Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2485

Experiment: m.b. Cholin acetate 15 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_2484 and B158DRAFT_2485 are separated by 325 nucleotidesB158DRAFT_2485 and B158DRAFT_2486 are separated by 72 nucleotidesB158DRAFT_2486 and B158DRAFT_2487 are separated by 161 nucleotides B158DRAFT_2484: B158DRAFT_2484 - Molecular chaperone, HSP90 family, at 667,096 to 669,000 _2484 B158DRAFT_2485: B158DRAFT_2485 - hypothetical protein, at 669,326 to 669,856 _2485 B158DRAFT_2486: B158DRAFT_2486 - Uncharacterized protein conserved in bacteria, at 669,929 to 670,585 _2486 B158DRAFT_2487: B158DRAFT_2487 - Predicted integral membrane protein, at 670,747 to 671,100 _2487 Position (kb) 669 670Strain fitness (log2 ratio) -2 -1 0 1 2at 668.329 kb on - strand, within B158DRAFT_2484at 668.347 kb on - strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.434 kb on + strand, within B158DRAFT_2484at 668.439 kb on + strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.442 kb on - strand, within B158DRAFT_2484at 668.444 kb on + strand, within B158DRAFT_2484at 668.526 kb on - strand, within B158DRAFT_2484at 668.563 kb on + strand, within B158DRAFT_2484at 668.596 kb on - strand, within B158DRAFT_2484at 668.702 kb on + strand, within B158DRAFT_2484at 668.702 kb on + strand, within B158DRAFT_2484at 668.710 kb on - strand, within B158DRAFT_2484at 668.712 kb on + strand, within B158DRAFT_2484at 668.735 kb on + strand, within B158DRAFT_2484at 668.740 kb on + strand, within B158DRAFT_2484at 668.797 kb on + strand, within B158DRAFT_2484at 668.805 kb on + strand, within B158DRAFT_2484at 668.805 kb on + strand, within B158DRAFT_2484at 668.805 kb on + strand, within B158DRAFT_2484at 668.805 kb on + strand, within B158DRAFT_2484at 668.805 kb on + strand, within B158DRAFT_2484at 668.805 kb on + strand, within B158DRAFT_2484at 668.813 kb on - strandat 668.813 kb on - strandat 668.813 kb on - strandat 668.836 kb on - strandat 668.836 kb on - strandat 668.938 kb on + strandat 668.954 kb on + strandat 669.232 kb on + strandat 669.240 kb on - strandat 669.340 kb on + strandat 669.340 kb on + strandat 669.348 kb on - strandat 669.480 kb on + strand, within B158DRAFT_2485at 669.503 kb on + strand, within B158DRAFT_2485at 669.510 kb on + strand, within B158DRAFT_2485at 669.518 kb on - strand, within B158DRAFT_2485at 669.518 kb on - strand, within B158DRAFT_2485at 669.527 kb on - strand, within B158DRAFT_2485at 669.560 kb on + strand, within B158DRAFT_2485at 669.630 kb on + strand, within B158DRAFT_2485at 669.631 kb on + strand, within B158DRAFT_2485at 669.649 kb on - strand, within B158DRAFT_2485at 669.737 kb on + strand, within B158DRAFT_2485at 669.751 kb on - strand, within B158DRAFT_2485at 669.766 kb on - strand, within B158DRAFT_2485at 669.822 kb on + strandat 669.822 kb on + strandat 669.916 kb on - strandat 669.977 kb on + strandat 670.046 kb on + strand, within B158DRAFT_2486at 670.048 kb on + strand, within B158DRAFT_2486at 670.054 kb on + strand, within B158DRAFT_2486at 670.060 kb on - strand, within B158DRAFT_2486at 670.062 kb on - strand, within B158DRAFT_2486at 670.216 kb on - strand, within B158DRAFT_2486at 670.216 kb on - strand, within B158DRAFT_2486at 670.249 kb on + strand, within B158DRAFT_2486at 670.262 kb on + strand, within B158DRAFT_2486at 670.291 kb on + strand, within B158DRAFT_2486at 670.291 kb on + strand, within B158DRAFT_2486at 670.297 kb on + strand, within B158DRAFT_2486at 670.318 kb on + strand, within B158DRAFT_2486at 670.326 kb on - strand, within B158DRAFT_2486at 670.339 kb on - strand, within B158DRAFT_2486at 670.341 kb on + strand, within B158DRAFT_2486at 670.385 kb on + strand, within B158DRAFT_2486at 670.393 kb on - strand, within B158DRAFT_2486at 670.393 kb on - strand, within B158DRAFT_2486at 670.434 kb on + strand, within B158DRAFT_2486at 670.438 kb on - strand, within B158DRAFT_2486at 670.482 kb on + strand, within B158DRAFT_2486at 670.490 kb on - strand, within B158DRAFT_2486at 670.579 kb on + strandat 670.662 kb on + strandat 670.665 kb on - strandat 670.665 kb on - strandat 670.673 kb on - strandat 670.678 kb on - strandat 670.686 kb on + strandat 670.839 kb on - strand, within B158DRAFT_2487at 670.848 kb on + strand, within B158DRAFT_2487

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM
remove
668,329 - B158DRAFT_2484 0.65 -1.4
668,347 - B158DRAFT_2484 0.66 +0.0
668,434 + B158DRAFT_2484 0.70 -0.1
668,434 + B158DRAFT_2484 0.70 -1.0
668,434 + B158DRAFT_2484 0.70 -0.2
668,434 + B158DRAFT_2484 0.70 -0.8
668,434 + B158DRAFT_2484 0.70 -2.0
668,434 + B158DRAFT_2484 0.70 -1.1
668,434 + B158DRAFT_2484 0.70 -0.5
668,434 + B158DRAFT_2484 0.70 -0.4
668,434 + B158DRAFT_2484 0.70 -0.9
668,434 + B158DRAFT_2484 0.70 -0.2
668,434 + B158DRAFT_2484 0.70 +0.5
668,439 + B158DRAFT_2484 0.70 -0.4
668,442 - B158DRAFT_2484 0.71 -1.1
668,442 - B158DRAFT_2484 0.71 +1.3
668,442 - B158DRAFT_2484 0.71 -0.3
668,442 - B158DRAFT_2484 0.71 -0.7
668,442 - B158DRAFT_2484 0.71 +0.8
668,442 - B158DRAFT_2484 0.71 -0.3
668,442 - B158DRAFT_2484 0.71 -1.1
668,442 - B158DRAFT_2484 0.71 -0.6
668,442 - B158DRAFT_2484 0.71 +0.3
668,442 - B158DRAFT_2484 0.71 -0.9
668,442 - B158DRAFT_2484 0.71 -0.6
668,442 - B158DRAFT_2484 0.71 -1.9
668,442 - B158DRAFT_2484 0.71 -1.0
668,442 - B158DRAFT_2484 0.71 -0.7
668,442 - B158DRAFT_2484 0.71 -0.2
668,444 + B158DRAFT_2484 0.71 +2.1
668,526 - B158DRAFT_2484 0.75 -0.1
668,563 + B158DRAFT_2484 0.77 -0.5
668,596 - B158DRAFT_2484 0.79 -0.2
668,702 + B158DRAFT_2484 0.84 +0.0
668,702 + B158DRAFT_2484 0.84 -0.2
668,710 - B158DRAFT_2484 0.85 -0.1
668,712 + B158DRAFT_2484 0.85 -0.2
668,735 + B158DRAFT_2484 0.86 +0.2
668,740 + B158DRAFT_2484 0.86 +0.9
668,797 + B158DRAFT_2484 0.89 +0.1
668,805 + B158DRAFT_2484 0.90 +0.3
668,805 + B158DRAFT_2484 0.90 +1.0
668,805 + B158DRAFT_2484 0.90 -0.7
668,805 + B158DRAFT_2484 0.90 +0.7
668,805 + B158DRAFT_2484 0.90 -0.9
668,805 + B158DRAFT_2484 0.90 -1.0
668,813 - -1.6
668,813 - -0.9
668,813 - -1.0
668,836 - +0.5
668,836 - -0.7
668,938 + -1.7
668,954 + +0.4
669,232 + -0.3
669,240 - +1.0
669,340 + -0.9
669,340 + -0.1
669,348 - +0.7
669,480 + B158DRAFT_2485 0.29 +0.7
669,503 + B158DRAFT_2485 0.33 -1.5
669,510 + B158DRAFT_2485 0.35 -0.1
669,518 - B158DRAFT_2485 0.36 -1.2
669,518 - B158DRAFT_2485 0.36 -0.1
669,527 - B158DRAFT_2485 0.38 -0.3
669,560 + B158DRAFT_2485 0.44 -0.4
669,630 + B158DRAFT_2485 0.57 -0.5
669,631 + B158DRAFT_2485 0.57 +0.7
669,649 - B158DRAFT_2485 0.61 -0.6
669,737 + B158DRAFT_2485 0.77 -0.5
669,751 - B158DRAFT_2485 0.80 -0.4
669,766 - B158DRAFT_2485 0.83 -1.1
669,822 + -0.6
669,822 + +0.0
669,916 - -0.3
669,977 + -0.6
670,046 + B158DRAFT_2486 0.18 +0.0
670,048 + B158DRAFT_2486 0.18 -0.6
670,054 + B158DRAFT_2486 0.19 +1.3
670,060 - B158DRAFT_2486 0.20 +0.5
670,062 - B158DRAFT_2486 0.20 +0.0
670,216 - B158DRAFT_2486 0.44 -0.7
670,216 - B158DRAFT_2486 0.44 -0.9
670,249 + B158DRAFT_2486 0.49 +1.0
670,262 + B158DRAFT_2486 0.51 -0.7
670,291 + B158DRAFT_2486 0.55 -0.4
670,291 + B158DRAFT_2486 0.55 -0.6
670,297 + B158DRAFT_2486 0.56 -0.4
670,318 + B158DRAFT_2486 0.59 +1.8
670,326 - B158DRAFT_2486 0.60 -0.0
670,339 - B158DRAFT_2486 0.62 -0.0
670,341 + B158DRAFT_2486 0.63 -0.3
670,385 + B158DRAFT_2486 0.69 -0.9
670,393 - B158DRAFT_2486 0.71 -0.6
670,393 - B158DRAFT_2486 0.71 -0.1
670,434 + B158DRAFT_2486 0.77 +0.6
670,438 - B158DRAFT_2486 0.77 -1.4
670,482 + B158DRAFT_2486 0.84 -2.6
670,490 - B158DRAFT_2486 0.85 -0.4
670,579 + -1.5
670,662 + +0.1
670,665 - +0.2
670,665 - -0.4
670,673 - -0.9
670,678 - -1.1
670,686 + -0.5
670,839 - B158DRAFT_2487 0.26 +0.9
670,848 + B158DRAFT_2487 0.29 +0.2

Or see this region's nucleotide sequence