Experiment: m.b. Cholin acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2158 and B158DRAFT_2159 are separated by 4 nucleotides B158DRAFT_2159 and B158DRAFT_2160 are separated by 116 nucleotides B158DRAFT_2160 and B158DRAFT_2161 overlap by 1 nucleotides
B158DRAFT_2158: B158DRAFT_2158 - Predicted SAM-dependent methyltransferase, at 297,085 to 298,161
_2158
B158DRAFT_2159: B158DRAFT_2159 - 7-cyano-7-deazaguanine reductase, at 298,166 to 299,002
_2159
B158DRAFT_2160: B158DRAFT_2160 - sulfite reductase (NADPH) alpha subunit (EC 1.8.1.2), at 299,119 to 300,960
_2160
B158DRAFT_2161: B158DRAFT_2161 - sulfite reductase (NADPH) beta subunit (EC 1.8.1.2), at 300,960 to 302,666
_2161
Position (kb)
299
300
301 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.187 kb on + strand at 298.200 kb on - strand at 298.233 kb on + strand at 298.336 kb on - strand, within B158DRAFT_2159 at 298.374 kb on + strand, within B158DRAFT_2159 at 298.410 kb on + strand, within B158DRAFT_2159 at 298.428 kb on + strand, within B158DRAFT_2159 at 298.449 kb on + strand, within B158DRAFT_2159 at 298.517 kb on + strand, within B158DRAFT_2159 at 298.552 kb on + strand, within B158DRAFT_2159 at 298.574 kb on + strand, within B158DRAFT_2159 at 298.625 kb on - strand, within B158DRAFT_2159 at 298.625 kb on - strand, within B158DRAFT_2159 at 298.625 kb on - strand, within B158DRAFT_2159 at 298.625 kb on - strand, within B158DRAFT_2159 at 298.652 kb on - strand, within B158DRAFT_2159 at 298.705 kb on + strand, within B158DRAFT_2159 at 298.887 kb on + strand, within B158DRAFT_2159 at 298.887 kb on + strand, within B158DRAFT_2159 at 298.974 kb on + strand at 298.974 kb on + strand at 298.979 kb on + strand at 298.979 kb on + strand at 298.979 kb on + strand at 298.982 kb on - strand at 298.984 kb on + strand at 298.987 kb on - strand at 299.101 kb on - strand at 299.102 kb on - strand at 299.146 kb on + strand at 299.196 kb on + strand at 299.201 kb on + strand at 299.204 kb on - strand at 299.204 kb on - strand at 299.204 kb on - strand at 299.204 kb on - strand at 299.204 kb on - strand at 299.204 kb on - strand at 299.209 kb on - strand at 299.234 kb on + strand at 299.234 kb on + strand at 299.234 kb on + strand at 299.234 kb on + strand at 299.234 kb on + strand at 299.242 kb on - strand at 299.242 kb on - strand at 299.242 kb on - strand at 299.288 kb on + strand at 299.288 kb on + strand at 299.288 kb on + strand at 299.296 kb on - strand at 299.398 kb on + strand, within B158DRAFT_2160 at 299.408 kb on - strand, within B158DRAFT_2160 at 299.486 kb on + strand, within B158DRAFT_2160 at 299.486 kb on + strand, within B158DRAFT_2160 at 299.486 kb on + strand, within B158DRAFT_2160 at 299.486 kb on + strand, within B158DRAFT_2160 at 299.494 kb on - strand, within B158DRAFT_2160 at 299.517 kb on - strand, within B158DRAFT_2160 at 299.539 kb on + strand, within B158DRAFT_2160 at 299.584 kb on + strand, within B158DRAFT_2160 at 299.696 kb on + strand, within B158DRAFT_2160 at 299.729 kb on + strand, within B158DRAFT_2160 at 299.907 kb on - strand, within B158DRAFT_2160 at 300.022 kb on + strand, within B158DRAFT_2160 at 300.085 kb on + strand, within B158DRAFT_2160 at 300.293 kb on - strand, within B158DRAFT_2160 at 300.418 kb on + strand, within B158DRAFT_2160 at 300.418 kb on + strand, within B158DRAFT_2160 at 300.426 kb on - strand, within B158DRAFT_2160 at 300.428 kb on + strand, within B158DRAFT_2160 at 300.428 kb on + strand, within B158DRAFT_2160 at 300.512 kb on - strand, within B158DRAFT_2160 at 300.512 kb on - strand, within B158DRAFT_2160 at 300.524 kb on + strand, within B158DRAFT_2160 at 300.688 kb on + strand, within B158DRAFT_2160 at 300.747 kb on + strand, within B158DRAFT_2160 at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.785 kb on + strand at 300.793 kb on - strand at 300.793 kb on - strand at 300.793 kb on - strand at 300.793 kb on - strand at 300.810 kb on + strand at 300.880 kb on + strand at 300.921 kb on + strand at 300.921 kb on + strand at 300.921 kb on + strand at 300.921 kb on + strand at 300.929 kb on - strand at 300.948 kb on - strand at 300.967 kb on + strand at 301.123 kb on + strand at 301.123 kb on + strand at 301.149 kb on - strand, within B158DRAFT_2161 at 301.194 kb on + strand, within B158DRAFT_2161 at 301.200 kb on - strand, within B158DRAFT_2161 at 301.416 kb on + strand, within B158DRAFT_2161 at 301.505 kb on + strand, within B158DRAFT_2161 at 301.553 kb on - strand, within B158DRAFT_2161 at 301.562 kb on + strand, within B158DRAFT_2161 at 301.728 kb on + strand, within B158DRAFT_2161 at 301.751 kb on + strand, within B158DRAFT_2161 at 301.803 kb on - strand, within B158DRAFT_2161 at 301.843 kb on + strand, within B158DRAFT_2161 at 301.851 kb on - strand, within B158DRAFT_2161 at 301.851 kb on - strand, within B158DRAFT_2161 at 301.897 kb on - strand, within B158DRAFT_2161
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM remove 298,156 + -0.6 298,156 + -0.3 298,156 + +0.5 298,156 + -0.6 298,156 + -0.3 298,156 + +2.3 298,156 + -0.2 298,156 + -0.8 298,156 + -0.4 298,156 + -1.1 298,164 - +0.5 298,164 - -1.4 298,164 - -1.5 298,164 - +0.7 298,164 - -0.9 298,164 - -0.9 298,164 - -1.3 298,164 - +0.0 298,187 + +0.3 298,200 - -1.9 298,233 + +0.1 298,336 - B158DRAFT_2159 0.20 -0.2 298,374 + B158DRAFT_2159 0.25 -1.9 298,410 + B158DRAFT_2159 0.29 -1.4 298,428 + B158DRAFT_2159 0.31 +0.7 298,449 + B158DRAFT_2159 0.34 -1.1 298,517 + B158DRAFT_2159 0.42 -0.5 298,552 + B158DRAFT_2159 0.46 -2.1 298,574 + B158DRAFT_2159 0.49 +0.4 298,625 - B158DRAFT_2159 0.55 -0.1 298,625 - B158DRAFT_2159 0.55 +1.3 298,625 - B158DRAFT_2159 0.55 +0.4 298,625 - B158DRAFT_2159 0.55 -0.8 298,652 - B158DRAFT_2159 0.58 +0.1 298,705 + B158DRAFT_2159 0.64 -1.0 298,887 + B158DRAFT_2159 0.86 +0.2 298,887 + B158DRAFT_2159 0.86 -2.4 298,974 + -1.8 298,974 + +0.6 298,979 + -1.4 298,979 + +0.9 298,979 + -1.0 298,982 - -0.5 298,984 + -0.3 298,987 - -2.5 299,101 - +0.4 299,102 - -0.1 299,146 + -1.2 299,196 + +2.8 299,201 + -1.0 299,204 - -0.1 299,204 - -1.5 299,204 - -0.5 299,204 - +0.2 299,204 - +0.1 299,204 - -0.6 299,209 - +2.9 299,234 + -1.0 299,234 + +0.5 299,234 + +0.4 299,234 + +0.3 299,234 + -0.4 299,242 - -0.8 299,242 - -0.3 299,242 - -1.3 299,288 + -1.2 299,288 + -1.2 299,288 + -2.3 299,296 - +0.8 299,398 + B158DRAFT_2160 0.15 +2.2 299,408 - B158DRAFT_2160 0.16 -0.3 299,486 + B158DRAFT_2160 0.20 -2.1 299,486 + B158DRAFT_2160 0.20 -0.4 299,486 + B158DRAFT_2160 0.20 -1.2 299,486 + B158DRAFT_2160 0.20 -1.1 299,494 - B158DRAFT_2160 0.20 +1.2 299,517 - B158DRAFT_2160 0.22 -1.0 299,539 + B158DRAFT_2160 0.23 +0.2 299,584 + B158DRAFT_2160 0.25 +1.2 299,696 + B158DRAFT_2160 0.31 -0.4 299,729 + B158DRAFT_2160 0.33 -0.4 299,907 - B158DRAFT_2160 0.43 -0.7 300,022 + B158DRAFT_2160 0.49 +1.5 300,085 + B158DRAFT_2160 0.52 +0.5 300,293 - B158DRAFT_2160 0.64 +0.3 300,418 + B158DRAFT_2160 0.71 +2.5 300,418 + B158DRAFT_2160 0.71 -1.5 300,426 - B158DRAFT_2160 0.71 -0.1 300,428 + B158DRAFT_2160 0.71 -1.5 300,428 + B158DRAFT_2160 0.71 -0.1 300,512 - B158DRAFT_2160 0.76 -1.0 300,512 - B158DRAFT_2160 0.76 -1.3 300,524 + B158DRAFT_2160 0.76 -1.1 300,688 + B158DRAFT_2160 0.85 -1.3 300,747 + B158DRAFT_2160 0.88 -0.7 300,785 + -1.0 300,785 + -0.7 300,785 + -1.1 300,785 + -2.5 300,785 + +0.5 300,785 + -0.8 300,785 + -0.0 300,785 + +1.1 300,785 + -0.1 300,785 + -0.3 300,785 + -0.1 300,793 - -0.3 300,793 - -0.1 300,793 - -0.9 300,793 - -1.3 300,810 + +0.2 300,880 + +2.2 300,921 + -0.3 300,921 + +0.7 300,921 + -0.5 300,921 + +0.0 300,929 - +0.5 300,948 - +0.3 300,967 + -0.8 301,123 + -1.6 301,123 + +0.9 301,149 - B158DRAFT_2161 0.11 -0.7 301,194 + B158DRAFT_2161 0.14 -2.2 301,200 - B158DRAFT_2161 0.14 -0.9 301,416 + B158DRAFT_2161 0.27 -0.6 301,505 + B158DRAFT_2161 0.32 -0.1 301,553 - B158DRAFT_2161 0.35 +0.2 301,562 + B158DRAFT_2161 0.35 -0.5 301,728 + B158DRAFT_2161 0.45 -0.9 301,751 + B158DRAFT_2161 0.46 -1.2 301,803 - B158DRAFT_2161 0.49 -0.6 301,843 + B158DRAFT_2161 0.52 -0.2 301,851 - B158DRAFT_2161 0.52 -0.1 301,851 - B158DRAFT_2161 0.52 -0.1 301,897 - B158DRAFT_2161 0.55 -1.1
Or see this region's nucleotide sequence