Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_4583 and PfGW456L13_4584 are separated by 121 nucleotides PfGW456L13_4584 and PfGW456L13_4585 are separated by 10 nucleotides PfGW456L13_4585 and PfGW456L13_4586 are separated by 12 nucleotides
PfGW456L13_4583 - PhaK-like protein, at 5,115,739 to 5,116,998
_4583
PfGW456L13_4584 - 4-carboxymuconolactone decarboxylase (EC 4.1.1.44), at 5,117,120 to 5,117,512
_4584
PfGW456L13_4585 - Beta-ketoadipate enol-lactone hydrolase (EC 3.1.1.24), at 5,117,523 to 5,118,314
_4585
PfGW456L13_4586 - 3-carboxy-cis,cis-muconate cycloisomerase (EC 5.5.1.2), at 5,118,327 to 5,119,691
_4586
Position (kb)
5117
5118
5119 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 5116.567 kb on + strand, within PfGW456L13_4583 at 5116.567 kb on + strand, within PfGW456L13_4583 at 5116.567 kb on + strand, within PfGW456L13_4583 at 5116.567 kb on + strand, within PfGW456L13_4583 at 5116.568 kb on - strand, within PfGW456L13_4583 at 5116.568 kb on - strand, within PfGW456L13_4583 at 5116.568 kb on - strand, within PfGW456L13_4583 at 5116.568 kb on - strand, within PfGW456L13_4583 at 5116.588 kb on + strand, within PfGW456L13_4583 at 5116.588 kb on + strand, within PfGW456L13_4583 at 5116.589 kb on - strand, within PfGW456L13_4583 at 5116.589 kb on - strand, within PfGW456L13_4583 at 5116.589 kb on - strand, within PfGW456L13_4583 at 5116.606 kb on + strand, within PfGW456L13_4583 at 5116.606 kb on + strand, within PfGW456L13_4583 at 5116.606 kb on + strand, within PfGW456L13_4583 at 5116.606 kb on + strand, within PfGW456L13_4583 at 5116.606 kb on + strand, within PfGW456L13_4583 at 5116.607 kb on - strand, within PfGW456L13_4583 at 5116.607 kb on - strand, within PfGW456L13_4583 at 5116.607 kb on - strand, within PfGW456L13_4583 at 5116.690 kb on + strand, within PfGW456L13_4583 at 5116.690 kb on + strand, within PfGW456L13_4583 at 5116.691 kb on - strand, within PfGW456L13_4583 at 5116.691 kb on - strand, within PfGW456L13_4583 at 5116.691 kb on - strand, within PfGW456L13_4583 at 5116.702 kb on + strand, within PfGW456L13_4583 at 5116.702 kb on + strand, within PfGW456L13_4583 at 5116.733 kb on + strand, within PfGW456L13_4583 at 5116.733 kb on + strand, within PfGW456L13_4583 at 5116.733 kb on + strand, within PfGW456L13_4583 at 5116.734 kb on - strand at 5116.744 kb on + strand, within PfGW456L13_4583 at 5116.744 kb on + strand, within PfGW456L13_4583 at 5116.744 kb on + strand, within PfGW456L13_4583 at 5116.744 kb on + strand, within PfGW456L13_4583 at 5116.745 kb on - strand, within PfGW456L13_4583 at 5116.745 kb on - strand, within PfGW456L13_4583 at 5116.792 kb on + strand, within PfGW456L13_4583 at 5116.792 kb on + strand, within PfGW456L13_4583 at 5116.792 kb on + strand, within PfGW456L13_4583 at 5116.792 kb on + strand, within PfGW456L13_4583 at 5116.792 kb on + strand, within PfGW456L13_4583 at 5116.868 kb on - strand, within PfGW456L13_4583 at 5116.936 kb on + strand at 5116.936 kb on + strand at 5116.944 kb on + strand at 5116.979 kb on - strand at 5116.996 kb on + strand at 5116.997 kb on - strand at 5116.997 kb on - strand at 5117.042 kb on + strand at 5117.042 kb on + strand at 5117.058 kb on + strand at 5117.058 kb on + strand at 5117.122 kb on - strand at 5117.202 kb on + strand, within PfGW456L13_4584 at 5117.202 kb on + strand, within PfGW456L13_4584 at 5117.202 kb on + strand, within PfGW456L13_4584 at 5117.202 kb on + strand, within PfGW456L13_4584 at 5117.202 kb on + strand, within PfGW456L13_4584 at 5117.203 kb on - strand, within PfGW456L13_4584 at 5117.203 kb on - strand, within PfGW456L13_4584 at 5117.494 kb on - strand at 5117.517 kb on + strand at 5117.518 kb on - strand at 5117.518 kb on - strand at 5117.599 kb on + strand at 5117.599 kb on + strand at 5117.599 kb on + strand at 5117.599 kb on + strand at 5117.765 kb on - strand, within PfGW456L13_4585 at 5117.799 kb on - strand, within PfGW456L13_4585 at 5118.113 kb on - strand, within PfGW456L13_4585 at 5118.113 kb on - strand, within PfGW456L13_4585 at 5118.113 kb on - strand, within PfGW456L13_4585 at 5118.277 kb on + strand at 5118.303 kb on + strand at 5118.303 kb on + strand at 5118.304 kb on - strand at 5118.304 kb on - strand at 5118.391 kb on + strand at 5118.391 kb on + strand at 5118.391 kb on + strand at 5118.392 kb on - strand at 5118.392 kb on - strand at 5118.921 kb on - strand, within PfGW456L13_4586 at 5119.253 kb on - strand, within PfGW456L13_4586
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 5,116,567 + PfGW456L13_4583 0.66 -0.6 5,116,567 + PfGW456L13_4583 0.66 -0.3 5,116,567 + PfGW456L13_4583 0.66 +0.0 5,116,567 + PfGW456L13_4583 0.66 -0.5 5,116,568 - PfGW456L13_4583 0.66 -0.1 5,116,568 - PfGW456L13_4583 0.66 -0.2 5,116,568 - PfGW456L13_4583 0.66 +0.2 5,116,568 - PfGW456L13_4583 0.66 +0.1 5,116,588 + PfGW456L13_4583 0.67 +1.6 5,116,588 + PfGW456L13_4583 0.67 -1.0 5,116,589 - PfGW456L13_4583 0.67 -0.3 5,116,589 - PfGW456L13_4583 0.67 +2.0 5,116,589 - PfGW456L13_4583 0.67 +0.6 5,116,606 + PfGW456L13_4583 0.69 -0.4 5,116,606 + PfGW456L13_4583 0.69 -0.2 5,116,606 + PfGW456L13_4583 0.69 +0.2 5,116,606 + PfGW456L13_4583 0.69 -0.9 5,116,606 + PfGW456L13_4583 0.69 +0.9 5,116,607 - PfGW456L13_4583 0.69 -0.1 5,116,607 - PfGW456L13_4583 0.69 +0.1 5,116,607 - PfGW456L13_4583 0.69 +0.1 5,116,690 + PfGW456L13_4583 0.75 +0.7 5,116,690 + PfGW456L13_4583 0.75 -0.1 5,116,691 - PfGW456L13_4583 0.76 -0.5 5,116,691 - PfGW456L13_4583 0.76 -0.6 5,116,691 - PfGW456L13_4583 0.76 -0.1 5,116,702 + PfGW456L13_4583 0.76 -0.6 5,116,702 + PfGW456L13_4583 0.76 -0.2 5,116,733 + PfGW456L13_4583 0.79 -0.0 5,116,733 + PfGW456L13_4583 0.79 +1.0 5,116,733 + PfGW456L13_4583 0.79 +0.4 5,116,734 - +1.1 5,116,744 + PfGW456L13_4583 0.80 -1.3 5,116,744 + PfGW456L13_4583 0.80 +0.5 5,116,744 + PfGW456L13_4583 0.80 -0.4 5,116,744 + PfGW456L13_4583 0.80 +0.3 5,116,745 - PfGW456L13_4583 0.80 +0.4 5,116,745 - PfGW456L13_4583 0.80 -0.4 5,116,792 + PfGW456L13_4583 0.84 -1.0 5,116,792 + PfGW456L13_4583 0.84 -0.0 5,116,792 + PfGW456L13_4583 0.84 +0.6 5,116,792 + PfGW456L13_4583 0.84 -0.7 5,116,792 + PfGW456L13_4583 0.84 -0.2 5,116,868 - PfGW456L13_4583 0.90 -0.1 5,116,936 + +0.4 5,116,936 + -0.0 5,116,944 + +0.1 5,116,979 - +0.4 5,116,996 + +0.3 5,116,997 - -0.8 5,116,997 - +0.8 5,117,042 + -0.7 5,117,042 + -0.7 5,117,058 + +0.3 5,117,058 + -0.6 5,117,122 - -1.1 5,117,202 + PfGW456L13_4584 0.21 +0.6 5,117,202 + PfGW456L13_4584 0.21 +1.2 5,117,202 + PfGW456L13_4584 0.21 -0.8 5,117,202 + PfGW456L13_4584 0.21 -0.4 5,117,202 + PfGW456L13_4584 0.21 -0.5 5,117,203 - PfGW456L13_4584 0.21 +0.8 5,117,203 - PfGW456L13_4584 0.21 -0.3 5,117,494 - -0.3 5,117,517 + +1.0 5,117,518 - -0.5 5,117,518 - -0.4 5,117,599 + +0.2 5,117,599 + -0.9 5,117,599 + -0.3 5,117,599 + +0.3 5,117,765 - PfGW456L13_4585 0.31 -1.9 5,117,799 - PfGW456L13_4585 0.35 -0.3 5,118,113 - PfGW456L13_4585 0.74 +0.4 5,118,113 - PfGW456L13_4585 0.74 -0.2 5,118,113 - PfGW456L13_4585 0.74 -0.0 5,118,277 + +0.7 5,118,303 + +0.6 5,118,303 + +0.6 5,118,304 - -1.0 5,118,304 - +0.5 5,118,391 + -0.1 5,118,391 + -0.2 5,118,391 + -0.1 5,118,392 - -0.5 5,118,392 - +0.3 5,118,921 - PfGW456L13_4586 0.44 -0.4 5,119,253 - PfGW456L13_4586 0.68 +1.5
Or see this region's nucleotide sequence