Experiment: L-Arginine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PfGW456L13_1365 and PfGW456L13_1366 overlap by 1 nucleotides PfGW456L13_1366 and PfGW456L13_1367 are separated by 1 nucleotides PfGW456L13_1367 and PfGW456L13_1368 are separated by 239 nucleotides
PfGW456L13_1365 - Proposed lipoate regulatory protein YbeD, at 1,510,208 to 1,510,483
_1365
PfGW456L13_1366 - Octanoate-[acyl-carrier-protein]-protein-N-octan oyltransferase, at 1,510,483 to 1,511,130
_1366
PfGW456L13_1367 - Lipoate synthase, at 1,511,132 to 1,512,154
_1367
PfGW456L13_1368 - Muramoyltetrapeptide carboxypeptidase (EC 3.4.17.13), at 1,512,394 to 1,513,278
_1368
Position (kb) 1511
1512
1513 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 1510.185 kb on + strand at 1510.185 kb on + strand at 1510.185 kb on + strand at 1510.191 kb on + strand at 1512.169 kb on + strand at 1512.170 kb on - strand at 1512.170 kb on - strand at 1512.170 kb on - strand at 1512.220 kb on - strand at 1512.220 kb on - strand at 1512.291 kb on - strand at 1512.291 kb on - strand at 1512.472 kb on + strand at 1512.782 kb on + strand, within PfGW456L13_1368 at 1512.782 kb on + strand, within PfGW456L13_1368 at 1512.782 kb on + strand, within PfGW456L13_1368 at 1512.782 kb on + strand, within PfGW456L13_1368 at 1512.782 kb on + strand, within PfGW456L13_1368 at 1512.782 kb on + strand, within PfGW456L13_1368 at 1512.782 kb on + strand, within PfGW456L13_1368 at 1512.786 kb on + strand, within PfGW456L13_1368 at 1512.787 kb on - strand, within PfGW456L13_1368
Per-strain Table
Position Strand Gene LocusTag Fraction L-Arginine (N) remove 1,510,185 + +0.6 1,510,185 + -0.4 1,510,185 + +0.2 1,510,191 + -0.4 1,512,169 + +0.8 1,512,170 - +0.7 1,512,170 - -0.5 1,512,170 - -0.6 1,512,220 - +0.2 1,512,220 - -0.2 1,512,291 - -1.0 1,512,291 - +1.0 1,512,472 + -1.9 1,512,782 + PfGW456L13_1368 0.44 -3.6 1,512,782 + PfGW456L13_1368 0.44 -3.7 1,512,782 + PfGW456L13_1368 0.44 -3.2 1,512,782 + PfGW456L13_1368 0.44 -2.6 1,512,782 + PfGW456L13_1368 0.44 -2.9 1,512,782 + PfGW456L13_1368 0.44 -4.5 1,512,782 + PfGW456L13_1368 0.44 -3.1 1,512,786 + PfGW456L13_1368 0.44 -3.9 1,512,787 - PfGW456L13_1368 0.44 -2.9
Or see this region's nucleotide sequence