Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1901 and PfGW456L13_1902 overlap by 14 nucleotides PfGW456L13_1902 and PfGW456L13_1903 are separated by 17 nucleotides PfGW456L13_1903 and PfGW456L13_1904 are separated by 274 nucleotides
PfGW456L13_1901 - Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49), at 2,095,897 to 2,097,366
_1901
PfGW456L13_1902 - 6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type, at 2,097,353 to 2,098,066
_1902
PfGW456L13_1903 - 4-hydroxy-2-oxoglutarate aldolase (EC 4.1.3.16) @ 2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14), at 2,098,084 to 2,098,749
_1903
PfGW456L13_1904 - putative dioxygenase, at 2,099,024 to 2,099,749
_1904
Position (kb)
2097
2098
2099 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2096.407 kb on + strand, within PfGW456L13_1901 at 2096.422 kb on + strand, within PfGW456L13_1901 at 2096.422 kb on + strand, within PfGW456L13_1901 at 2096.422 kb on + strand, within PfGW456L13_1901 at 2096.422 kb on + strand, within PfGW456L13_1901 at 2096.503 kb on + strand, within PfGW456L13_1901 at 2096.752 kb on + strand, within PfGW456L13_1901 at 2096.890 kb on + strand, within PfGW456L13_1901 at 2096.890 kb on + strand, within PfGW456L13_1901 at 2096.890 kb on + strand, within PfGW456L13_1901 at 2096.962 kb on + strand, within PfGW456L13_1901 at 2096.962 kb on + strand, within PfGW456L13_1901 at 2096.962 kb on + strand, within PfGW456L13_1901 at 2096.962 kb on + strand, within PfGW456L13_1901 at 2096.962 kb on + strand, within PfGW456L13_1901 at 2097.204 kb on + strand, within PfGW456L13_1901 at 2097.352 kb on + strand at 2097.401 kb on + strand at 2097.401 kb on + strand at 2097.401 kb on + strand at 2097.401 kb on + strand at 2097.401 kb on + strand at 2097.401 kb on + strand at 2098.761 kb on + strand at 2098.761 kb on + strand at 2098.761 kb on + strand at 2098.761 kb on + strand at 2098.761 kb on + strand at 2098.762 kb on - strand at 2098.762 kb on - strand at 2098.762 kb on - strand at 2098.762 kb on - strand at 2098.780 kb on + strand at 2098.780 kb on + strand at 2098.781 kb on - strand at 2098.781 kb on - strand at 2098.781 kb on - strand at 2098.886 kb on + strand at 2098.886 kb on + strand at 2098.887 kb on - strand at 2098.887 kb on - strand at 2098.887 kb on - strand at 2098.887 kb on - strand at 2098.887 kb on - strand at 2098.887 kb on - strand at 2098.887 kb on - strand at 2098.887 kb on - strand at 2098.887 kb on - strand at 2098.955 kb on + strand at 2098.955 kb on + strand at 2098.955 kb on + strand at 2098.955 kb on + strand at 2098.956 kb on - strand at 2098.956 kb on - strand at 2098.956 kb on - strand at 2098.956 kb on - strand at 2098.956 kb on - strand at 2098.956 kb on - strand at 2098.956 kb on - strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.959 kb on + strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2098.960 kb on - strand at 2099.007 kb on - strand at 2099.007 kb on - strand at 2099.063 kb on + strand at 2099.063 kb on + strand at 2099.064 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 2,096,407 + PfGW456L13_1901 0.35 -2.3 2,096,422 + PfGW456L13_1901 0.36 -1.3 2,096,422 + PfGW456L13_1901 0.36 -1.9 2,096,422 + PfGW456L13_1901 0.36 -2.3 2,096,422 + PfGW456L13_1901 0.36 -3.0 2,096,503 + PfGW456L13_1901 0.41 -1.5 2,096,752 + PfGW456L13_1901 0.58 -1.3 2,096,890 + PfGW456L13_1901 0.68 -3.0 2,096,890 + PfGW456L13_1901 0.68 -2.4 2,096,890 + PfGW456L13_1901 0.68 -3.4 2,096,962 + PfGW456L13_1901 0.72 -0.1 2,096,962 + PfGW456L13_1901 0.72 -0.9 2,096,962 + PfGW456L13_1901 0.72 -2.0 2,096,962 + PfGW456L13_1901 0.72 -3.0 2,096,962 + PfGW456L13_1901 0.72 -0.7 2,097,204 + PfGW456L13_1901 0.89 -3.6 2,097,352 + +0.3 2,097,401 + -0.4 2,097,401 + -2.1 2,097,401 + -1.7 2,097,401 + -2.3 2,097,401 + -2.0 2,097,401 + -1.9 2,098,761 + -0.3 2,098,761 + -0.1 2,098,761 + +0.9 2,098,761 + -0.2 2,098,761 + +0.9 2,098,762 - +0.5 2,098,762 - -0.2 2,098,762 - +0.3 2,098,762 - +1.0 2,098,780 + -0.2 2,098,780 + -0.2 2,098,781 - +0.4 2,098,781 - -0.0 2,098,781 - +0.1 2,098,886 + +0.4 2,098,886 + -0.6 2,098,887 - -0.2 2,098,887 - -0.2 2,098,887 - -0.0 2,098,887 - +1.1 2,098,887 - -0.5 2,098,887 - +0.5 2,098,887 - -0.5 2,098,887 - +1.1 2,098,887 - +1.5 2,098,955 + +0.0 2,098,955 + -0.5 2,098,955 + -0.2 2,098,955 + -0.3 2,098,956 - -0.1 2,098,956 - +0.6 2,098,956 - +0.5 2,098,956 - -0.3 2,098,956 - -0.8 2,098,956 - +0.5 2,098,956 - +0.8 2,098,959 + +0.7 2,098,959 + +1.9 2,098,959 + -0.6 2,098,959 + +0.4 2,098,959 + +0.4 2,098,959 + +0.6 2,098,959 + -0.6 2,098,959 + -0.1 2,098,959 + +1.7 2,098,959 + +0.3 2,098,959 + -0.0 2,098,959 + -0.3 2,098,959 + -0.1 2,098,959 + -0.5 2,098,959 + -0.6 2,098,959 + +1.6 2,098,959 + -0.2 2,098,959 + +0.3 2,098,959 + +0.1 2,098,959 + +1.7 2,098,959 + -0.2 2,098,959 + -0.6 2,098,959 + +0.1 2,098,959 + +0.2 2,098,959 + +0.1 2,098,960 - +1.2 2,098,960 - -0.1 2,098,960 - +0.5 2,098,960 - -0.9 2,098,960 - +0.1 2,098,960 - +1.1 2,098,960 - -1.2 2,098,960 - +0.5 2,098,960 - -0.2 2,098,960 - -0.2 2,098,960 - +0.4 2,098,960 - +0.3 2,098,960 - +1.1 2,098,960 - +1.3 2,098,960 - +1.2 2,098,960 - +1.2 2,098,960 - -0.1 2,098,960 - -0.1 2,098,960 - +0.5 2,098,960 - +0.4 2,098,960 - -1.0 2,099,007 - -0.3 2,099,007 - -0.3 2,099,063 + -0.3 2,099,063 + -0.2 2,099,064 - +0.5
Or see this region's nucleotide sequence