Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4461

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
5,336,518	+				-0.3
5,336,532	+				+0.0
5,336,533	-				+0.6
5,336,533	-				+3.4
5,336,533	-				+0.1
5,336,533	-				+0.5
5,336,563	-				-0.9
5,336,563	-				-1.2
5,336,634	+		Echvi_4459	0.26	+0.3
5,336,635	-		Echvi_4459	0.26	+0.5
5,336,640	+		Echvi_4459	0.27	+1.3
5,336,686	-		Echvi_4459	0.40	-0.3
5,336,686	-		Echvi_4459	0.40	-0.6
5,336,846	+		Echvi_4459	0.86	-0.0
5,336,849	-		Echvi_4459	0.87	+0.0
5,336,930	+				+0.1
5,336,930	+				+0.9
5,336,995	+		Echvi_4460	0.17	-0.0
5,336,996	-		Echvi_4460	0.17	+1.2
5,337,017	-		Echvi_4460	0.20	-0.8
5,337,032	+		Echvi_4460	0.23	-0.6
5,337,033	-		Echvi_4460	0.23	-1.1
5,337,036	+		Echvi_4460	0.24	-0.2
5,337,036	+		Echvi_4460	0.24	+0.2
5,337,037	-		Echvi_4460	0.24	-1.7
5,337,073	+		Echvi_4460	0.30	-1.0
5,337,073	+		Echvi_4460	0.30	+0.5
5,337,073	+		Echvi_4460	0.30	-0.4
5,337,110	+		Echvi_4460	0.37	+1.4
5,337,128	-		Echvi_4460	0.40	-0.9
5,337,219	+		Echvi_4460	0.57	-0.1
5,337,219	+		Echvi_4460	0.57	+1.8
5,337,220	-		Echvi_4460	0.57	-0.5
5,337,269	+		Echvi_4460	0.65	+0.0
5,337,269	+		Echvi_4460	0.65	+0.2
5,337,269	+		Echvi_4460	0.65	-1.2
5,337,270	-		Echvi_4460	0.66	-0.4
5,337,291	-		Echvi_4460	0.69	+1.9
5,337,291	-		Echvi_4460	0.69	-1.3
5,337,310	+		Echvi_4460	0.73	-1.1
5,337,311	-		Echvi_4460	0.73	-0.5
5,337,317	-		Echvi_4460	0.74	-0.6
5,337,319	+		Echvi_4460	0.74	+4.5
5,337,347	-		Echvi_4460	0.79	-1.1
5,337,367	-		Echvi_4460	0.83	-0.3
5,337,396	-		Echvi_4460	0.88	-0.0
5,337,409	-				+0.4
5,337,412	+				-0.1
5,337,420	-				+0.7
5,337,457	+				-1.7
5,337,458	-				-1.1
5,337,463	-				+0.1
5,337,463	-				-0.5
5,337,485	+				-1.0
5,337,492	+				-1.0
5,337,531	+				-1.3
5,337,608	+		Echvi_4461	0.11	-0.7
5,337,608	+		Echvi_4461	0.11	-0.1
5,337,609	-		Echvi_4461	0.11	-1.4
5,337,641	+		Echvi_4461	0.14	-0.9
5,337,750	+		Echvi_4461	0.22	-1.1
5,337,751	-		Echvi_4461	0.22	+0.3
5,337,751	-		Echvi_4461	0.22	-1.1
5,337,830	+		Echvi_4461	0.28	-2.0
5,337,831	-		Echvi_4461	0.28	+1.7
5,337,883	-		Echvi_4461	0.32	+0.6
5,338,021	-		Echvi_4461	0.42	+0.2
5,338,032	+		Echvi_4461	0.43	-1.1
5,338,032	+		Echvi_4461	0.43	-0.4
5,338,055	+		Echvi_4461	0.44	+0.3
5,338,055	+		Echvi_4461	0.44	+0.2
5,338,077	+		Echvi_4461	0.46	-0.4
5,338,083	-		Echvi_4461	0.46	+0.4
5,338,139	-		Echvi_4461	0.51	-1.2
5,338,179	+		Echvi_4461	0.54	-0.9
5,338,179	+		Echvi_4461	0.54	-0.9
5,338,180	-		Echvi_4461	0.54	-0.1
5,338,214	-		Echvi_4461	0.56	-0.8
5,338,235	+		Echvi_4461	0.58	+1.3
5,338,325	+		Echvi_4461	0.64	-2.8
5,338,326	-		Echvi_4461	0.65	+0.2
5,338,341	+		Echvi_4461	0.66	+0.4
5,338,341	+		Echvi_4461	0.66	-0.6
5,338,343	+		Echvi_4461	0.66	-0.1
5,338,344	-		Echvi_4461	0.66	-2.5
5,338,362	-		Echvi_4461	0.67	+0.9
5,338,394	+		Echvi_4461	0.70	-1.7
5,338,395	-		Echvi_4461	0.70	+0.8
5,338,395	-		Echvi_4461	0.70	-0.7
5,338,398	+		Echvi_4461	0.70	-0.8
5,338,398	+		Echvi_4461	0.70	-1.3
5,338,398	+		Echvi_4461	0.70	-0.4
5,338,399	-		Echvi_4461	0.70	+1.1
5,338,421	+		Echvi_4461	0.72	-0.7
5,338,426	-		Echvi_4461	0.72	-0.3
5,338,428	+		Echvi_4461	0.72	+0.3
5,338,504	-		Echvi_4461	0.78	+0.1
5,338,520	+		Echvi_4461	0.79	+1.9
5,338,521	-		Echvi_4461	0.79	+0.3
5,338,549	-		Echvi_4461	0.81	-0.7
5,338,635	-		Echvi_4461	0.88	-0.9
5,338,635	-		Echvi_4461	0.88	+0.3
5,338,639	+		Echvi_4461	0.88	+0.6
5,338,640	-		Echvi_4461	0.88	-0.5
5,338,710	+				-0.8
5,338,711	-				+0.3
5,338,734	+				+0.1
5,338,761	-				-0.2
5,338,762	+				-0.1
5,338,762	+				-1.0
5,338,762	+				+0.9
5,338,762	+				-0.7
5,338,762	+				-1.4
5,338,762	+				-0.2
5,338,762	+				-1.9
5,338,763	-				+1.0
5,338,763	-				-2.4
5,338,763	-				+1.1
5,338,763	-				+1.6
5,338,763	-				-0.8
5,338,763	-				+0.9
5,338,763	-				+0.2
5,338,763	-				-0.2
5,338,763	-				+1.4
5,338,763	-				+1.2
5,338,763	-				+0.9
5,338,767	+				+1.3
5,338,767	+				-0.7
5,338,767	+				+0.8
5,338,768	-				-0.5
5,338,768	-				+1.0
5,338,856	-		Echvi_4462	0.19	-0.1
5,338,931	-		Echvi_4462	0.40	-0.2
5,338,974	-		Echvi_4462	0.52	+0.2
5,338,975	+		Echvi_4462	0.53	-0.5
5,338,975	+		Echvi_4462	0.53	-0.1
5,339,036	+		Echvi_4462	0.70	+0.5
5,339,038	+		Echvi_4462	0.70	-1.2
5,339,038	+		Echvi_4462	0.70	-1.8
5,339,041	+		Echvi_4462	0.71	+1.6
5,339,042	-		Echvi_4462	0.71	+0.1
5,339,101	+		Echvi_4462	0.88	-0.6
5,339,102	-		Echvi_4462	0.88	-0.2
5,339,107	+		Echvi_4462	0.90	-0.5
5,339,108	-				-1.2
5,339,110	+				+1.6
5,339,110	+				+0.3
5,339,110	+				-0.7
5,339,113	+				-0.5
5,339,133	-				+0.5
5,339,133	-				+0.2
5,339,133	-				+0.9
5,339,138	+				-0.4
5,339,169	+				-0.1
5,339,169	+				+0.4
5,339,177	+				+0.2
5,339,177	+				-0.5
5,339,177	+				-2.3
5,339,223	+		Echvi_4463	0.12	-0.5
5,339,236	-		Echvi_4463	0.13	-0.9
5,339,253	+		Echvi_4463	0.15	-0.3
5,339,280	-		Echvi_4463	0.18	-0.0
5,339,449	+		Echvi_4463	0.36	-0.6
5,339,472	-		Echvi_4463	0.38	-0.5
5,339,493	+		Echvi_4463	0.41	-0.8
5,339,501	-		Echvi_4463	0.42	-1.4
5,339,555	+		Echvi_4463	0.47	+0.1
5,339,555	+		Echvi_4463	0.47	+2.1
5,339,556	-		Echvi_4463	0.47	-0.4
5,339,640	+		Echvi_4463	0.56	-1.0
5,339,668	-		Echvi_4463	0.59	-0.0
5,339,670	+		Echvi_4463	0.60	+0.1
5,339,671	-		Echvi_4463	0.60	-0.8
5,339,679	+		Echvi_4463	0.61	+0.3
5,339,684	+		Echvi_4463	0.61	-0.3
5,339,685	-		Echvi_4463	0.61	-0.4
5,339,685	-		Echvi_4463	0.61	-0.2
5,339,685	-		Echvi_4463	0.61	+0.2
5,339,685	-		Echvi_4463	0.61	+0.1
5,339,686	+		Echvi_4463	0.61	-1.2
5,339,687	-		Echvi_4463	0.61	-0.5
5,339,717	+		Echvi_4463	0.65	+1.3
5,339,726	+		Echvi_4463	0.66	-1.1
5,339,727	-		Echvi_4463	0.66	+0.4
5,339,736	+		Echvi_4463	0.67	-0.7