Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2450

Experiment: m.b. Cholin acetate 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2449 and B158DRAFT_2450 are separated by 185 nucleotidesB158DRAFT_2450 and B158DRAFT_2451 are separated by 4 nucleotides B158DRAFT_2449: B158DRAFT_2449 - TonB family C-terminal domain, at 622,146 to 623,378 _2449 B158DRAFT_2450: B158DRAFT_2450 - Predicted carboxypeptidase, at 623,564 to 624,691 _2450 B158DRAFT_2451: B158DRAFT_2451 - saccharopine dehydrogenase (NADP+, L-glutamate forming) (EC 1.5.1.10), at 624,696 to 626,021 _2451 Position (kb) 623 624 625Strain fitness (log2 ratio) -2 -1 0 1 2 3 4 5 6at 622.568 kb on - strand, within B158DRAFT_2449at 622.568 kb on - strand, within B158DRAFT_2449at 622.568 kb on - strand, within B158DRAFT_2449at 622.568 kb on - strand, within B158DRAFT_2449at 622.573 kb on - strand, within B158DRAFT_2449at 622.588 kb on + strand, within B158DRAFT_2449at 622.596 kb on - strand, within B158DRAFT_2449at 622.691 kb on - strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.701 kb on + strand, within B158DRAFT_2449at 622.709 kb on - strand, within B158DRAFT_2449at 622.730 kb on + strand, within B158DRAFT_2449at 622.730 kb on + strand, within B158DRAFT_2449at 622.738 kb on - strand, within B158DRAFT_2449at 622.738 kb on - strand, within B158DRAFT_2449at 622.739 kb on + strand, within B158DRAFT_2449at 622.808 kb on + strand, within B158DRAFT_2449at 622.830 kb on - strand, within B158DRAFT_2449at 622.845 kb on + strand, within B158DRAFT_2449at 622.863 kb on + strand, within B158DRAFT_2449at 622.863 kb on + strand, within B158DRAFT_2449at 622.863 kb on + strand, within B158DRAFT_2449at 622.863 kb on + strand, within B158DRAFT_2449at 622.863 kb on - strand, within B158DRAFT_2449at 622.890 kb on - strand, within B158DRAFT_2449at 622.914 kb on - strand, within B158DRAFT_2449at 622.933 kb on + strand, within B158DRAFT_2449at 622.950 kb on - strand, within B158DRAFT_2449at 622.981 kb on - strand, within B158DRAFT_2449at 623.055 kb on + strand, within B158DRAFT_2449at 623.063 kb on - strand, within B158DRAFT_2449at 623.063 kb on - strand, within B158DRAFT_2449at 623.109 kb on - strand, within B158DRAFT_2449at 623.129 kb on + strand, within B158DRAFT_2449at 623.178 kb on - strand, within B158DRAFT_2449at 623.182 kb on + strand, within B158DRAFT_2449at 623.189 kb on + strand, within B158DRAFT_2449at 623.189 kb on + strand, within B158DRAFT_2449at 623.197 kb on - strand, within B158DRAFT_2449at 623.216 kb on + strand, within B158DRAFT_2449at 623.221 kb on + strand, within B158DRAFT_2449at 623.229 kb on + strand, within B158DRAFT_2449at 623.229 kb on - strand, within B158DRAFT_2449at 623.247 kb on - strand, within B158DRAFT_2449at 623.265 kb on + strandat 623.265 kb on + strandat 623.294 kb on + strandat 623.294 kb on + strandat 623.294 kb on + strandat 623.302 kb on - strandat 623.382 kb on + strandat 623.390 kb on + strandat 623.390 kb on - strandat 623.390 kb on - strandat 623.406 kb on - strandat 623.475 kb on + strandat 623.475 kb on + strandat 623.483 kb on - strandat 623.487 kb on + strandat 623.661 kb on - strandat 623.842 kb on - strand, within B158DRAFT_2450at 623.867 kb on - strand, within B158DRAFT_2450at 623.915 kb on + strand, within B158DRAFT_2450at 623.943 kb on + strand, within B158DRAFT_2450at 623.951 kb on - strand, within B158DRAFT_2450at 623.951 kb on - strand, within B158DRAFT_2450at 623.951 kb on - strand, within B158DRAFT_2450at 624.015 kb on - strand, within B158DRAFT_2450at 624.053 kb on + strand, within B158DRAFT_2450at 624.065 kb on + strand, within B158DRAFT_2450at 624.065 kb on + strand, within B158DRAFT_2450at 624.077 kb on + strand, within B158DRAFT_2450at 624.077 kb on + strand, within B158DRAFT_2450at 624.077 kb on + strand, within B158DRAFT_2450at 624.085 kb on - strand, within B158DRAFT_2450at 624.085 kb on - strand, within B158DRAFT_2450at 624.087 kb on + strand, within B158DRAFT_2450at 624.087 kb on + strand, within B158DRAFT_2450at 624.120 kb on - strand, within B158DRAFT_2450at 624.307 kb on + strand, within B158DRAFT_2450at 624.350 kb on + strand, within B158DRAFT_2450at 624.358 kb on - strand, within B158DRAFT_2450at 624.360 kb on + strand, within B158DRAFT_2450at 624.413 kb on - strand, within B158DRAFT_2450at 624.470 kb on + strand, within B158DRAFT_2450at 624.470 kb on + strand, within B158DRAFT_2450at 624.470 kb on + strand, within B158DRAFT_2450at 624.470 kb on + strand, within B158DRAFT_2450at 624.470 kb on + strand, within B158DRAFT_2450at 624.470 kb on + strand, within B158DRAFT_2450at 624.470 kb on + strand, within B158DRAFT_2450at 624.470 kb on + strand, within B158DRAFT_2450at 624.478 kb on - strand, within B158DRAFT_2450at 624.478 kb on - strand, within B158DRAFT_2450at 624.478 kb on - strand, within B158DRAFT_2450at 624.478 kb on - strand, within B158DRAFT_2450at 624.478 kb on - strand, within B158DRAFT_2450at 624.478 kb on - strand, within B158DRAFT_2450at 624.478 kb on - strand, within B158DRAFT_2450at 624.533 kb on + strand, within B158DRAFT_2450at 624.539 kb on + strand, within B158DRAFT_2450at 624.541 kb on + strand, within B158DRAFT_2450at 624.541 kb on - strand, within B158DRAFT_2450at 624.549 kb on - strand, within B158DRAFT_2450at 624.549 kb on - strand, within B158DRAFT_2450at 624.549 kb on - strand, within B158DRAFT_2450at 624.615 kb on + strandat 624.623 kb on - strandat 624.775 kb on + strandat 624.798 kb on - strandat 624.858 kb on - strand, within B158DRAFT_2451at 624.904 kb on - strand, within B158DRAFT_2451at 624.927 kb on + strand, within B158DRAFT_2451at 625.020 kb on - strand, within B158DRAFT_2451at 625.041 kb on - strand, within B158DRAFT_2451at 625.062 kb on + strand, within B158DRAFT_2451at 625.070 kb on - strand, within B158DRAFT_2451at 625.070 kb on - strand, within B158DRAFT_2451at 625.259 kb on - strand, within B158DRAFT_2451at 625.299 kb on + strand, within B158DRAFT_2451at 625.299 kb on + strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.307 kb on - strand, within B158DRAFT_2451at 625.309 kb on + strand, within B158DRAFT_2451at 625.332 kb on + strand, within B158DRAFT_2451at 625.364 kb on + strand, within B158DRAFT_2451at 625.372 kb on - strand, within B158DRAFT_2451at 625.372 kb on - strand, within B158DRAFT_2451at 625.372 kb on - strand, within B158DRAFT_2451at 625.432 kb on + strand, within B158DRAFT_2451at 625.432 kb on + strand, within B158DRAFT_2451at 625.537 kb on + strand, within B158DRAFT_2451at 625.537 kb on + strand, within B158DRAFT_2451at 625.537 kb on + strand, within B158DRAFT_2451at 625.547 kb on + strand, within B158DRAFT_2451at 625.547 kb on + strand, within B158DRAFT_2451at 625.555 kb on - strand, within B158DRAFT_2451at 625.555 kb on - strand, within B158DRAFT_2451at 625.600 kb on + strand, within B158DRAFT_2451at 625.607 kb on - strand, within B158DRAFT_2451at 625.608 kb on - strand, within B158DRAFT_2451at 625.618 kb on - strand, within B158DRAFT_2451

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM
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622,568 - B158DRAFT_2449 0.34 -0.6
622,568 - B158DRAFT_2449 0.34 -0.6
622,568 - B158DRAFT_2449 0.34 -1.2
622,568 - B158DRAFT_2449 0.34 +0.2
622,573 - B158DRAFT_2449 0.35 -1.7
622,588 + B158DRAFT_2449 0.36 +0.3
622,596 - B158DRAFT_2449 0.36 +1.7
622,691 - B158DRAFT_2449 0.44 -0.7
622,701 + B158DRAFT_2449 0.45 -0.9
622,701 + B158DRAFT_2449 0.45 -2.1
622,701 + B158DRAFT_2449 0.45 -0.3
622,701 + B158DRAFT_2449 0.45 -1.4
622,701 + B158DRAFT_2449 0.45 -0.7
622,709 - B158DRAFT_2449 0.46 -0.5
622,730 + B158DRAFT_2449 0.47 -0.5
622,730 + B158DRAFT_2449 0.47 -0.3
622,738 - B158DRAFT_2449 0.48 -0.7
622,738 - B158DRAFT_2449 0.48 +0.8
622,739 + B158DRAFT_2449 0.48 -1.2
622,808 + B158DRAFT_2449 0.54 -0.5
622,830 - B158DRAFT_2449 0.55 -0.5
622,845 + B158DRAFT_2449 0.57 -1.5
622,863 + B158DRAFT_2449 0.58 +0.1
622,863 + B158DRAFT_2449 0.58 -0.7
622,863 + B158DRAFT_2449 0.58 -1.3
622,863 + B158DRAFT_2449 0.58 -1.6
622,863 - B158DRAFT_2449 0.58 +0.8
622,890 - B158DRAFT_2449 0.60 -1.1
622,914 - B158DRAFT_2449 0.62 +0.3
622,933 + B158DRAFT_2449 0.64 +0.3
622,950 - B158DRAFT_2449 0.65 +0.1
622,981 - B158DRAFT_2449 0.68 +0.7
623,055 + B158DRAFT_2449 0.74 -1.2
623,063 - B158DRAFT_2449 0.74 -0.7
623,063 - B158DRAFT_2449 0.74 +1.4
623,109 - B158DRAFT_2449 0.78 +0.1
623,129 + B158DRAFT_2449 0.80 -0.5
623,178 - B158DRAFT_2449 0.84 +1.3
623,182 + B158DRAFT_2449 0.84 +0.3
623,189 + B158DRAFT_2449 0.85 +2.5
623,189 + B158DRAFT_2449 0.85 -1.1
623,197 - B158DRAFT_2449 0.85 +0.9
623,216 + B158DRAFT_2449 0.87 -0.2
623,221 + B158DRAFT_2449 0.87 -0.2
623,229 + B158DRAFT_2449 0.88 +0.6
623,229 - B158DRAFT_2449 0.88 -2.4
623,247 - B158DRAFT_2449 0.89 -0.8
623,265 + +0.0
623,265 + -1.4
623,294 + -0.7
623,294 + -0.1
623,294 + +0.5
623,302 - +0.2
623,382 + -1.4
623,390 + +0.2
623,390 - +2.4
623,390 - +2.8
623,406 - +2.8
623,475 + -1.3
623,475 + -0.5
623,483 - +4.1
623,487 + +1.4
623,661 - +4.2
623,842 - B158DRAFT_2450 0.25 +4.0
623,867 - B158DRAFT_2450 0.27 +3.5
623,915 + B158DRAFT_2450 0.31 -0.3
623,943 + B158DRAFT_2450 0.34 +1.6
623,951 - B158DRAFT_2450 0.34 +3.3
623,951 - B158DRAFT_2450 0.34 +4.2
623,951 - B158DRAFT_2450 0.34 +4.1
624,015 - B158DRAFT_2450 0.40 +3.3
624,053 + B158DRAFT_2450 0.43 -0.3
624,065 + B158DRAFT_2450 0.44 -0.8
624,065 + B158DRAFT_2450 0.44 +0.6
624,077 + B158DRAFT_2450 0.45 -0.4
624,077 + B158DRAFT_2450 0.45 +0.1
624,077 + B158DRAFT_2450 0.45 +1.0
624,085 - B158DRAFT_2450 0.46 +4.3
624,085 - B158DRAFT_2450 0.46 +4.2
624,087 + B158DRAFT_2450 0.46 +3.6
624,087 + B158DRAFT_2450 0.46 +1.6
624,120 - B158DRAFT_2450 0.49 +3.9
624,307 + B158DRAFT_2450 0.66 -0.3
624,350 + B158DRAFT_2450 0.70 -0.6
624,358 - B158DRAFT_2450 0.70 +4.1
624,360 + B158DRAFT_2450 0.71 -0.3
624,413 - B158DRAFT_2450 0.75 +4.6
624,470 + B158DRAFT_2450 0.80 -0.6
624,470 + B158DRAFT_2450 0.80 -2.3
624,470 + B158DRAFT_2450 0.80 -0.7
624,470 + B158DRAFT_2450 0.80 +0.1
624,470 + B158DRAFT_2450 0.80 +1.3
624,470 + B158DRAFT_2450 0.80 +0.9
624,470 + B158DRAFT_2450 0.80 -1.5
624,470 + B158DRAFT_2450 0.80 +0.5
624,478 - B158DRAFT_2450 0.81 +4.6
624,478 - B158DRAFT_2450 0.81 +4.4
624,478 - B158DRAFT_2450 0.81 +4.0
624,478 - B158DRAFT_2450 0.81 +4.1
624,478 - B158DRAFT_2450 0.81 +3.6
624,478 - B158DRAFT_2450 0.81 +4.2
624,478 - B158DRAFT_2450 0.81 +4.0
624,533 + B158DRAFT_2450 0.86 +0.7
624,539 + B158DRAFT_2450 0.86 +0.0
624,541 + B158DRAFT_2450 0.87 +0.6
624,541 - B158DRAFT_2450 0.87 +4.7
624,549 - B158DRAFT_2450 0.87 +3.8
624,549 - B158DRAFT_2450 0.87 +4.1
624,549 - B158DRAFT_2450 0.87 +4.2
624,615 + +0.5
624,623 - +4.7
624,775 + +5.6
624,798 - +3.5
624,858 - B158DRAFT_2451 0.12 +5.9
624,904 - B158DRAFT_2451 0.16 +5.6
624,927 + B158DRAFT_2451 0.17 +5.4
625,020 - B158DRAFT_2451 0.24 +5.3
625,041 - B158DRAFT_2451 0.26 +4.6
625,062 + B158DRAFT_2451 0.28 +5.2
625,070 - B158DRAFT_2451 0.28 +4.9
625,070 - B158DRAFT_2451 0.28 +5.4
625,259 - B158DRAFT_2451 0.42 +5.4
625,299 + B158DRAFT_2451 0.45 +5.6
625,299 + B158DRAFT_2451 0.45 +5.4
625,307 - B158DRAFT_2451 0.46 +5.8
625,307 - B158DRAFT_2451 0.46 +5.2
625,307 - B158DRAFT_2451 0.46 +5.2
625,307 - B158DRAFT_2451 0.46 +5.5
625,307 - B158DRAFT_2451 0.46 +5.7
625,307 - B158DRAFT_2451 0.46 +4.5
625,309 + B158DRAFT_2451 0.46 +5.8
625,332 + B158DRAFT_2451 0.48 +4.4
625,364 + B158DRAFT_2451 0.50 +5.7
625,372 - B158DRAFT_2451 0.51 +6.1
625,372 - B158DRAFT_2451 0.51 +5.4
625,372 - B158DRAFT_2451 0.51 +5.8
625,432 + B158DRAFT_2451 0.56 +5.4
625,432 + B158DRAFT_2451 0.56 +5.3
625,537 + B158DRAFT_2451 0.63 +5.7
625,537 + B158DRAFT_2451 0.63 +4.9
625,537 + B158DRAFT_2451 0.63 +4.5
625,547 + B158DRAFT_2451 0.64 +5.4
625,547 + B158DRAFT_2451 0.64 +5.8
625,555 - B158DRAFT_2451 0.65 +5.7
625,555 - B158DRAFT_2451 0.65 +5.4
625,600 + B158DRAFT_2451 0.68 +5.4
625,607 - B158DRAFT_2451 0.69 +5.7
625,608 - B158DRAFT_2451 0.69 +5.3
625,618 - B158DRAFT_2451 0.70 +5.1

Or see this region's nucleotide sequence