Experiment: m.b. Cholin acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1642 and B158DRAFT_1643 are separated by 18 nucleotides B158DRAFT_1643 and B158DRAFT_1644 overlap by 11 nucleotides
B158DRAFT_1642: B158DRAFT_1642 - hypothetical protein, at 1,708,887 to 1,712,168
_1642
B158DRAFT_1643: B158DRAFT_1643 - Restriction endonuclease S subunits, at 1,712,187 to 1,713,545
_1643
B158DRAFT_1644: B158DRAFT_1644 - Type I restriction-modification system methyltransferase subunit, at 1,713,535 to 1,715,127
_1644
Position (kb)
1712
1713
1714 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1711.233 kb on - strand, within B158DRAFT_1642 at 1711.682 kb on + strand, within B158DRAFT_1642 at 1712.018 kb on + strand at 1712.046 kb on + strand at 1712.054 kb on - strand at 1712.072 kb on - strand at 1712.137 kb on - strand at 1712.393 kb on - strand, within B158DRAFT_1643 at 1712.421 kb on + strand, within B158DRAFT_1643 at 1712.429 kb on - strand, within B158DRAFT_1643 at 1712.429 kb on - strand, within B158DRAFT_1643 at 1712.435 kb on - strand, within B158DRAFT_1643 at 1712.435 kb on - strand, within B158DRAFT_1643 at 1712.485 kb on + strand, within B158DRAFT_1643 at 1712.485 kb on + strand, within B158DRAFT_1643 at 1712.488 kb on - strand, within B158DRAFT_1643 at 1712.567 kb on + strand, within B158DRAFT_1643 at 1712.575 kb on - strand, within B158DRAFT_1643 at 1712.575 kb on - strand, within B158DRAFT_1643 at 1712.619 kb on + strand, within B158DRAFT_1643 at 1712.682 kb on + strand, within B158DRAFT_1643 at 1712.733 kb on - strand, within B158DRAFT_1643 at 1712.791 kb on + strand, within B158DRAFT_1643 at 1712.818 kb on - strand, within B158DRAFT_1643 at 1712.846 kb on + strand, within B158DRAFT_1643 at 1712.854 kb on - strand, within B158DRAFT_1643 at 1712.854 kb on - strand, within B158DRAFT_1643 at 1712.854 kb on - strand, within B158DRAFT_1643 at 1712.903 kb on - strand, within B158DRAFT_1643 at 1713.017 kb on + strand, within B158DRAFT_1643 at 1713.025 kb on - strand, within B158DRAFT_1643 at 1713.025 kb on - strand, within B158DRAFT_1643 at 1713.159 kb on + strand, within B158DRAFT_1643 at 1713.159 kb on + strand, within B158DRAFT_1643 at 1713.220 kb on - strand, within B158DRAFT_1643 at 1713.226 kb on + strand, within B158DRAFT_1643 at 1713.258 kb on - strand, within B158DRAFT_1643 at 1713.304 kb on + strand, within B158DRAFT_1643 at 1713.306 kb on + strand, within B158DRAFT_1643 at 1713.311 kb on + strand, within B158DRAFT_1643 at 1713.314 kb on - strand, within B158DRAFT_1643 at 1713.314 kb on - strand, within B158DRAFT_1643 at 1713.355 kb on - strand, within B158DRAFT_1643 at 1713.418 kb on + strand at 1713.536 kb on - strand at 1713.542 kb on + strand at 1713.554 kb on - strand at 1713.555 kb on - strand at 1713.555 kb on - strand at 1713.615 kb on + strand at 1713.623 kb on - strand at 1713.623 kb on - strand at 1713.649 kb on + strand at 1713.649 kb on + strand at 1713.690 kb on + strand at 1713.705 kb on - strand, within B158DRAFT_1644 at 1713.753 kb on - strand, within B158DRAFT_1644 at 1713.849 kb on + strand, within B158DRAFT_1644 at 1713.854 kb on + strand, within B158DRAFT_1644 at 1713.857 kb on - strand, within B158DRAFT_1644 at 1713.874 kb on - strand, within B158DRAFT_1644 at 1713.894 kb on + strand, within B158DRAFT_1644 at 1713.895 kb on + strand, within B158DRAFT_1644 at 1713.902 kb on - strand, within B158DRAFT_1644 at 1713.910 kb on - strand, within B158DRAFT_1644 at 1713.948 kb on - strand, within B158DRAFT_1644 at 1713.977 kb on - strand, within B158DRAFT_1644 at 1713.985 kb on + strand, within B158DRAFT_1644 at 1713.995 kb on + strand, within B158DRAFT_1644 at 1713.995 kb on + strand, within B158DRAFT_1644 at 1713.995 kb on + strand, within B158DRAFT_1644 at 1713.997 kb on + strand, within B158DRAFT_1644 at 1714.003 kb on - strand, within B158DRAFT_1644 at 1714.003 kb on - strand, within B158DRAFT_1644 at 1714.003 kb on - strand, within B158DRAFT_1644 at 1714.003 kb on - strand, within B158DRAFT_1644 at 1714.020 kb on + strand, within B158DRAFT_1644 at 1714.020 kb on + strand, within B158DRAFT_1644 at 1714.038 kb on - strand, within B158DRAFT_1644 at 1714.038 kb on - strand, within B158DRAFT_1644 at 1714.063 kb on + strand, within B158DRAFT_1644 at 1714.083 kb on + strand, within B158DRAFT_1644 at 1714.083 kb on + strand, within B158DRAFT_1644 at 1714.101 kb on - strand, within B158DRAFT_1644 at 1714.105 kb on + strand, within B158DRAFT_1644 at 1714.108 kb on - strand, within B158DRAFT_1644 at 1714.108 kb on - strand, within B158DRAFT_1644 at 1714.124 kb on + strand, within B158DRAFT_1644 at 1714.180 kb on + strand, within B158DRAFT_1644 at 1714.188 kb on - strand, within B158DRAFT_1644 at 1714.188 kb on - strand, within B158DRAFT_1644 at 1714.188 kb on - strand, within B158DRAFT_1644 at 1714.194 kb on + strand, within B158DRAFT_1644 at 1714.195 kb on + strand, within B158DRAFT_1644 at 1714.200 kb on + strand, within B158DRAFT_1644 at 1714.203 kb on - strand, within B158DRAFT_1644 at 1714.203 kb on - strand, within B158DRAFT_1644 at 1714.208 kb on - strand, within B158DRAFT_1644 at 1714.215 kb on + strand, within B158DRAFT_1644 at 1714.218 kb on - strand, within B158DRAFT_1644 at 1714.238 kb on - strand, within B158DRAFT_1644 at 1714.341 kb on + strand, within B158DRAFT_1644 at 1714.349 kb on - strand, within B158DRAFT_1644 at 1714.349 kb on - strand, within B158DRAFT_1644 at 1714.349 kb on - strand, within B158DRAFT_1644 at 1714.349 kb on - strand, within B158DRAFT_1644 at 1714.349 kb on - strand, within B158DRAFT_1644 at 1714.349 kb on - strand, within B158DRAFT_1644 at 1714.350 kb on - strand, within B158DRAFT_1644 at 1714.355 kb on + strand, within B158DRAFT_1644 at 1714.383 kb on + strand, within B158DRAFT_1644 at 1714.394 kb on + strand, within B158DRAFT_1644 at 1714.399 kb on + strand, within B158DRAFT_1644 at 1714.400 kb on + strand, within B158DRAFT_1644 at 1714.407 kb on - strand, within B158DRAFT_1644 at 1714.407 kb on - strand, within B158DRAFT_1644 at 1714.408 kb on - strand, within B158DRAFT_1644 at 1714.477 kb on + strand, within B158DRAFT_1644 at 1714.488 kb on + strand, within B158DRAFT_1644 at 1714.524 kb on + strand, within B158DRAFT_1644
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM remove 1,711,233 - B158DRAFT_1642 0.71 +1.1 1,711,682 + B158DRAFT_1642 0.85 -1.3 1,712,018 + -0.7 1,712,046 + +0.9 1,712,054 - -1.0 1,712,072 - -1.9 1,712,137 - -1.6 1,712,393 - B158DRAFT_1643 0.15 -0.9 1,712,421 + B158DRAFT_1643 0.17 -2.1 1,712,429 - B158DRAFT_1643 0.18 -1.4 1,712,429 - B158DRAFT_1643 0.18 +1.7 1,712,435 - B158DRAFT_1643 0.18 -0.1 1,712,435 - B158DRAFT_1643 0.18 +0.5 1,712,485 + B158DRAFT_1643 0.22 -0.6 1,712,485 + B158DRAFT_1643 0.22 -0.3 1,712,488 - B158DRAFT_1643 0.22 -2.4 1,712,567 + B158DRAFT_1643 0.28 +0.1 1,712,575 - B158DRAFT_1643 0.29 -1.2 1,712,575 - B158DRAFT_1643 0.29 +0.1 1,712,619 + B158DRAFT_1643 0.32 +0.0 1,712,682 + B158DRAFT_1643 0.36 -1.0 1,712,733 - B158DRAFT_1643 0.40 -0.8 1,712,791 + B158DRAFT_1643 0.44 -0.3 1,712,818 - B158DRAFT_1643 0.46 -1.0 1,712,846 + B158DRAFT_1643 0.48 -1.8 1,712,854 - B158DRAFT_1643 0.49 +0.1 1,712,854 - B158DRAFT_1643 0.49 -0.7 1,712,854 - B158DRAFT_1643 0.49 -1.6 1,712,903 - B158DRAFT_1643 0.53 +0.2 1,713,017 + B158DRAFT_1643 0.61 -0.8 1,713,025 - B158DRAFT_1643 0.62 -1.3 1,713,025 - B158DRAFT_1643 0.62 +0.1 1,713,159 + B158DRAFT_1643 0.72 -1.3 1,713,159 + B158DRAFT_1643 0.72 +0.0 1,713,220 - B158DRAFT_1643 0.76 +0.5 1,713,226 + B158DRAFT_1643 0.76 +2.2 1,713,258 - B158DRAFT_1643 0.79 +1.7 1,713,304 + B158DRAFT_1643 0.82 -0.7 1,713,306 + B158DRAFT_1643 0.82 -2.1 1,713,311 + B158DRAFT_1643 0.83 -1.2 1,713,314 - B158DRAFT_1643 0.83 -0.7 1,713,314 - B158DRAFT_1643 0.83 -0.8 1,713,355 - B158DRAFT_1643 0.86 -0.1 1,713,418 + +0.1 1,713,536 - -2.6 1,713,542 + -1.3 1,713,554 - -0.4 1,713,555 - -0.0 1,713,555 - -2.2 1,713,615 + -0.3 1,713,623 - -2.1 1,713,623 - -0.9 1,713,649 + +0.8 1,713,649 + -0.1 1,713,690 + -1.2 1,713,705 - B158DRAFT_1644 0.11 -0.4 1,713,753 - B158DRAFT_1644 0.14 -1.1 1,713,849 + B158DRAFT_1644 0.20 +0.8 1,713,854 + B158DRAFT_1644 0.20 -0.9 1,713,857 - B158DRAFT_1644 0.20 -0.9 1,713,874 - B158DRAFT_1644 0.21 +0.7 1,713,894 + B158DRAFT_1644 0.23 -0.6 1,713,895 + B158DRAFT_1644 0.23 -0.6 1,713,902 - B158DRAFT_1644 0.23 -1.6 1,713,910 - B158DRAFT_1644 0.24 +1.6 1,713,948 - B158DRAFT_1644 0.26 -0.7 1,713,977 - B158DRAFT_1644 0.28 -1.3 1,713,985 + B158DRAFT_1644 0.28 -1.4 1,713,995 + B158DRAFT_1644 0.29 -1.0 1,713,995 + B158DRAFT_1644 0.29 -1.0 1,713,995 + B158DRAFT_1644 0.29 -1.0 1,713,997 + B158DRAFT_1644 0.29 +0.3 1,714,003 - B158DRAFT_1644 0.29 +0.1 1,714,003 - B158DRAFT_1644 0.29 +0.6 1,714,003 - B158DRAFT_1644 0.29 +0.0 1,714,003 - B158DRAFT_1644 0.29 +0.1 1,714,020 + B158DRAFT_1644 0.30 -1.6 1,714,020 + B158DRAFT_1644 0.30 -1.2 1,714,038 - B158DRAFT_1644 0.32 +0.1 1,714,038 - B158DRAFT_1644 0.32 -0.5 1,714,063 + B158DRAFT_1644 0.33 -0.1 1,714,083 + B158DRAFT_1644 0.34 -0.2 1,714,083 + B158DRAFT_1644 0.34 -1.5 1,714,101 - B158DRAFT_1644 0.36 -0.9 1,714,105 + B158DRAFT_1644 0.36 +0.0 1,714,108 - B158DRAFT_1644 0.36 -0.0 1,714,108 - B158DRAFT_1644 0.36 +0.5 1,714,124 + B158DRAFT_1644 0.37 -0.3 1,714,180 + B158DRAFT_1644 0.40 -0.3 1,714,188 - B158DRAFT_1644 0.41 -0.8 1,714,188 - B158DRAFT_1644 0.41 -0.8 1,714,188 - B158DRAFT_1644 0.41 -1.2 1,714,194 + B158DRAFT_1644 0.41 -0.7 1,714,195 + B158DRAFT_1644 0.41 -0.2 1,714,200 + B158DRAFT_1644 0.42 -0.1 1,714,203 - B158DRAFT_1644 0.42 +0.6 1,714,203 - B158DRAFT_1644 0.42 +1.6 1,714,208 - B158DRAFT_1644 0.42 -1.2 1,714,215 + B158DRAFT_1644 0.43 +0.5 1,714,218 - B158DRAFT_1644 0.43 -0.6 1,714,238 - B158DRAFT_1644 0.44 -1.9 1,714,341 + B158DRAFT_1644 0.51 -0.6 1,714,349 - B158DRAFT_1644 0.51 -0.1 1,714,349 - B158DRAFT_1644 0.51 -0.8 1,714,349 - B158DRAFT_1644 0.51 +0.5 1,714,349 - B158DRAFT_1644 0.51 -1.4 1,714,349 - B158DRAFT_1644 0.51 -0.7 1,714,349 - B158DRAFT_1644 0.51 -1.4 1,714,350 - B158DRAFT_1644 0.51 -0.7 1,714,355 + B158DRAFT_1644 0.51 -0.7 1,714,383 + B158DRAFT_1644 0.53 -0.2 1,714,394 + B158DRAFT_1644 0.54 -0.6 1,714,399 + B158DRAFT_1644 0.54 -2.2 1,714,400 + B158DRAFT_1644 0.54 -0.8 1,714,407 - B158DRAFT_1644 0.55 -0.3 1,714,407 - B158DRAFT_1644 0.55 -1.9 1,714,408 - B158DRAFT_1644 0.55 -1.5 1,714,477 + B158DRAFT_1644 0.59 +0.1 1,714,488 + B158DRAFT_1644 0.60 -1.9 1,714,524 + B158DRAFT_1644 0.62 +0.0
Or see this region's nucleotide sequence