Experiment: L-Histidine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1224 and PfGW456L13_1225 are separated by 247 nucleotides PfGW456L13_1225 and PfGW456L13_1226 are separated by 191 nucleotides PfGW456L13_1226 and PfGW456L13_1227 are separated by 178 nucleotides
PfGW456L13_1224 - Vfr transcriptional regulator / Cyclic AMP receptor protein, at 1,366,657 to 1,367,301
_1224
PfGW456L13_1225 - OsmC/Ohr family protein, at 1,367,549 to 1,367,971
_1225
PfGW456L13_1226 - S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A, at 1,368,163 to 1,369,002
_1226
PfGW456L13_1227 - 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase (EC 1.14.13.-), at 1,369,181 to 1,369,897
_1227
Position (kb)
1368
1369
1370 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1367.292 kb on + strand at 1367.293 kb on - strand at 1367.293 kb on - strand at 1367.293 kb on - strand at 1367.293 kb on - strand at 1367.307 kb on + strand at 1367.344 kb on + strand at 1367.372 kb on + strand at 1367.372 kb on + strand at 1367.373 kb on - strand at 1367.373 kb on - strand at 1367.384 kb on - strand at 1367.384 kb on - strand at 1367.384 kb on - strand at 1367.384 kb on - strand at 1367.417 kb on + strand at 1367.436 kb on + strand at 1367.437 kb on - strand at 1367.448 kb on + strand at 1367.448 kb on + strand at 1367.448 kb on + strand at 1367.448 kb on + strand at 1367.448 kb on + strand at 1367.448 kb on + strand at 1367.448 kb on + strand at 1367.448 kb on + strand at 1367.449 kb on - strand at 1367.452 kb on + strand at 1367.452 kb on + strand at 1367.452 kb on + strand at 1367.452 kb on + strand at 1367.452 kb on + strand at 1367.453 kb on - strand at 1367.453 kb on - strand at 1367.453 kb on - strand at 1367.453 kb on - strand at 1367.467 kb on + strand at 1367.467 kb on + strand at 1367.467 kb on + strand at 1367.467 kb on + strand at 1367.467 kb on + strand at 1367.467 kb on + strand at 1367.467 kb on + strand at 1367.468 kb on - strand at 1367.474 kb on + strand at 1367.475 kb on - strand at 1367.510 kb on + strand at 1367.510 kb on + strand at 1367.511 kb on - strand at 1367.511 kb on - strand at 1367.511 kb on - strand at 1367.529 kb on + strand at 1367.530 kb on - strand at 1367.531 kb on + strand at 1367.531 kb on + strand at 1367.532 kb on - strand at 1367.532 kb on - strand at 1367.650 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.894 kb on + strand, within PfGW456L13_1225 at 1367.895 kb on - strand, within PfGW456L13_1225 at 1367.895 kb on - strand, within PfGW456L13_1225 at 1367.895 kb on - strand, within PfGW456L13_1225 at 1367.895 kb on - strand, within PfGW456L13_1225 at 1367.895 kb on - strand, within PfGW456L13_1225 at 1367.895 kb on - strand, within PfGW456L13_1225 at 1367.895 kb on - strand, within PfGW456L13_1225 at 1367.938 kb on + strand at 1367.939 kb on - strand at 1367.939 kb on - strand at 1367.949 kb on - strand at 1367.985 kb on + strand at 1367.986 kb on - strand at 1367.986 kb on - strand at 1367.990 kb on + strand at 1367.990 kb on + strand at 1367.990 kb on + strand at 1367.990 kb on + strand at 1367.990 kb on + strand at 1367.991 kb on - strand at 1367.991 kb on - strand at 1367.991 kb on - strand at 1367.991 kb on - strand at 1367.991 kb on - strand at 1367.991 kb on - strand at 1367.991 kb on - strand at 1368.033 kb on + strand at 1368.034 kb on - strand at 1368.055 kb on + strand at 1368.132 kb on + strand at 1368.195 kb on + strand at 1368.195 kb on + strand at 1368.195 kb on + strand at 1368.195 kb on + strand at 1368.195 kb on + strand at 1368.196 kb on - strand at 1368.196 kb on - strand at 1368.196 kb on - strand at 1368.196 kb on - strand at 1368.196 kb on - strand at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.274 kb on + strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.275 kb on - strand, within PfGW456L13_1226 at 1368.287 kb on - strand, within PfGW456L13_1226 at 1368.316 kb on + strand, within PfGW456L13_1226 at 1368.316 kb on + strand, within PfGW456L13_1226 at 1368.316 kb on + strand, within PfGW456L13_1226 at 1368.317 kb on - strand, within PfGW456L13_1226 at 1368.317 kb on - strand, within PfGW456L13_1226 at 1368.317 kb on - strand, within PfGW456L13_1226 at 1368.317 kb on - strand, within PfGW456L13_1226 at 1368.325 kb on + strand, within PfGW456L13_1226 at 1368.325 kb on + strand, within PfGW456L13_1226 at 1368.326 kb on - strand, within PfGW456L13_1226 at 1368.326 kb on - strand, within PfGW456L13_1226 at 1368.334 kb on - strand, within PfGW456L13_1226 at 1368.334 kb on - strand, within PfGW456L13_1226 at 1368.334 kb on - strand, within PfGW456L13_1226 at 1368.340 kb on + strand, within PfGW456L13_1226 at 1368.340 kb on + strand, within PfGW456L13_1226 at 1368.340 kb on + strand, within PfGW456L13_1226 at 1368.340 kb on + strand, within PfGW456L13_1226 at 1368.341 kb on - strand, within PfGW456L13_1226 at 1368.341 kb on - strand, within PfGW456L13_1226 at 1368.341 kb on - strand, within PfGW456L13_1226 at 1368.341 kb on - strand, within PfGW456L13_1226 at 1368.385 kb on - strand, within PfGW456L13_1226 at 1368.424 kb on + strand, within PfGW456L13_1226 at 1368.424 kb on + strand, within PfGW456L13_1226 at 1368.425 kb on - strand, within PfGW456L13_1226 at 1368.425 kb on - strand, within PfGW456L13_1226 at 1368.707 kb on - strand, within PfGW456L13_1226 at 1368.784 kb on + strand, within PfGW456L13_1226 at 1368.784 kb on + strand, within PfGW456L13_1226 at 1368.784 kb on + strand, within PfGW456L13_1226 at 1368.785 kb on - strand, within PfGW456L13_1226 at 1368.785 kb on - strand, within PfGW456L13_1226 at 1368.785 kb on - strand, within PfGW456L13_1226 at 1368.785 kb on - strand, within PfGW456L13_1226 at 1368.785 kb on - strand, within PfGW456L13_1226 at 1368.785 kb on - strand, within PfGW456L13_1226 at 1368.785 kb on - strand, within PfGW456L13_1226 at 1368.802 kb on + strand, within PfGW456L13_1226 at 1368.802 kb on + strand, within PfGW456L13_1226 at 1368.802 kb on + strand, within PfGW456L13_1226 at 1368.802 kb on + strand, within PfGW456L13_1226 at 1368.802 kb on + strand, within PfGW456L13_1226 at 1368.802 kb on + strand, within PfGW456L13_1226 at 1368.802 kb on + strand, within PfGW456L13_1226 at 1368.802 kb on + strand, within PfGW456L13_1226 at 1368.803 kb on - strand, within PfGW456L13_1226 at 1368.803 kb on - strand, within PfGW456L13_1226 at 1368.803 kb on - strand, within PfGW456L13_1226 at 1368.803 kb on - strand, within PfGW456L13_1226 at 1368.811 kb on + strand, within PfGW456L13_1226 at 1368.835 kb on + strand, within PfGW456L13_1226 at 1368.836 kb on - strand, within PfGW456L13_1226 at 1368.888 kb on + strand, within PfGW456L13_1226 at 1368.889 kb on - strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.892 kb on + strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.893 kb on - strand, within PfGW456L13_1226 at 1368.993 kb on + strand at 1369.072 kb on - strand at 1369.072 kb on - strand at 1369.072 kb on - strand at 1369.072 kb on - strand at 1369.861 kb on + strand at 1369.862 kb on - strand at 1369.992 kb on + strand at 1369.992 kb on + strand at 1369.992 kb on + strand at 1369.992 kb on + strand at 1369.992 kb on + strand at 1369.992 kb on + strand at 1369.992 kb on + strand at 1369.993 kb on - strand at 1369.993 kb on - strand at 1369.993 kb on - strand at 1369.993 kb on - strand at 1369.993 kb on - strand at 1369.993 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Histidine (N) remove 1,367,292 + +0.7 1,367,293 - +0.4 1,367,293 - +0.1 1,367,293 - -0.3 1,367,293 - -0.7 1,367,307 + -0.3 1,367,344 + +0.1 1,367,372 + +0.0 1,367,372 + -0.3 1,367,373 - -0.2 1,367,373 - +0.5 1,367,384 - +0.6 1,367,384 - +1.2 1,367,384 - +0.3 1,367,384 - -0.0 1,367,417 + +0.3 1,367,436 + +0.2 1,367,437 - -0.4 1,367,448 + -0.4 1,367,448 + +0.8 1,367,448 + +1.1 1,367,448 + -0.5 1,367,448 + -0.5 1,367,448 + +0.0 1,367,448 + -0.3 1,367,448 + -0.8 1,367,449 - -0.5 1,367,452 + -0.0 1,367,452 + -0.5 1,367,452 + +0.4 1,367,452 + +0.3 1,367,452 + -1.6 1,367,453 - +0.3 1,367,453 - -0.3 1,367,453 - +0.6 1,367,453 - -0.8 1,367,467 + -0.1 1,367,467 + -0.2 1,367,467 + +0.9 1,367,467 + +1.4 1,367,467 + +0.9 1,367,467 + +0.0 1,367,467 + +0.5 1,367,468 - -1.0 1,367,474 + +0.2 1,367,475 - +1.3 1,367,510 + +0.6 1,367,510 + +0.4 1,367,511 - +0.2 1,367,511 - +0.8 1,367,511 - -0.6 1,367,529 + +0.2 1,367,530 - +0.1 1,367,531 + +0.4 1,367,531 + -1.1 1,367,532 - +0.2 1,367,532 - +0.8 1,367,650 + PfGW456L13_1225 0.24 -0.9 1,367,894 + PfGW456L13_1225 0.82 -0.7 1,367,894 + PfGW456L13_1225 0.82 +1.5 1,367,894 + PfGW456L13_1225 0.82 -0.1 1,367,894 + PfGW456L13_1225 0.82 -0.8 1,367,894 + PfGW456L13_1225 0.82 +0.2 1,367,894 + PfGW456L13_1225 0.82 +0.3 1,367,894 + PfGW456L13_1225 0.82 -0.7 1,367,894 + PfGW456L13_1225 0.82 +0.6 1,367,894 + PfGW456L13_1225 0.82 -0.4 1,367,894 + PfGW456L13_1225 0.82 -2.1 1,367,894 + PfGW456L13_1225 0.82 +0.5 1,367,895 - PfGW456L13_1225 0.82 -0.7 1,367,895 - PfGW456L13_1225 0.82 -1.2 1,367,895 - PfGW456L13_1225 0.82 -1.0 1,367,895 - PfGW456L13_1225 0.82 +0.3 1,367,895 - PfGW456L13_1225 0.82 +1.3 1,367,895 - PfGW456L13_1225 0.82 +0.8 1,367,895 - PfGW456L13_1225 0.82 +0.0 1,367,938 + -0.8 1,367,939 - -0.4 1,367,939 - -0.8 1,367,949 - +1.0 1,367,985 + -1.0 1,367,986 - +0.2 1,367,986 - -0.4 1,367,990 + -0.6 1,367,990 + +0.0 1,367,990 + +0.7 1,367,990 + -0.3 1,367,990 + +0.2 1,367,991 - +0.1 1,367,991 - -1.6 1,367,991 - +0.2 1,367,991 - +0.2 1,367,991 - +0.6 1,367,991 - -0.3 1,367,991 - -0.1 1,368,033 + -0.7 1,368,034 - -0.2 1,368,055 + +0.1 1,368,132 + +0.6 1,368,195 + -0.6 1,368,195 + +0.9 1,368,195 + -0.0 1,368,195 + -0.0 1,368,195 + +0.2 1,368,196 - -0.8 1,368,196 - -0.7 1,368,196 - -0.1 1,368,196 - -1.7 1,368,196 - -1.0 1,368,274 + PfGW456L13_1226 0.13 +0.9 1,368,274 + PfGW456L13_1226 0.13 -0.6 1,368,274 + PfGW456L13_1226 0.13 -0.3 1,368,274 + PfGW456L13_1226 0.13 +0.6 1,368,274 + PfGW456L13_1226 0.13 -3.1 1,368,274 + PfGW456L13_1226 0.13 +0.9 1,368,274 + PfGW456L13_1226 0.13 -0.0 1,368,274 + PfGW456L13_1226 0.13 -0.6 1,368,274 + PfGW456L13_1226 0.13 -1.3 1,368,274 + PfGW456L13_1226 0.13 -0.8 1,368,274 + PfGW456L13_1226 0.13 -1.8 1,368,274 + PfGW456L13_1226 0.13 -1.4 1,368,274 + PfGW456L13_1226 0.13 -1.1 1,368,274 + PfGW456L13_1226 0.13 -0.6 1,368,274 + PfGW456L13_1226 0.13 -0.6 1,368,274 + PfGW456L13_1226 0.13 +0.0 1,368,274 + PfGW456L13_1226 0.13 +0.8 1,368,275 - PfGW456L13_1226 0.13 -0.9 1,368,275 - PfGW456L13_1226 0.13 -1.3 1,368,275 - PfGW456L13_1226 0.13 -0.1 1,368,275 - PfGW456L13_1226 0.13 -1.7 1,368,275 - PfGW456L13_1226 0.13 -1.4 1,368,275 - PfGW456L13_1226 0.13 -0.9 1,368,275 - PfGW456L13_1226 0.13 -0.3 1,368,275 - PfGW456L13_1226 0.13 -1.1 1,368,275 - PfGW456L13_1226 0.13 -1.6 1,368,275 - PfGW456L13_1226 0.13 -0.8 1,368,287 - PfGW456L13_1226 0.15 -0.4 1,368,316 + PfGW456L13_1226 0.18 +0.3 1,368,316 + PfGW456L13_1226 0.18 -0.0 1,368,316 + PfGW456L13_1226 0.18 -2.0 1,368,317 - PfGW456L13_1226 0.18 -1.2 1,368,317 - PfGW456L13_1226 0.18 -0.1 1,368,317 - PfGW456L13_1226 0.18 -2.1 1,368,317 - PfGW456L13_1226 0.18 -1.3 1,368,325 + PfGW456L13_1226 0.19 -1.7 1,368,325 + PfGW456L13_1226 0.19 -0.7 1,368,326 - PfGW456L13_1226 0.19 -1.2 1,368,326 - PfGW456L13_1226 0.19 -1.4 1,368,334 - PfGW456L13_1226 0.20 -2.8 1,368,334 - PfGW456L13_1226 0.20 -1.1 1,368,334 - PfGW456L13_1226 0.20 -2.2 1,368,340 + PfGW456L13_1226 0.21 -0.7 1,368,340 + PfGW456L13_1226 0.21 -2.7 1,368,340 + PfGW456L13_1226 0.21 -1.3 1,368,340 + PfGW456L13_1226 0.21 -0.7 1,368,341 - PfGW456L13_1226 0.21 -0.4 1,368,341 - PfGW456L13_1226 0.21 -1.5 1,368,341 - PfGW456L13_1226 0.21 -1.8 1,368,341 - PfGW456L13_1226 0.21 -1.6 1,368,385 - PfGW456L13_1226 0.26 -1.2 1,368,424 + PfGW456L13_1226 0.31 +0.6 1,368,424 + PfGW456L13_1226 0.31 -3.2 1,368,425 - PfGW456L13_1226 0.31 -1.4 1,368,425 - PfGW456L13_1226 0.31 -0.3 1,368,707 - PfGW456L13_1226 0.65 -1.6 1,368,784 + PfGW456L13_1226 0.74 -1.0 1,368,784 + PfGW456L13_1226 0.74 -1.2 1,368,784 + PfGW456L13_1226 0.74 -0.7 1,368,785 - PfGW456L13_1226 0.74 -0.9 1,368,785 - PfGW456L13_1226 0.74 -1.4 1,368,785 - PfGW456L13_1226 0.74 -0.6 1,368,785 - PfGW456L13_1226 0.74 +0.2 1,368,785 - PfGW456L13_1226 0.74 -1.0 1,368,785 - PfGW456L13_1226 0.74 -0.4 1,368,785 - PfGW456L13_1226 0.74 -0.5 1,368,802 + PfGW456L13_1226 0.76 -0.4 1,368,802 + PfGW456L13_1226 0.76 -0.9 1,368,802 + PfGW456L13_1226 0.76 -1.5 1,368,802 + PfGW456L13_1226 0.76 -0.2 1,368,802 + PfGW456L13_1226 0.76 -0.4 1,368,802 + PfGW456L13_1226 0.76 +1.6 1,368,802 + PfGW456L13_1226 0.76 -0.5 1,368,802 + PfGW456L13_1226 0.76 -1.6 1,368,803 - PfGW456L13_1226 0.76 -1.3 1,368,803 - PfGW456L13_1226 0.76 -2.5 1,368,803 - PfGW456L13_1226 0.76 -0.6 1,368,803 - PfGW456L13_1226 0.76 -1.7 1,368,811 + PfGW456L13_1226 0.77 -1.1 1,368,835 + PfGW456L13_1226 0.80 -1.7 1,368,836 - PfGW456L13_1226 0.80 -2.6 1,368,888 + PfGW456L13_1226 0.86 -1.5 1,368,889 - PfGW456L13_1226 0.86 +0.5 1,368,892 + PfGW456L13_1226 0.87 -0.1 1,368,892 + PfGW456L13_1226 0.87 -0.6 1,368,892 + PfGW456L13_1226 0.87 -0.8 1,368,892 + PfGW456L13_1226 0.87 +0.1 1,368,892 + PfGW456L13_1226 0.87 -1.6 1,368,892 + PfGW456L13_1226 0.87 -1.0 1,368,892 + PfGW456L13_1226 0.87 -1.6 1,368,892 + PfGW456L13_1226 0.87 -0.4 1,368,892 + PfGW456L13_1226 0.87 -0.5 1,368,892 + PfGW456L13_1226 0.87 -0.7 1,368,892 + PfGW456L13_1226 0.87 +0.4 1,368,893 - PfGW456L13_1226 0.87 -1.0 1,368,893 - PfGW456L13_1226 0.87 -0.4 1,368,893 - PfGW456L13_1226 0.87 -0.8 1,368,893 - PfGW456L13_1226 0.87 -1.0 1,368,893 - PfGW456L13_1226 0.87 -1.1 1,368,893 - PfGW456L13_1226 0.87 -0.6 1,368,893 - PfGW456L13_1226 0.87 +0.6 1,368,893 - PfGW456L13_1226 0.87 -0.9 1,368,893 - PfGW456L13_1226 0.87 +0.4 1,368,893 - PfGW456L13_1226 0.87 -2.3 1,368,893 - PfGW456L13_1226 0.87 -2.0 1,368,893 - PfGW456L13_1226 0.87 -1.0 1,368,893 - PfGW456L13_1226 0.87 -1.3 1,368,893 - PfGW456L13_1226 0.87 -0.5 1,368,893 - PfGW456L13_1226 0.87 -1.6 1,368,993 + -1.2 1,369,072 - -0.6 1,369,072 - +0.4 1,369,072 - -0.1 1,369,072 - -0.4 1,369,861 + -1.1 1,369,862 - +0.3 1,369,992 + +1.1 1,369,992 + -0.4 1,369,992 + +0.3 1,369,992 + +0.2 1,369,992 + +0.0 1,369,992 + +0.9 1,369,992 + +0.1 1,369,993 - +0.7 1,369,993 - -1.0 1,369,993 - -0.8 1,369,993 - -0.6 1,369,993 - +0.7 1,369,993 - -0.2
Or see this region's nucleotide sequence