Strain Fitness in Pseudomonas sp. RS175 around PFR28_02648

Experiment: Vanillic Acid (C) 2.5 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vanillic Acid (C) 2.5 mM
3,128,598	+		PFR28_02646	0.13	+0.1
3,128,598	+		PFR28_02646	0.13	-0.4
3,128,598	+		PFR28_02646	0.13	-0.6
3,128,598	+		PFR28_02646	0.13	-0.2
3,128,598	+		PFR28_02646	0.13	-0.4
3,128,598	+		PFR28_02646	0.13	+0.1
3,128,598	+		PFR28_02646	0.13	-2.8
3,128,598	+		PFR28_02646	0.13	+1.2
3,128,598	+		PFR28_02646	0.13	-0.9
3,128,598	+		PFR28_02646	0.13	-1.1
3,128,598	+		PFR28_02646	0.13	-0.1
3,128,598	+		PFR28_02646	0.13	+1.3
3,128,598	+		PFR28_02646	0.13	-0.4
3,128,598	+		PFR28_02646	0.13	-1.0
3,128,598	+		PFR28_02646	0.13	+1.8
3,128,598	+		PFR28_02646	0.13	-1.4
3,128,598	+		PFR28_02646	0.13	-0.4
3,128,599	-		PFR28_02646	0.13	-0.7
3,128,599	-		PFR28_02646	0.13	+1.3
3,128,599	-		PFR28_02646	0.13	-0.4
3,128,599	-		PFR28_02646	0.13	+0.4
3,128,599	-		PFR28_02646	0.13	-0.1
3,128,599	-		PFR28_02646	0.13	+0.9
3,128,599	-		PFR28_02646	0.13	-0.4
3,128,599	-		PFR28_02646	0.13	-0.6
3,128,599	-		PFR28_02646	0.13	-0.6
3,128,599	-		PFR28_02646	0.13	+4.5
3,128,599	-		PFR28_02646	0.13	+0.3
3,128,599	-		PFR28_02646	0.13	+1.9
3,128,599	-		PFR28_02646	0.13	+0.5
3,128,599	-		PFR28_02646	0.13	+0.5
3,128,599	-		PFR28_02646	0.13	-0.7
3,128,599	-		PFR28_02646	0.13	+0.8
3,128,599	-		PFR28_02646	0.13	+1.3
3,128,599	-		PFR28_02646	0.13	+0.4
3,128,599	-		PFR28_02646	0.13	+0.9
3,128,599	-		PFR28_02646	0.13	+1.0
3,128,602	+		PFR28_02646	0.14	+1.7
3,128,602	+		PFR28_02646	0.14	+0.6
3,128,602	+		PFR28_02646	0.14	+0.8
3,128,602	+		PFR28_02646	0.14	-1.7
3,128,602	+		PFR28_02646	0.14	-0.6
3,128,602	+		PFR28_02646	0.14	+1.1
3,128,602	+		PFR28_02646	0.14	+0.0
3,128,602	+		PFR28_02646	0.14	-0.9
3,128,602	+		PFR28_02646	0.14	+0.4
3,128,602	+		PFR28_02646	0.14	-0.9
3,128,602	+		PFR28_02646	0.14	-0.4
3,128,603	-		PFR28_02646	0.14	-1.2
3,128,603	-		PFR28_02646	0.14	-0.0
3,128,603	-		PFR28_02646	0.14	+1.1
3,128,603	-		PFR28_02646	0.14	+1.9
3,128,603	-		PFR28_02646	0.14	-0.0
3,128,603	-		PFR28_02646	0.14	-0.1
3,128,653	+		PFR28_02646	0.22	-0.4
3,128,653	+		PFR28_02646	0.22	+0.3
3,128,653	+		PFR28_02646	0.22	+0.3
3,128,653	+		PFR28_02646	0.22	+0.7
3,128,653	+		PFR28_02646	0.22	+0.8
3,128,653	+		PFR28_02646	0.22	-2.9
3,128,653	+		PFR28_02646	0.22	+0.1
3,128,654	-		PFR28_02646	0.22	+3.3
3,128,654	-		PFR28_02646	0.22	-2.2
3,128,654	-		PFR28_02646	0.22	-0.6
3,128,654	-		PFR28_02646	0.22	-2.3
3,128,654	-		PFR28_02646	0.22	+0.3
3,128,654	-		PFR28_02646	0.22	+0.3
3,128,654	-		PFR28_02646	0.22	-1.7
3,128,654	-		PFR28_02646	0.22	+0.3
3,129,446	+		PFR28_02647	0.73	-0.7
3,129,757	+		PFR28_02648	0.22	-0.8
3,129,928	+		PFR28_02648	0.40	+0.2
3,129,928	+		PFR28_02648	0.40	-0.5
3,129,929	-		PFR28_02648	0.40	-1.2
3,130,034	-		PFR28_02648	0.51	+1.1
3,130,034	-		PFR28_02648	0.51	+0.4
3,130,034	-		PFR28_02648	0.51	-0.4
3,130,503	+				-1.5
3,130,504	-				+1.1
3,130,887	+		PFR28_02649	0.29	-0.0
3,130,887	+		PFR28_02649	0.29	+0.3
3,130,887	+		PFR28_02649	0.29	+0.3
3,130,888	-		PFR28_02649	0.29	+0.1
3,131,001	+		PFR28_02649	0.43	+0.3
3,131,001	+		PFR28_02649	0.43	-0.9
3,131,001	+		PFR28_02649	0.43	-0.4
3,131,001	+		PFR28_02649	0.43	-0.6
3,131,001	+		PFR28_02649	0.43	-1.6
3,131,001	+		PFR28_02649	0.43	-0.7
3,131,001	+		PFR28_02649	0.43	-1.2
3,131,001	+		PFR28_02649	0.43	-0.2
3,131,001	+		PFR28_02649	0.43	+0.2
3,131,002	-		PFR28_02649	0.43	+2.2
3,131,002	-		PFR28_02649	0.43	+1.1
3,131,002	-		PFR28_02649	0.43	+0.6
3,131,002	-		PFR28_02649	0.43	-0.5
3,131,002	-		PFR28_02649	0.43	+0.2
3,131,002	-		PFR28_02649	0.43	-0.6
3,131,002	-		PFR28_02649	0.43	-0.8
3,131,002	-		PFR28_02649	0.43	-0.9
3,131,002	-		PFR28_02649	0.43	+0.9
3,131,002	-		PFR28_02649	0.43	+1.1
3,131,002	-		PFR28_02649	0.43	-0.3
3,131,002	-		PFR28_02649	0.43	-2.1
3,131,002	-		PFR28_02649	0.43	-2.0
3,131,002	-		PFR28_02649	0.43	-2.2
3,131,002	-		PFR28_02649	0.43	-0.8
3,131,002	-		PFR28_02649	0.43	-0.4
3,131,002	-		PFR28_02649	0.43	-0.7
3,131,002	-		PFR28_02649	0.43	-2.6
3,131,003	+		PFR28_02649	0.43	-0.4
3,131,003	+		PFR28_02649	0.43	+0.8
3,131,003	+		PFR28_02649	0.43	-1.1
3,131,003	+		PFR28_02649	0.43	+1.7
3,131,003	+		PFR28_02649	0.43	-1.2
3,131,003	+		PFR28_02649	0.43	+0.1
3,131,003	+		PFR28_02649	0.43	+0.1
3,131,004	-		PFR28_02649	0.44	-0.9
3,131,004	-		PFR28_02649	0.44	-0.3
3,131,004	-		PFR28_02649	0.44	-1.5
3,131,004	-		PFR28_02649	0.44	+1.1
3,131,004	-		PFR28_02649	0.44	-0.9
3,131,157	+		PFR28_02649	0.62	-1.4
3,131,158	-		PFR28_02649	0.62	-2.7
3,131,250	+		PFR28_02649	0.73	-0.6
3,131,250	+		PFR28_02649	0.73	-0.1
3,131,250	+		PFR28_02649	0.73	+0.3
3,131,250	+		PFR28_02649	0.73	-2.3
3,131,250	+		PFR28_02649	0.73	-1.4
3,131,251	-		PFR28_02649	0.74	-1.4
3,131,251	-		PFR28_02649	0.74	+1.9
3,131,251	-		PFR28_02649	0.74	+1.0
3,131,251	-		PFR28_02649	0.74	-0.8
3,131,427	+				+0.1
3,131,427	+				-0.4
3,131,428	-				-0.2
3,131,428	-				-0.9
3,131,430	+				+0.1
3,131,430	+				+0.3
3,131,430	+				+1.0
3,131,430	+				+1.5
3,131,430	+				+0.5
3,131,430	+				+0.9
3,131,431	-				+0.9
3,131,431	-				-0.9
3,131,431	-				-1.4
3,131,431	-				-1.1
3,131,431	-				-1.2
3,131,489	+				+1.4
3,131,489	+				-1.5
3,131,489	+				+1.3
3,131,489	+				+0.8
3,131,489	+				-0.7
3,131,490	-				+1.3