Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3597

Experiment: Ammonium chloride (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Ammonium chloride (N)
4,266,284	+				-0.3
4,266,284	+				+0.2
4,266,285	-				-1.7
4,266,286	+				+0.6
4,266,286	+				+1.2
4,266,287	-				+0.2
4,266,287	-				+0.4
4,266,287	-				-1.4
4,266,291	+				-0.7
4,266,297	+				-1.8
4,266,307	-		Echvi_3595	0.10	+0.2
4,266,317	+		Echvi_3595	0.13	+1.3
4,266,342	+		Echvi_3595	0.18	-1.1
4,266,407	+		Echvi_3595	0.33	-0.9
4,266,453	+		Echvi_3595	0.43	-1.1
4,266,496	-		Echvi_3595	0.53	+0.4
4,266,593	+		Echvi_3595	0.75	-1.3
4,266,598	-		Echvi_3595	0.76	-1.8
4,266,648	+		Echvi_3595	0.87	+0.2
4,266,649	-		Echvi_3595	0.87	+0.9
4,266,691	+				-0.3
4,266,692	-				-1.7
4,266,692	-				+0.1
4,266,699	-				-0.3
4,266,699	-				-0.3
4,266,711	+				+1.6
4,266,874	+		Echvi_3596	0.38	+0.1
4,266,874	+		Echvi_3596	0.38	-0.5
4,266,875	-		Echvi_3596	0.38	-0.2
4,266,895	+		Echvi_3596	0.43	+4.2
4,266,896	-		Echvi_3596	0.43	+1.0
4,266,914	-		Echvi_3596	0.48	-3.2
4,266,914	-		Echvi_3596	0.48	-0.2
4,266,915	+		Echvi_3596	0.48	+1.4
4,266,915	+		Echvi_3596	0.48	+0.5
4,266,916	-		Echvi_3596	0.48	-0.5
4,266,916	-		Echvi_3596	0.48	+0.2
4,266,964	+		Echvi_3596	0.59	-1.9
4,266,965	-		Echvi_3596	0.59	+0.3
4,266,965	-		Echvi_3596	0.59	+0.1
4,267,003	+		Echvi_3596	0.68	-0.1
4,267,004	-		Echvi_3596	0.69	+0.3
4,267,008	+		Echvi_3596	0.69	-0.5
4,267,030	+		Echvi_3596	0.75	-2.3
4,267,030	+		Echvi_3596	0.75	-0.5
4,267,030	+		Echvi_3596	0.75	+0.6
4,267,030	+		Echvi_3596	0.75	-0.1
4,267,030	+		Echvi_3596	0.75	+1.5
4,267,031	-		Echvi_3596	0.75	-0.6
4,267,067	+		Echvi_3596	0.83	-0.9
4,267,067	+		Echvi_3596	0.83	-0.5
4,267,068	-		Echvi_3596	0.83	-0.2
4,267,103	+				-0.8
4,267,156	+				-0.6
4,267,173	-				+1.1
4,267,175	+				-1.3
4,267,175	+				+0.4
4,267,176	-				+0.1
4,267,373	+				-1.2
4,267,390	-				-1.5
4,267,390	-				+0.9
4,267,390	-				-1.7
4,267,484	-		Echvi_3597	0.11	-0.9
4,267,546	+		Echvi_3597	0.14	-0.8
4,267,550	-		Echvi_3597	0.14	-0.5
4,267,573	-		Echvi_3597	0.16	+0.2
4,267,585	+		Echvi_3597	0.16	-0.1
4,267,585	+		Echvi_3597	0.16	+0.7
4,267,791	+		Echvi_3597	0.26	-0.7
4,267,791	+		Echvi_3597	0.26	+0.5
4,267,831	+		Echvi_3597	0.28	+0.3
4,267,858	+		Echvi_3597	0.29	-0.7
4,267,858	+		Echvi_3597	0.29	-0.6
4,267,867	+		Echvi_3597	0.30	-0.0
4,267,867	+		Echvi_3597	0.30	-1.1
4,267,886	+		Echvi_3597	0.31	-3.0
4,267,887	-		Echvi_3597	0.31	+0.7
4,267,887	-		Echvi_3597	0.31	-0.4
4,267,895	+		Echvi_3597	0.31	-0.8
4,267,896	-		Echvi_3597	0.31	+0.6
4,267,896	-		Echvi_3597	0.31	+0.5
4,267,909	+		Echvi_3597	0.32	+0.2
4,267,909	+		Echvi_3597	0.32	+1.2
4,267,921	+		Echvi_3597	0.32	-0.7
4,267,933	+		Echvi_3597	0.33	+0.7
4,267,957	+		Echvi_3597	0.34	-0.6
4,267,957	+		Echvi_3597	0.34	-0.4
4,268,005	+		Echvi_3597	0.36	-0.5
4,268,006	-		Echvi_3597	0.36	-1.6
4,268,030	+		Echvi_3597	0.37	+0.1
4,268,031	-		Echvi_3597	0.38	-1.1
4,268,037	+		Echvi_3597	0.38	+0.3
4,268,037	+		Echvi_3597	0.38	-1.7
4,268,038	-		Echvi_3597	0.38	-0.0
4,268,038	-		Echvi_3597	0.38	-2.2
4,268,038	-		Echvi_3597	0.38	-0.6
4,268,173	+		Echvi_3597	0.44	-0.1
4,268,173	+		Echvi_3597	0.44	-0.6
4,268,197	+		Echvi_3597	0.45	+0.3
4,268,198	-		Echvi_3597	0.46	+2.3
4,268,230	+		Echvi_3597	0.47	-0.6
4,268,239	+		Echvi_3597	0.48	+1.1
4,268,416	+		Echvi_3597	0.56	-0.1
4,268,416	+		Echvi_3597	0.56	-1.8
4,268,417	-		Echvi_3597	0.56	-0.5
4,268,429	-		Echvi_3597	0.57	-0.9
4,268,429	-		Echvi_3597	0.57	-0.3
4,268,429	-		Echvi_3597	0.57	-0.6
4,268,429	-		Echvi_3597	0.57	-0.7
4,268,471	-		Echvi_3597	0.59	-1.9
4,268,471	-		Echvi_3597	0.59	-0.9
4,268,500	+		Echvi_3597	0.60	+0.6
4,268,501	-		Echvi_3597	0.60	+1.0
4,268,563	+		Echvi_3597	0.63	+0.1
4,268,598	+		Echvi_3597	0.65	+0.2
4,268,603	+		Echvi_3597	0.65	+0.3
4,268,603	+		Echvi_3597	0.65	-0.9
4,268,604	-		Echvi_3597	0.65	-1.5
4,268,605	+		Echvi_3597	0.65	-2.1
4,268,628	+		Echvi_3597	0.66	-0.9
4,268,640	+		Echvi_3597	0.67	+0.9
4,268,640	+		Echvi_3597	0.67	-0.8
4,268,640	+		Echvi_3597	0.67	-0.5
4,268,640	+		Echvi_3597	0.67	-1.3
4,268,641	-		Echvi_3597	0.67	-0.3
4,268,641	-		Echvi_3597	0.67	-1.1
4,268,649	+		Echvi_3597	0.67	-1.3
4,268,716	+		Echvi_3597	0.70	+0.9
4,268,717	-		Echvi_3597	0.70	-1.6
4,268,718	+		Echvi_3597	0.71	-2.7
4,268,749	+		Echvi_3597	0.72	+0.7
4,268,749	+		Echvi_3597	0.72	+0.9
4,268,749	+		Echvi_3597	0.72	-0.1
4,268,749	+		Echvi_3597	0.72	-2.9
4,268,750	-		Echvi_3597	0.72	-1.1
4,268,750	-		Echvi_3597	0.72	-1.3
4,268,750	-		Echvi_3597	0.72	-0.9
4,268,750	-		Echvi_3597	0.72	-0.5
4,268,770	+		Echvi_3597	0.73	+0.4
4,268,771	-		Echvi_3597	0.73	+1.1
4,268,771	-		Echvi_3597	0.73	-1.3
4,268,771	-		Echvi_3597	0.73	+0.1
4,268,781	-		Echvi_3597	0.74	-2.4
4,268,793	+		Echvi_3597	0.74	-1.5
4,268,793	+		Echvi_3597	0.74	-0.0
4,268,802	+		Echvi_3597	0.75	+0.7
4,268,803	-		Echvi_3597	0.75	-1.2
4,268,846	+		Echvi_3597	0.77	-0.1
4,268,846	+		Echvi_3597	0.77	-0.4
4,268,846	+		Echvi_3597	0.77	-2.1
4,268,855	-		Echvi_3597	0.77	+0.4
4,268,923	+		Echvi_3597	0.80	-0.7
4,268,924	-		Echvi_3597	0.80	-0.8
4,268,946	+		Echvi_3597	0.81	-0.5
4,268,947	-		Echvi_3597	0.82	-0.4
4,268,947	-		Echvi_3597	0.82	-0.7
4,268,947	-		Echvi_3597	0.82	-1.0
4,268,947	-		Echvi_3597	0.82	+0.7
4,268,947	-		Echvi_3597	0.82	+1.7
4,268,947	-		Echvi_3597	0.82	-0.6
4,268,960	+		Echvi_3597	0.82	-1.2
4,268,967	+		Echvi_3597	0.82	-0.0
4,268,967	+		Echvi_3597	0.82	+0.0
4,268,968	-		Echvi_3597	0.83	-0.2
4,268,968	-		Echvi_3597	0.83	+0.1
4,269,009	+		Echvi_3597	0.84	-0.3
4,269,009	+		Echvi_3597	0.84	+0.4
4,269,010	-		Echvi_3597	0.85	-0.4
4,269,010	-		Echvi_3597	0.85	-0.9
4,269,010	-		Echvi_3597	0.85	-0.4
4,269,010	-		Echvi_3597	0.85	-0.7
4,269,012	+		Echvi_3597	0.85	-0.0
4,269,012	+		Echvi_3597	0.85	-1.5
4,269,013	-		Echvi_3597	0.85	-0.8
4,269,013	-		Echvi_3597	0.85	+0.4
4,269,022	-		Echvi_3597	0.85	+0.4
4,269,022	-		Echvi_3597	0.85	-0.9
4,269,032	+		Echvi_3597	0.86	+1.4
4,269,032	+		Echvi_3597	0.86	-0.6
4,269,053	+		Echvi_3597	0.87	+0.7
4,269,053	+		Echvi_3597	0.87	+0.3
4,269,053	+		Echvi_3597	0.87	+0.6
4,269,053	+		Echvi_3597	0.87	-1.8
4,269,077	+		Echvi_3597	0.88	-0.2
4,269,135	+				+0.0
4,269,136	-				-0.1
4,269,144	+				-0.4
4,269,144	+				-0.2
4,269,145	-				+2.2
4,269,177	-				+0.1
4,269,227	-				+0.3
4,269,229	-				-0.7
4,269,233	+				-0.9
4,269,233	+				-0.8
4,269,233	+				+0.3
4,269,234	-				-1.5
4,269,234	-				-1.1
4,269,235	+				-3.1
4,269,236	-				+0.5
4,269,257	+				-1.1
4,269,258	-				+0.1
4,269,296	+				-1.7
4,269,296	+				-1.2
4,269,300	+				+0.6
4,269,300	+				+0.5
4,269,300	+				-0.9
4,269,300	+				+0.1
4,269,301	-				-0.5
4,269,301	-				+1.1
4,269,317	-				+0.4
4,269,317	-				+0.5
4,269,317	-				+0.6
4,269,334	+				+1.7
4,269,370	+				-0.3
4,269,415	+				+0.6
4,269,417	+				+0.1
4,269,417	+				-0.3
4,269,417	+				+0.2
4,269,421	+				+0.3
4,269,421	+				-0.2
4,269,474	+		Echvi_3598	0.15	-0.3
4,269,474	+		Echvi_3598	0.15	+1.0
4,269,474	+		Echvi_3598	0.15	+1.2
4,269,532	+		Echvi_3598	0.22	-0.5
4,269,539	-		Echvi_3598	0.23	-0.9
4,269,541	-		Echvi_3598	0.23	+0.4
4,269,541	-		Echvi_3598	0.23	-2.3
4,269,599	+		Echvi_3598	0.30	-0.8
4,269,613	+		Echvi_3598	0.31	-0.9
4,269,698	+		Echvi_3598	0.41	+1.0
4,269,718	+		Echvi_3598	0.43	-0.6
4,269,806	+		Echvi_3598	0.54	-1.3
4,269,807	-		Echvi_3598	0.54	+0.2
4,269,817	+		Echvi_3598	0.55	+0.9
4,269,829	-		Echvi_3598	0.56	+2.4
4,269,861	+		Echvi_3598	0.60	-1.7
4,269,861	+		Echvi_3598	0.60	+0.2
4,269,861	+		Echvi_3598	0.60	-2.7
4,269,862	-		Echvi_3598	0.60	-1.7
4,269,862	-		Echvi_3598	0.60	-0.3
4,269,862	-		Echvi_3598	0.60	-1.9
4,269,862	-		Echvi_3598	0.60	-0.2
4,269,895	+		Echvi_3598	0.64	-0.4
4,269,896	-		Echvi_3598	0.64	+0.3
4,269,928	+		Echvi_3598	0.68	-0.4
4,269,994	+		Echvi_3598	0.75	-1.4
4,269,994	+		Echvi_3598	0.75	-0.1
4,269,995	-		Echvi_3598	0.76	+0.2
4,269,995	-		Echvi_3598	0.76	-1.0
4,269,995	-		Echvi_3598	0.76	-1.4
4,270,054	+		Echvi_3598	0.82	-0.1
4,270,109	-		Echvi_3598	0.89	-1.7
4,270,109	-		Echvi_3598	0.89	-0.2
4,270,112	+		Echvi_3598	0.89	-0.7
4,270,114	+		Echvi_3598	0.89	+0.3
4,270,147	+				+0.1
4,270,147	+				-1.7
4,270,147	+				+0.1
4,270,152	+				-1.9
4,270,161	-				-2.8
4,270,179	+				+0.7
4,270,183	+				+1.4
4,270,215	-				-1.2
4,270,215	-				-0.6
4,270,215	-				-0.5
4,270,215	-				+0.5
4,270,222	-				+1.1
4,270,226	-				-0.9
4,270,234	-				+0.1
4,270,260	+				+0.1
4,270,260	+				-0.2