Experiment: m.b. Cholin acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2288 and B158DRAFT_2289 overlap by 4 nucleotides B158DRAFT_2289 and B158DRAFT_2290 overlap by 4 nucleotides B158DRAFT_2290 and B158DRAFT_2291 overlap by 13 nucleotides
B158DRAFT_2288: B158DRAFT_2288 - haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E, at 452,843 to 454,540
_2288
B158DRAFT_2289: B158DRAFT_2289 - imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 454,537 to 455,133
_2289
B158DRAFT_2290: B158DRAFT_2290 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit, at 455,130 to 455,738
_2290
B158DRAFT_2291: B158DRAFT_2291 - imidazoleglycerol phosphate synthase, cyclase subunit, at 455,726 to 456,529
_2291
Position (kb) 454
455
456 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 453.572 kb on - strand, within B158DRAFT_2288 at 453.779 kb on - strand, within B158DRAFT_2288 at 453.790 kb on + strand, within B158DRAFT_2288 at 453.790 kb on + strand, within B158DRAFT_2288 at 453.798 kb on - strand, within B158DRAFT_2288 at 453.803 kb on - strand, within B158DRAFT_2288 at 453.849 kb on - strand, within B158DRAFT_2288 at 453.861 kb on + strand, within B158DRAFT_2288 at 453.878 kb on + strand, within B158DRAFT_2288 at 453.888 kb on + strand, within B158DRAFT_2288 at 453.946 kb on + strand, within B158DRAFT_2288 at 454.041 kb on + strand, within B158DRAFT_2288 at 454.041 kb on + strand, within B158DRAFT_2288 at 454.084 kb on - strand, within B158DRAFT_2288 at 454.105 kb on + strand, within B158DRAFT_2288 at 454.113 kb on - strand, within B158DRAFT_2288 at 454.113 kb on - strand, within B158DRAFT_2288 at 454.142 kb on + strand, within B158DRAFT_2288 at 454.142 kb on + strand, within B158DRAFT_2288 at 454.142 kb on + strand, within B158DRAFT_2288 at 454.142 kb on + strand, within B158DRAFT_2288 at 454.142 kb on + strand, within B158DRAFT_2288 at 454.142 kb on + strand, within B158DRAFT_2288 at 454.142 kb on + strand, within B158DRAFT_2288 at 454.150 kb on - strand, within B158DRAFT_2288 at 454.150 kb on - strand, within B158DRAFT_2288 at 454.150 kb on - strand, within B158DRAFT_2288 at 454.150 kb on - strand, within B158DRAFT_2288 at 454.173 kb on + strand, within B158DRAFT_2288 at 454.173 kb on + strand, within B158DRAFT_2288 at 454.173 kb on + strand, within B158DRAFT_2288 at 454.173 kb on + strand, within B158DRAFT_2288 at 454.173 kb on + strand, within B158DRAFT_2288 at 454.173 kb on + strand, within B158DRAFT_2288 at 454.173 kb on + strand, within B158DRAFT_2288 at 454.181 kb on - strand, within B158DRAFT_2288 at 454.181 kb on - strand, within B158DRAFT_2288 at 454.181 kb on - strand, within B158DRAFT_2288 at 454.181 kb on - strand, within B158DRAFT_2288 at 454.181 kb on - strand, within B158DRAFT_2288 at 454.181 kb on - strand, within B158DRAFT_2288 at 454.324 kb on + strand, within B158DRAFT_2288 at 454.324 kb on + strand, within B158DRAFT_2288 at 454.324 kb on + strand, within B158DRAFT_2288 at 454.324 kb on + strand, within B158DRAFT_2288 at 454.324 kb on + strand, within B158DRAFT_2288 at 454.332 kb on - strand, within B158DRAFT_2288 at 454.332 kb on - strand, within B158DRAFT_2288 at 454.332 kb on - strand, within B158DRAFT_2288 at 454.352 kb on - strand, within B158DRAFT_2288 at 454.352 kb on - strand, within B158DRAFT_2288 at 454.361 kb on + strand, within B158DRAFT_2288 at 454.419 kb on - strand at 454.463 kb on - strand at 454.612 kb on - strand, within B158DRAFT_2289 at 454.641 kb on + strand, within B158DRAFT_2289 at 454.646 kb on + strand, within B158DRAFT_2289 at 454.667 kb on + strand, within B158DRAFT_2289 at 454.797 kb on + strand, within B158DRAFT_2289 at 454.797 kb on + strand, within B158DRAFT_2289 at 454.805 kb on - strand, within B158DRAFT_2289 at 454.858 kb on + strand, within B158DRAFT_2289 at 454.863 kb on + strand, within B158DRAFT_2289 at 454.866 kb on - strand, within B158DRAFT_2289 at 454.874 kb on + strand, within B158DRAFT_2289 at 454.876 kb on + strand, within B158DRAFT_2289 at 454.968 kb on + strand, within B158DRAFT_2289 at 454.969 kb on + strand, within B158DRAFT_2289 at 455.007 kb on + strand, within B158DRAFT_2289 at 455.007 kb on + strand, within B158DRAFT_2289 at 455.007 kb on + strand, within B158DRAFT_2289 at 455.007 kb on + strand, within B158DRAFT_2289 at 455.015 kb on - strand, within B158DRAFT_2289 at 455.015 kb on - strand, within B158DRAFT_2289 at 455.015 kb on - strand, within B158DRAFT_2289 at 455.015 kb on - strand, within B158DRAFT_2289 at 455.044 kb on + strand, within B158DRAFT_2289 at 455.069 kb on + strand, within B158DRAFT_2289 at 455.077 kb on - strand at 455.093 kb on + strand at 455.122 kb on - strand at 455.129 kb on - strand at 455.137 kb on + strand at 455.137 kb on + strand at 455.224 kb on + strand, within B158DRAFT_2290 at 455.230 kb on + strand, within B158DRAFT_2290 at 455.246 kb on - strand, within B158DRAFT_2290 at 455.276 kb on + strand, within B158DRAFT_2290 at 455.279 kb on - strand, within B158DRAFT_2290 at 455.349 kb on - strand, within B158DRAFT_2290 at 455.391 kb on + strand, within B158DRAFT_2290 at 455.398 kb on + strand, within B158DRAFT_2290 at 455.409 kb on + strand, within B158DRAFT_2290 at 455.412 kb on - strand, within B158DRAFT_2290 at 455.412 kb on - strand, within B158DRAFT_2290 at 455.420 kb on - strand, within B158DRAFT_2290 at 455.591 kb on + strand, within B158DRAFT_2290 at 455.606 kb on + strand, within B158DRAFT_2290 at 455.614 kb on - strand, within B158DRAFT_2290 at 455.727 kb on + strand at 455.792 kb on + strand at 455.795 kb on - strand at 455.799 kb on + strand at 455.828 kb on + strand, within B158DRAFT_2291 at 455.836 kb on + strand, within B158DRAFT_2291 at 455.836 kb on + strand, within B158DRAFT_2291 at 455.836 kb on - strand, within B158DRAFT_2291 at 455.836 kb on - strand, within B158DRAFT_2291 at 455.844 kb on - strand, within B158DRAFT_2291 at 455.844 kb on - strand, within B158DRAFT_2291 at 455.844 kb on - strand, within B158DRAFT_2291 at 455.845 kb on - strand, within B158DRAFT_2291 at 455.927 kb on - strand, within B158DRAFT_2291 at 455.949 kb on + strand, within B158DRAFT_2291 at 455.957 kb on - strand, within B158DRAFT_2291 at 456.064 kb on - strand, within B158DRAFT_2291 at 456.126 kb on + strand, within B158DRAFT_2291
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM remove 453,572 - B158DRAFT_2288 0.43 -0.8 453,779 - B158DRAFT_2288 0.55 +0.0 453,790 + B158DRAFT_2288 0.56 +0.2 453,790 + B158DRAFT_2288 0.56 -0.9 453,798 - B158DRAFT_2288 0.56 -1.7 453,803 - B158DRAFT_2288 0.57 -0.9 453,849 - B158DRAFT_2288 0.59 -0.1 453,861 + B158DRAFT_2288 0.60 +0.5 453,878 + B158DRAFT_2288 0.61 -0.4 453,888 + B158DRAFT_2288 0.62 +1.6 453,946 + B158DRAFT_2288 0.65 -0.9 454,041 + B158DRAFT_2288 0.71 -0.3 454,041 + B158DRAFT_2288 0.71 -0.9 454,084 - B158DRAFT_2288 0.73 +1.1 454,105 + B158DRAFT_2288 0.74 +0.1 454,113 - B158DRAFT_2288 0.75 +0.2 454,113 - B158DRAFT_2288 0.75 +2.0 454,142 + B158DRAFT_2288 0.77 -1.5 454,142 + B158DRAFT_2288 0.77 +0.9 454,142 + B158DRAFT_2288 0.77 +2.7 454,142 + B158DRAFT_2288 0.77 +1.2 454,142 + B158DRAFT_2288 0.77 +0.1 454,142 + B158DRAFT_2288 0.77 -0.9 454,142 + B158DRAFT_2288 0.77 +1.0 454,150 - B158DRAFT_2288 0.77 +0.5 454,150 - B158DRAFT_2288 0.77 -2.4 454,150 - B158DRAFT_2288 0.77 +0.3 454,150 - B158DRAFT_2288 0.77 -0.1 454,173 + B158DRAFT_2288 0.78 -0.1 454,173 + B158DRAFT_2288 0.78 -1.7 454,173 + B158DRAFT_2288 0.78 -0.0 454,173 + B158DRAFT_2288 0.78 +0.3 454,173 + B158DRAFT_2288 0.78 +0.4 454,173 + B158DRAFT_2288 0.78 -2.2 454,173 + B158DRAFT_2288 0.78 -2.5 454,181 - B158DRAFT_2288 0.79 +0.4 454,181 - B158DRAFT_2288 0.79 -0.6 454,181 - B158DRAFT_2288 0.79 -0.2 454,181 - B158DRAFT_2288 0.79 -0.6 454,181 - B158DRAFT_2288 0.79 -0.9 454,181 - B158DRAFT_2288 0.79 -0.7 454,324 + B158DRAFT_2288 0.87 +0.7 454,324 + B158DRAFT_2288 0.87 -0.5 454,324 + B158DRAFT_2288 0.87 +1.9 454,324 + B158DRAFT_2288 0.87 +2.2 454,324 + B158DRAFT_2288 0.87 -0.5 454,332 - B158DRAFT_2288 0.88 +0.2 454,332 - B158DRAFT_2288 0.88 -0.6 454,332 - B158DRAFT_2288 0.88 -1.2 454,352 - B158DRAFT_2288 0.89 -1.2 454,352 - B158DRAFT_2288 0.89 +1.3 454,361 + B158DRAFT_2288 0.89 -0.2 454,419 - +1.0 454,463 - -0.9 454,612 - B158DRAFT_2289 0.13 -1.8 454,641 + B158DRAFT_2289 0.17 -0.3 454,646 + B158DRAFT_2289 0.18 -0.1 454,667 + B158DRAFT_2289 0.22 -0.1 454,797 + B158DRAFT_2289 0.44 +2.7 454,797 + B158DRAFT_2289 0.44 +1.1 454,805 - B158DRAFT_2289 0.45 -0.2 454,858 + B158DRAFT_2289 0.54 -0.7 454,863 + B158DRAFT_2289 0.55 -1.3 454,866 - B158DRAFT_2289 0.55 -1.2 454,874 + B158DRAFT_2289 0.56 +0.0 454,876 + B158DRAFT_2289 0.57 -0.5 454,968 + B158DRAFT_2289 0.72 +2.1 454,969 + B158DRAFT_2289 0.72 +3.6 455,007 + B158DRAFT_2289 0.79 -0.1 455,007 + B158DRAFT_2289 0.79 +1.6 455,007 + B158DRAFT_2289 0.79 -1.3 455,007 + B158DRAFT_2289 0.79 +0.9 455,015 - B158DRAFT_2289 0.80 -1.0 455,015 - B158DRAFT_2289 0.80 -0.1 455,015 - B158DRAFT_2289 0.80 -1.8 455,015 - B158DRAFT_2289 0.80 -0.7 455,044 + B158DRAFT_2289 0.85 +0.0 455,069 + B158DRAFT_2289 0.89 +0.9 455,077 - +0.7 455,093 + -1.0 455,122 - -1.0 455,129 - -1.5 455,137 + -1.3 455,137 + -1.6 455,224 + B158DRAFT_2290 0.15 +0.4 455,230 + B158DRAFT_2290 0.16 -1.1 455,246 - B158DRAFT_2290 0.19 -0.2 455,276 + B158DRAFT_2290 0.24 -0.9 455,279 - B158DRAFT_2290 0.24 -1.1 455,349 - B158DRAFT_2290 0.36 -0.3 455,391 + B158DRAFT_2290 0.43 -1.5 455,398 + B158DRAFT_2290 0.44 +0.6 455,409 + B158DRAFT_2290 0.46 +1.5 455,412 - B158DRAFT_2290 0.46 -1.2 455,412 - B158DRAFT_2290 0.46 -1.0 455,420 - B158DRAFT_2290 0.48 +0.6 455,591 + B158DRAFT_2290 0.76 -1.0 455,606 + B158DRAFT_2290 0.78 -0.4 455,614 - B158DRAFT_2290 0.79 +0.4 455,727 + -0.5 455,792 + -1.2 455,795 - -0.0 455,799 + +1.6 455,828 + B158DRAFT_2291 0.13 -1.2 455,836 + B158DRAFT_2291 0.14 -0.4 455,836 + B158DRAFT_2291 0.14 +1.3 455,836 - B158DRAFT_2291 0.14 -0.3 455,836 - B158DRAFT_2291 0.14 -0.6 455,844 - B158DRAFT_2291 0.15 +1.8 455,844 - B158DRAFT_2291 0.15 +0.2 455,844 - B158DRAFT_2291 0.15 -0.6 455,845 - B158DRAFT_2291 0.15 -0.3 455,927 - B158DRAFT_2291 0.25 -1.2 455,949 + B158DRAFT_2291 0.28 -0.0 455,957 - B158DRAFT_2291 0.29 -1.1 456,064 - B158DRAFT_2291 0.42 -0.6 456,126 + B158DRAFT_2291 0.50 +0.8
Or see this region's nucleotide sequence