Experiment: m.b. Cholin acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2471 and B158DRAFT_2472 are separated by 18 nucleotides B158DRAFT_2472 and B158DRAFT_2473 are separated by 15 nucleotides B158DRAFT_2473 and B158DRAFT_2474 are separated by 325 nucleotides
B158DRAFT_2471: B158DRAFT_2471 - Restriction endonuclease, at 653,151 to 654,068
_2471
B158DRAFT_2472: B158DRAFT_2472 - Uncharacterized protein conserved in archaea, at 654,087 to 654,515
_2472
B158DRAFT_2473: B158DRAFT_2473 - alpha-L-glutamate ligases, RimK family, at 654,531 to 655,445
_2473
B158DRAFT_2474: B158DRAFT_2474 - alkaline phosphatase (EC 3.1.3.1), at 655,771 to 657,342
_2474
Position (kb) 654
655
656 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 653.577 kb on + strand, within B158DRAFT_2471 at 653.584 kb on + strand, within B158DRAFT_2471 at 653.585 kb on - strand, within B158DRAFT_2471 at 653.592 kb on - strand, within B158DRAFT_2471 at 653.597 kb on - strand, within B158DRAFT_2471 at 653.602 kb on + strand, within B158DRAFT_2471 at 653.602 kb on - strand, within B158DRAFT_2471 at 653.624 kb on + strand, within B158DRAFT_2471 at 653.624 kb on + strand, within B158DRAFT_2471 at 653.624 kb on + strand, within B158DRAFT_2471 at 653.624 kb on + strand, within B158DRAFT_2471 at 653.624 kb on + strand, within B158DRAFT_2471 at 653.624 kb on + strand, within B158DRAFT_2471 at 653.624 kb on + strand, within B158DRAFT_2471 at 653.624 kb on + strand, within B158DRAFT_2471 at 653.632 kb on - strand, within B158DRAFT_2471 at 653.632 kb on - strand, within B158DRAFT_2471 at 653.632 kb on - strand, within B158DRAFT_2471 at 653.632 kb on - strand, within B158DRAFT_2471 at 653.660 kb on + strand, within B158DRAFT_2471 at 653.668 kb on - strand, within B158DRAFT_2471 at 653.675 kb on + strand, within B158DRAFT_2471 at 653.717 kb on - strand, within B158DRAFT_2471 at 653.788 kb on + strand, within B158DRAFT_2471 at 653.796 kb on - strand, within B158DRAFT_2471 at 653.796 kb on - strand, within B158DRAFT_2471 at 653.846 kb on - strand, within B158DRAFT_2471 at 653.846 kb on - strand, within B158DRAFT_2471 at 653.853 kb on + strand, within B158DRAFT_2471 at 653.886 kb on - strand, within B158DRAFT_2471 at 653.886 kb on - strand, within B158DRAFT_2471 at 653.886 kb on - strand, within B158DRAFT_2471 at 653.915 kb on + strand, within B158DRAFT_2471 at 653.923 kb on - strand, within B158DRAFT_2471 at 653.923 kb on - strand, within B158DRAFT_2471 at 653.923 kb on - strand, within B158DRAFT_2471 at 654.055 kb on - strand at 654.069 kb on + strand at 654.078 kb on - strand at 654.085 kb on + strand at 654.102 kb on + strand at 654.110 kb on - strand at 654.254 kb on - strand, within B158DRAFT_2472 at 654.315 kb on + strand, within B158DRAFT_2472 at 654.315 kb on + strand, within B158DRAFT_2472 at 654.323 kb on - strand, within B158DRAFT_2472 at 654.323 kb on - strand, within B158DRAFT_2472 at 654.323 kb on - strand, within B158DRAFT_2472 at 654.327 kb on + strand, within B158DRAFT_2472 at 654.351 kb on + strand, within B158DRAFT_2472 at 654.354 kb on - strand, within B158DRAFT_2472 at 654.359 kb on - strand, within B158DRAFT_2472 at 654.372 kb on - strand, within B158DRAFT_2472 at 654.413 kb on - strand, within B158DRAFT_2472 at 654.421 kb on - strand, within B158DRAFT_2472 at 654.421 kb on - strand, within B158DRAFT_2472 at 654.446 kb on + strand, within B158DRAFT_2472 at 654.578 kb on - strand at 654.606 kb on + strand at 654.606 kb on + strand at 654.606 kb on + strand at 654.608 kb on - strand at 654.614 kb on - strand at 654.632 kb on + strand, within B158DRAFT_2473 at 654.640 kb on - strand, within B158DRAFT_2473 at 654.649 kb on + strand, within B158DRAFT_2473 at 654.687 kb on + strand, within B158DRAFT_2473 at 654.687 kb on + strand, within B158DRAFT_2473 at 654.687 kb on + strand, within B158DRAFT_2473 at 654.687 kb on + strand, within B158DRAFT_2473 at 654.695 kb on - strand, within B158DRAFT_2473 at 654.695 kb on - strand, within B158DRAFT_2473 at 654.707 kb on + strand, within B158DRAFT_2473 at 654.707 kb on + strand, within B158DRAFT_2473 at 654.707 kb on + strand, within B158DRAFT_2473 at 654.707 kb on + strand, within B158DRAFT_2473 at 654.707 kb on + strand, within B158DRAFT_2473 at 654.707 kb on + strand, within B158DRAFT_2473 at 654.707 kb on + strand, within B158DRAFT_2473 at 654.715 kb on - strand, within B158DRAFT_2473 at 654.715 kb on - strand, within B158DRAFT_2473 at 654.715 kb on - strand, within B158DRAFT_2473 at 654.715 kb on - strand, within B158DRAFT_2473 at 654.715 kb on - strand, within B158DRAFT_2473 at 654.745 kb on - strand, within B158DRAFT_2473 at 654.752 kb on + strand, within B158DRAFT_2473 at 654.752 kb on + strand, within B158DRAFT_2473 at 654.765 kb on - strand, within B158DRAFT_2473 at 654.773 kb on + strand, within B158DRAFT_2473 at 654.797 kb on + strand, within B158DRAFT_2473 at 654.797 kb on + strand, within B158DRAFT_2473 at 654.800 kb on - strand, within B158DRAFT_2473 at 654.805 kb on - strand, within B158DRAFT_2473 at 654.805 kb on - strand, within B158DRAFT_2473 at 654.807 kb on + strand, within B158DRAFT_2473 at 654.810 kb on - strand, within B158DRAFT_2473 at 654.856 kb on - strand, within B158DRAFT_2473 at 654.860 kb on + strand, within B158DRAFT_2473 at 654.868 kb on - strand, within B158DRAFT_2473 at 654.868 kb on - strand, within B158DRAFT_2473 at 654.945 kb on + strand, within B158DRAFT_2473 at 654.969 kb on - strand, within B158DRAFT_2473 at 654.969 kb on - strand, within B158DRAFT_2473 at 654.980 kb on + strand, within B158DRAFT_2473 at 654.988 kb on - strand, within B158DRAFT_2473 at 654.996 kb on - strand, within B158DRAFT_2473 at 655.021 kb on - strand, within B158DRAFT_2473 at 655.050 kb on - strand, within B158DRAFT_2473 at 655.050 kb on - strand, within B158DRAFT_2473 at 655.064 kb on + strand, within B158DRAFT_2473 at 655.072 kb on - strand, within B158DRAFT_2473 at 655.098 kb on + strand, within B158DRAFT_2473 at 655.098 kb on + strand, within B158DRAFT_2473 at 655.098 kb on + strand, within B158DRAFT_2473 at 655.098 kb on + strand, within B158DRAFT_2473 at 655.105 kb on + strand, within B158DRAFT_2473 at 655.105 kb on + strand, within B158DRAFT_2473 at 655.105 kb on - strand, within B158DRAFT_2473 at 655.106 kb on - strand, within B158DRAFT_2473 at 655.106 kb on - strand, within B158DRAFT_2473 at 655.106 kb on - strand, within B158DRAFT_2473 at 655.129 kb on + strand, within B158DRAFT_2473 at 655.137 kb on - strand, within B158DRAFT_2473 at 655.151 kb on + strand, within B158DRAFT_2473 at 655.185 kb on - strand, within B158DRAFT_2473 at 655.192 kb on + strand, within B158DRAFT_2473 at 655.192 kb on + strand, within B158DRAFT_2473 at 655.201 kb on - strand, within B158DRAFT_2473 at 655.219 kb on - strand, within B158DRAFT_2473 at 655.219 kb on - strand, within B158DRAFT_2473 at 655.224 kb on - strand, within B158DRAFT_2473 at 655.226 kb on - strand, within B158DRAFT_2473 at 655.226 kb on - strand, within B158DRAFT_2473 at 655.245 kb on - strand, within B158DRAFT_2473 at 655.284 kb on + strand, within B158DRAFT_2473 at 655.284 kb on + strand, within B158DRAFT_2473 at 655.287 kb on - strand, within B158DRAFT_2473 at 655.287 kb on - strand, within B158DRAFT_2473 at 655.287 kb on - strand, within B158DRAFT_2473 at 655.287 kb on - strand, within B158DRAFT_2473 at 655.289 kb on + strand, within B158DRAFT_2473 at 655.292 kb on - strand, within B158DRAFT_2473 at 655.292 kb on - strand, within B158DRAFT_2473 at 655.292 kb on - strand, within B158DRAFT_2473 at 655.296 kb on + strand, within B158DRAFT_2473 at 655.296 kb on + strand, within B158DRAFT_2473 at 655.297 kb on - strand, within B158DRAFT_2473 at 655.304 kb on - strand, within B158DRAFT_2473 at 655.304 kb on - strand, within B158DRAFT_2473 at 655.304 kb on - strand, within B158DRAFT_2473 at 655.304 kb on - strand, within B158DRAFT_2473 at 655.304 kb on - strand, within B158DRAFT_2473 at 655.313 kb on + strand, within B158DRAFT_2473 at 655.326 kb on - strand, within B158DRAFT_2473 at 655.326 kb on - strand, within B158DRAFT_2473 at 655.326 kb on - strand, within B158DRAFT_2473 at 655.326 kb on - strand, within B158DRAFT_2473 at 655.326 kb on - strand, within B158DRAFT_2473 at 655.344 kb on - strand, within B158DRAFT_2473 at 655.344 kb on - strand, within B158DRAFT_2473 at 655.346 kb on + strand, within B158DRAFT_2473 at 655.376 kb on + strand at 655.384 kb on + strand at 655.384 kb on - strand at 655.388 kb on + strand at 655.388 kb on + strand at 655.392 kb on - strand at 655.446 kb on - strand at 655.456 kb on - strand at 655.520 kb on - strand at 655.533 kb on + strand at 655.533 kb on + strand at 655.533 kb on + strand at 655.541 kb on + strand at 655.541 kb on - strand at 655.541 kb on - strand at 655.541 kb on - strand at 655.541 kb on - strand at 655.549 kb on - strand at 655.551 kb on - strand at 655.551 kb on - strand at 655.796 kb on + strand at 655.804 kb on + strand at 655.804 kb on - strand at 655.812 kb on - strand at 655.829 kb on - strand at 655.829 kb on - strand at 655.829 kb on - strand at 655.846 kb on + strand at 655.854 kb on - strand at 656.005 kb on + strand, within B158DRAFT_2474 at 656.109 kb on + strand, within B158DRAFT_2474 at 656.109 kb on - strand, within B158DRAFT_2474 at 656.120 kb on + strand, within B158DRAFT_2474 at 656.153 kb on + strand, within B158DRAFT_2474 at 656.171 kb on - strand, within B158DRAFT_2474 at 656.213 kb on + strand, within B158DRAFT_2474 at 656.213 kb on + strand, within B158DRAFT_2474 at 656.213 kb on + strand, within B158DRAFT_2474 at 656.213 kb on + strand, within B158DRAFT_2474 at 656.221 kb on - strand, within B158DRAFT_2474 at 656.226 kb on - strand, within B158DRAFT_2474 at 656.231 kb on - strand, within B158DRAFT_2474 at 656.231 kb on - strand, within B158DRAFT_2474 at 656.262 kb on - strand, within B158DRAFT_2474 at 656.306 kb on + strand, within B158DRAFT_2474 at 656.437 kb on - strand, within B158DRAFT_2474
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM remove 653,577 + B158DRAFT_2471 0.46 -0.5 653,584 + B158DRAFT_2471 0.47 -0.5 653,585 - B158DRAFT_2471 0.47 -0.4 653,592 - B158DRAFT_2471 0.48 +0.2 653,597 - B158DRAFT_2471 0.49 +0.5 653,602 + B158DRAFT_2471 0.49 +0.7 653,602 - B158DRAFT_2471 0.49 +0.1 653,624 + B158DRAFT_2471 0.52 -0.1 653,624 + B158DRAFT_2471 0.52 +0.8 653,624 + B158DRAFT_2471 0.52 +0.9 653,624 + B158DRAFT_2471 0.52 -1.0 653,624 + B158DRAFT_2471 0.52 +0.4 653,624 + B158DRAFT_2471 0.52 -0.3 653,624 + B158DRAFT_2471 0.52 -1.8 653,624 + B158DRAFT_2471 0.52 +0.0 653,632 - B158DRAFT_2471 0.52 +0.6 653,632 - B158DRAFT_2471 0.52 -1.0 653,632 - B158DRAFT_2471 0.52 +0.9 653,632 - B158DRAFT_2471 0.52 +0.0 653,660 + B158DRAFT_2471 0.55 +1.1 653,668 - B158DRAFT_2471 0.56 -0.7 653,675 + B158DRAFT_2471 0.57 +0.9 653,717 - B158DRAFT_2471 0.62 +1.1 653,788 + B158DRAFT_2471 0.69 -0.2 653,796 - B158DRAFT_2471 0.70 -1.2 653,796 - B158DRAFT_2471 0.70 +0.1 653,846 - B158DRAFT_2471 0.76 +0.1 653,846 - B158DRAFT_2471 0.76 +1.1 653,853 + B158DRAFT_2471 0.76 -0.7 653,886 - B158DRAFT_2471 0.80 -0.0 653,886 - B158DRAFT_2471 0.80 -0.4 653,886 - B158DRAFT_2471 0.80 -2.2 653,915 + B158DRAFT_2471 0.83 -0.2 653,923 - B158DRAFT_2471 0.84 +0.7 653,923 - B158DRAFT_2471 0.84 -0.7 653,923 - B158DRAFT_2471 0.84 -1.7 654,055 - -1.4 654,069 + +0.4 654,078 - -0.6 654,085 + -1.8 654,102 + -2.1 654,110 - +1.1 654,254 - B158DRAFT_2472 0.39 +0.7 654,315 + B158DRAFT_2472 0.53 -0.9 654,315 + B158DRAFT_2472 0.53 +0.6 654,323 - B158DRAFT_2472 0.55 -1.1 654,323 - B158DRAFT_2472 0.55 +0.4 654,323 - B158DRAFT_2472 0.55 -0.5 654,327 + B158DRAFT_2472 0.56 -0.2 654,351 + B158DRAFT_2472 0.62 +0.6 654,354 - B158DRAFT_2472 0.62 +0.9 654,359 - B158DRAFT_2472 0.63 -0.1 654,372 - B158DRAFT_2472 0.66 -1.0 654,413 - B158DRAFT_2472 0.76 +0.5 654,421 - B158DRAFT_2472 0.78 +0.2 654,421 - B158DRAFT_2472 0.78 +0.9 654,446 + B158DRAFT_2472 0.84 -0.4 654,578 - +0.1 654,606 + +0.3 654,606 + +0.1 654,606 + +0.5 654,608 - -0.6 654,614 - +0.0 654,632 + B158DRAFT_2473 0.11 +1.1 654,640 - B158DRAFT_2473 0.12 +1.2 654,649 + B158DRAFT_2473 0.13 +2.1 654,687 + B158DRAFT_2473 0.17 +0.4 654,687 + B158DRAFT_2473 0.17 +0.1 654,687 + B158DRAFT_2473 0.17 -0.5 654,687 + B158DRAFT_2473 0.17 -0.5 654,695 - B158DRAFT_2473 0.18 -0.8 654,695 - B158DRAFT_2473 0.18 +0.2 654,707 + B158DRAFT_2473 0.19 +0.2 654,707 + B158DRAFT_2473 0.19 +1.6 654,707 + B158DRAFT_2473 0.19 -0.3 654,707 + B158DRAFT_2473 0.19 -0.6 654,707 + B158DRAFT_2473 0.19 +0.9 654,707 + B158DRAFT_2473 0.19 +0.5 654,707 + B158DRAFT_2473 0.19 -0.4 654,715 - B158DRAFT_2473 0.20 +1.8 654,715 - B158DRAFT_2473 0.20 +0.6 654,715 - B158DRAFT_2473 0.20 -1.1 654,715 - B158DRAFT_2473 0.20 -0.8 654,715 - B158DRAFT_2473 0.20 +0.6 654,745 - B158DRAFT_2473 0.23 +2.4 654,752 + B158DRAFT_2473 0.24 -0.2 654,752 + B158DRAFT_2473 0.24 +0.0 654,765 - B158DRAFT_2473 0.26 +0.7 654,773 + B158DRAFT_2473 0.26 +1.9 654,797 + B158DRAFT_2473 0.29 +0.2 654,797 + B158DRAFT_2473 0.29 -2.2 654,800 - B158DRAFT_2473 0.29 +0.1 654,805 - B158DRAFT_2473 0.30 +4.0 654,805 - B158DRAFT_2473 0.30 -1.4 654,807 + B158DRAFT_2473 0.30 -0.5 654,810 - B158DRAFT_2473 0.30 +0.6 654,856 - B158DRAFT_2473 0.36 +1.3 654,860 + B158DRAFT_2473 0.36 +0.3 654,868 - B158DRAFT_2473 0.37 -0.6 654,868 - B158DRAFT_2473 0.37 -0.6 654,945 + B158DRAFT_2473 0.45 -0.3 654,969 - B158DRAFT_2473 0.48 -0.3 654,969 - B158DRAFT_2473 0.48 +1.5 654,980 + B158DRAFT_2473 0.49 +0.2 654,988 - B158DRAFT_2473 0.50 +0.0 654,996 - B158DRAFT_2473 0.51 +1.0 655,021 - B158DRAFT_2473 0.54 -0.6 655,050 - B158DRAFT_2473 0.57 -0.2 655,050 - B158DRAFT_2473 0.57 -0.6 655,064 + B158DRAFT_2473 0.58 +0.6 655,072 - B158DRAFT_2473 0.59 -0.6 655,098 + B158DRAFT_2473 0.62 +0.2 655,098 + B158DRAFT_2473 0.62 -0.1 655,098 + B158DRAFT_2473 0.62 +1.7 655,098 + B158DRAFT_2473 0.62 -0.5 655,105 + B158DRAFT_2473 0.63 -0.4 655,105 + B158DRAFT_2473 0.63 -0.8 655,105 - B158DRAFT_2473 0.63 +1.0 655,106 - B158DRAFT_2473 0.63 +0.8 655,106 - B158DRAFT_2473 0.63 +0.3 655,106 - B158DRAFT_2473 0.63 -1.5 655,129 + B158DRAFT_2473 0.65 -1.1 655,137 - B158DRAFT_2473 0.66 +0.5 655,151 + B158DRAFT_2473 0.68 +0.9 655,185 - B158DRAFT_2473 0.71 -1.3 655,192 + B158DRAFT_2473 0.72 -0.0 655,192 + B158DRAFT_2473 0.72 +1.0 655,201 - B158DRAFT_2473 0.73 -0.2 655,219 - B158DRAFT_2473 0.75 -0.1 655,219 - B158DRAFT_2473 0.75 -0.1 655,224 - B158DRAFT_2473 0.76 -0.4 655,226 - B158DRAFT_2473 0.76 +0.3 655,226 - B158DRAFT_2473 0.76 +0.1 655,245 - B158DRAFT_2473 0.78 -0.4 655,284 + B158DRAFT_2473 0.82 +0.2 655,284 + B158DRAFT_2473 0.82 +0.2 655,287 - B158DRAFT_2473 0.83 +1.9 655,287 - B158DRAFT_2473 0.83 +0.2 655,287 - B158DRAFT_2473 0.83 -0.8 655,287 - B158DRAFT_2473 0.83 -0.5 655,289 + B158DRAFT_2473 0.83 +0.0 655,292 - B158DRAFT_2473 0.83 -0.5 655,292 - B158DRAFT_2473 0.83 -0.3 655,292 - B158DRAFT_2473 0.83 -0.6 655,296 + B158DRAFT_2473 0.84 +0.0 655,296 + B158DRAFT_2473 0.84 +1.1 655,297 - B158DRAFT_2473 0.84 -0.7 655,304 - B158DRAFT_2473 0.84 -0.6 655,304 - B158DRAFT_2473 0.84 +0.4 655,304 - B158DRAFT_2473 0.84 +0.0 655,304 - B158DRAFT_2473 0.84 +0.1 655,304 - B158DRAFT_2473 0.84 -1.4 655,313 + B158DRAFT_2473 0.85 +0.5 655,326 - B158DRAFT_2473 0.87 -0.8 655,326 - B158DRAFT_2473 0.87 -0.4 655,326 - B158DRAFT_2473 0.87 +0.0 655,326 - B158DRAFT_2473 0.87 +0.7 655,326 - B158DRAFT_2473 0.87 -0.1 655,344 - B158DRAFT_2473 0.89 -0.3 655,344 - B158DRAFT_2473 0.89 +0.3 655,346 + B158DRAFT_2473 0.89 -0.1 655,376 + -0.2 655,384 + -0.2 655,384 - +1.5 655,388 + -0.1 655,388 + +0.3 655,392 - -0.5 655,446 - -0.4 655,456 - +1.8 655,520 - +0.3 655,533 + +0.8 655,533 + +0.1 655,533 + -0.4 655,541 + +0.1 655,541 - -0.4 655,541 - +0.2 655,541 - -1.2 655,541 - +0.2 655,549 - -1.0 655,551 - -0.8 655,551 - -0.4 655,796 + +1.5 655,804 + -0.4 655,804 - -1.9 655,812 - -1.1 655,829 - -0.5 655,829 - -0.9 655,829 - +1.0 655,846 + +0.3 655,854 - -0.1 656,005 + B158DRAFT_2474 0.15 -1.3 656,109 + B158DRAFT_2474 0.22 -1.1 656,109 - B158DRAFT_2474 0.22 +0.0 656,120 + B158DRAFT_2474 0.22 -0.1 656,153 + B158DRAFT_2474 0.24 -1.0 656,171 - B158DRAFT_2474 0.25 -0.5 656,213 + B158DRAFT_2474 0.28 +0.2 656,213 + B158DRAFT_2474 0.28 -0.7 656,213 + B158DRAFT_2474 0.28 +0.9 656,213 + B158DRAFT_2474 0.28 +0.7 656,221 - B158DRAFT_2474 0.29 -0.4 656,226 - B158DRAFT_2474 0.29 -1.4 656,231 - B158DRAFT_2474 0.29 +1.5 656,231 - B158DRAFT_2474 0.29 -0.8 656,262 - B158DRAFT_2474 0.31 -0.6 656,306 + B158DRAFT_2474 0.34 -1.3 656,437 - B158DRAFT_2474 0.42 -0.1
Or see this region's nucleotide sequence