kb on + strand, within PfGW456L13_3206 at 3590.225 kb on + strand, within PfGW456L13_3206
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 3,586,841 - PfGW456L13_3204 0.45 -1.9 3,586,841 - PfGW456L13_3204 0.45 +0.3 3,586,841 - PfGW456L13_3204 0.45 -0.9 3,586,841 - PfGW456L13_3204 0.45 -0.7 3,587,152 + PfGW456L13_3204 0.64 +0.1 3,587,152 + PfGW456L13_3204 0.64 +0.8 3,587,153 - PfGW456L13_3204 0.65 +0.9 3,587,167 + PfGW456L13_3204 0.65 -1.2 3,587,168 - PfGW456L13_3204 0.65 -0.5 3,587,168 - PfGW456L13_3204 0.65 +0.3 3,587,456 + PfGW456L13_3204 0.83 +1.1 3,587,456 + PfGW456L13_3204 0.83 -0.3 3,587,457 - PfGW456L13_3204 0.84 +0.3 3,587,457 - PfGW456L13_3204 0.84 +1.2 3,587,457 - PfGW456L13_3204 0.84 -0.3 3,587,458 + PfGW456L13_3204 0.84 +0.0 3,587,458 + PfGW456L13_3204 0.84 -0.4 3,587,458 + PfGW456L13_3204 0.84 +0.5 3,587,458 + PfGW456L13_3204 0.84 +0.6 3,587,458 + PfGW456L13_3204 0.84 +0.3 3,587,458 + PfGW456L13_3204 0.84 +0.5 3,587,459 - PfGW456L13_3204 0.84 -0.6 3,587,459 - PfGW456L13_3204 0.84 -0.2 3,587,459 - PfGW456L13_3204 0.84 +2.5 3,587,459 - PfGW456L13_3204 0.84 -1.1 3,587,459 - PfGW456L13_3204 0.84 +0.4 3,587,459 - PfGW456L13_3204 0.84 +0.6 3,587,647 + -0.4 3,587,647 + +0.6 3,587,648 - +0.3 3,587,648 - +0.0 3,587,696 + +0.9 3,587,697 - +0.4 3,587,797 + +1.0 3,587,797 + +0.9 3,587,797 + +0.4 3,587,797 + +0.4 3,587,797 + -0.6 3,587,797 + +1.4 3,587,797 + -0.8 3,587,797 + +0.4 3,587,797 + +1.0 3,587,797 + +0.9 3,587,798 - -0.3 3,587,798 - +0.4 3,587,798 - -0.5 3,587,798 - -0.8 3,587,798 - -0.5 3,587,798 - +0.2 3,587,798 - +0.2 3,587,798 - +0.2 3,587,899 + -0.9 3,587,921 - -0.1 3,587,921 - -0.2 3,588,160 + PfGW456L13_3205 0.24 -0.9 3,588,160 + -0.8 3,588,160 + PfGW456L13_3205 0.24 +0.7 3,588,160 + PfGW456L13_3205 0.24 +0.6 3,588,160 + PfGW456L13_3205 0.24 -0.7 3,588,160 + PfGW456L13_3205 0.24 +1.0 3,588,238 + PfGW456L13_3205 0.30 -0.2 3,588,238 + PfGW456L13_3205 0.30 -0.0 3,588,239 - PfGW456L13_3205 0.30 -0.1 3,588,239 - PfGW456L13_3205 0.30 +0.3 3,588,573 - PfGW456L13_3205 0.53 -0.6 3,588,895 + PfGW456L13_3205 0.76 -1.7 3,588,896 - PfGW456L13_3205 0.76 +0.3 3,588,968 + PfGW456L13_3205 0.81 -0.5 3,589,028 + PfGW456L13_3205 0.85 +1.4 3,589,229 + -0.9 3,589,229 + -1.3 3,589,230 - -1.0 3,589,230 - +0.1 3,589,230 - +0.4 3,589,799 + PfGW456L13_3206 0.48 -1.4 3,589,799 + PfGW456L13_3206 0.48 -0.5 3,590,033 + PfGW456L13_3206 0.68 -0.5 3,590,033 + PfGW456L13_3206 0.68 +0.2 3,590,042 + PfGW456L13_3206 0.68 -0.1 3,590,042 + PfGW456L13_3206 0.68 -0.1 3,590,042 + PfGW456L13_3206 0.68 +0.1 3,590,042 + PfGW456L13_3206 0.68 -0.1 3,590,042 + PfGW456L13_3206 0.68 +2.0 3,590,042 + PfGW456L13_3206 0.68 +1.4 3,590,042 + PfGW456L13_3206 0.68 +0.4 3,590,042 + PfGW456L13_3206 0.68 -1.8 3,590,042 + PfGW456L13_3206 0.68 +0.3 3,590,043 - PfGW456L13_3206 0.68 -1.6 3,590,043 - PfGW456L13_3206 0.68 -1.1 3,590,043 - PfGW456L13_3206 0.68 +0.4 3,590,043 - PfGW456L13_3206 0.68 +0.1 3,590,043 - PfGW456L13_3206 0.68 -0.2 3,590,043 - PfGW456L13_3206 0.68 +1.1 3,590,043 - PfGW456L13_3206 0.68 -0.5 3,590,043 - PfGW456L13_3206 0.68 +0.6 3,590,043 - PfGW456L13_3206 0.68 -0.3 3,590,043 - +0.4 3,590,083 + PfGW456L13_3206 0.72 -0.1 3,590,225 + PfGW456L13_3206 0.84 -0.3
Or see this region's nucleotide sequence