Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_742 and PfGW456L13_743 are separated by 180 nucleotides PfGW456L13_743 and PfGW456L13_744 are separated by 63 nucleotides PfGW456L13_744 and PfGW456L13_745 are separated by 612 nucleotides
PfGW456L13_742 - Aspartate ammonia-lyase (EC 4.3.1.1), at 846,225 to 847,649
_742
PfGW456L13_743 - Transcriptional regulator, at 847,830 to 848,741
_743
PfGW456L13_744 - hypothetical protein, at 848,805 to 848,960
_744
PfGW456L13_745 - hypothetical protein, at 849,573 to 849,689
_745
Position (kb) 847
848
849 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 846.895 kb on - strand, within PfGW456L13_742 at 846.911 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.256 kb on - strand, within PfGW456L13_742 at 847.262 kb on - strand, within PfGW456L13_742 at 847.262 kb on - strand, within PfGW456L13_742 at 847.548 kb on - strand at 847.548 kb on - strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.576 kb on + strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.577 kb on - strand at 847.579 kb on + strand at 847.580 kb on - strand at 847.580 kb on - strand at 847.580 kb on - strand at 847.653 kb on - strand at 847.747 kb on - strand at 847.802 kb on + strand at 848.068 kb on + strand, within PfGW456L13_743 at 848.068 kb on + strand, within PfGW456L13_743 at 848.068 kb on + strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.069 kb on - strand, within PfGW456L13_743 at 848.277 kb on + strand, within PfGW456L13_743 at 848.278 kb on - strand, within PfGW456L13_743 at 848.278 kb on - strand, within PfGW456L13_743 at 848.427 kb on + strand, within PfGW456L13_743 at 848.502 kb on + strand, within PfGW456L13_743 at 848.503 kb on - strand, within PfGW456L13_743 at 848.887 kb on + strand, within PfGW456L13_744 at 848.888 kb on - strand, within PfGW456L13_744 at 848.893 kb on - strand, within PfGW456L13_744 at 848.961 kb on - strand at 848.996 kb on + strand at 848.996 kb on + strand at 849.050 kb on + strand at 849.080 kb on - strand at 849.266 kb on + strand at 849.286 kb on + strand at 849.368 kb on + strand at 849.371 kb on + strand at 849.373 kb on + strand at 849.450 kb on + strand at 849.450 kb on + strand at 849.451 kb on - strand at 849.454 kb on + strand at 849.454 kb on + strand at 849.455 kb on - strand at 849.489 kb on + strand at 849.489 kb on + strand at 849.554 kb on - strand at 849.554 kb on - strand at 849.688 kb on - strand at 849.707 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 846,895 - PfGW456L13_742 0.47 -1.5 846,911 - PfGW456L13_742 0.48 -0.6 847,256 - PfGW456L13_742 0.72 -0.8 847,256 - PfGW456L13_742 0.72 -1.1 847,256 - PfGW456L13_742 0.72 -1.6 847,262 - PfGW456L13_742 0.73 -1.0 847,262 - PfGW456L13_742 0.73 -2.6 847,548 - -2.2 847,548 - -2.5 847,576 + -1.3 847,576 + -0.8 847,576 + -1.1 847,576 + -1.4 847,576 + -0.0 847,577 - -2.4 847,577 - -1.1 847,577 - -0.6 847,577 - -1.6 847,577 - -0.2 847,577 - -2.9 847,579 + -1.8 847,580 - -1.0 847,580 - -1.5 847,580 - +0.8 847,653 - -1.6 847,747 - -1.1 847,802 + +0.1 848,068 + PfGW456L13_743 0.26 -0.3 848,068 + PfGW456L13_743 0.26 -2.2 848,068 + PfGW456L13_743 0.26 +0.0 848,069 - PfGW456L13_743 0.26 +0.5 848,069 - PfGW456L13_743 0.26 +0.1 848,069 - PfGW456L13_743 0.26 +0.3 848,069 - PfGW456L13_743 0.26 -0.1 848,069 - PfGW456L13_743 0.26 +0.5 848,069 - PfGW456L13_743 0.26 +0.0 848,069 - PfGW456L13_743 0.26 -0.2 848,069 - PfGW456L13_743 0.26 -1.0 848,277 + PfGW456L13_743 0.49 -0.9 848,278 - PfGW456L13_743 0.49 +0.2 848,278 - PfGW456L13_743 0.49 -1.0 848,427 + PfGW456L13_743 0.65 -1.9 848,502 + PfGW456L13_743 0.74 +0.4 848,503 - PfGW456L13_743 0.74 -0.3 848,887 + PfGW456L13_744 0.53 +1.1 848,888 - PfGW456L13_744 0.53 -1.8 848,893 - PfGW456L13_744 0.56 -0.0 848,961 - -0.2 848,996 + -0.5 848,996 + +0.3 849,050 + +0.1 849,080 - -0.4 849,266 + +0.7 849,286 + -0.9 849,368 + +0.4 849,371 + -0.2 849,373 + -1.4 849,450 + +0.1 849,450 + -0.2 849,451 - -0.1 849,454 + +0.3 849,454 + +1.0 849,455 - -0.8 849,489 + +0.3 849,489 + -0.9 849,554 - +1.4 849,554 - -1.1 849,688 - +0.1 849,707 + +1.6
Or see this region's nucleotide sequence