Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0847

Experiment: m.b. Cholin acetate 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0844 and B158DRAFT_0845 are separated by 59 nucleotidesB158DRAFT_0845 and B158DRAFT_0846 are separated by 12 nucleotidesB158DRAFT_0846 and B158DRAFT_0847 are separated by 11 nucleotidesB158DRAFT_0847 and B158DRAFT_0848 are separated by 37 nucleotidesB158DRAFT_0848 and B158DRAFT_0849 are separated by 177 nucleotides B158DRAFT_0844: B158DRAFT_0844 - Uncharacterized conserved protein, at 859,225 to 860,721 _0844 B158DRAFT_0845: B158DRAFT_0845 - hypothetical protein, at 860,781 to 861,281 _0845 B158DRAFT_0846: B158DRAFT_0846 - Colicin D., at 861,294 to 861,563 _0846 B158DRAFT_0847: B158DRAFT_0847 - Zn-dependent protease with chaperone function, at 861,575 to 863,533 _0847 B158DRAFT_0848: B158DRAFT_0848 - Uncharacterized conserved protein, at 863,571 to 864,158 _0848 B158DRAFT_0849: B158DRAFT_0849 - Glutamine synthetase adenylyltransferase, at 864,336 to 867,215 _0849 Position (kb) 861 862 863 864Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 860.575 kb on - strandat 860.575 kb on - strandat 860.575 kb on - strandat 860.575 kb on - strandat 860.730 kb on + strandat 860.738 kb on - strandat 861.065 kb on + strand, within B158DRAFT_0845at 861.071 kb on - strand, within B158DRAFT_0845at 861.508 kb on + strand, within B158DRAFT_0846at 861.772 kb on + strand, within B158DRAFT_0847at 861.782 kb on + strand, within B158DRAFT_0847at 861.810 kb on + strand, within B158DRAFT_0847at 861.816 kb on + strand, within B158DRAFT_0847at 861.823 kb on - strand, within B158DRAFT_0847at 861.862 kb on + strand, within B158DRAFT_0847at 861.862 kb on + strand, within B158DRAFT_0847at 861.901 kb on - strand, within B158DRAFT_0847at 861.903 kb on + strand, within B158DRAFT_0847at 861.905 kb on + strand, within B158DRAFT_0847at 861.911 kb on - strand, within B158DRAFT_0847at 861.911 kb on - strand, within B158DRAFT_0847at 861.911 kb on - strand, within B158DRAFT_0847at 861.911 kb on - strand, within B158DRAFT_0847at 861.913 kb on - strand, within B158DRAFT_0847at 861.923 kb on - strand, within B158DRAFT_0847at 861.951 kb on + strand, within B158DRAFT_0847at 861.971 kb on + strand, within B158DRAFT_0847at 861.979 kb on + strand, within B158DRAFT_0847at 862.012 kb on + strand, within B158DRAFT_0847at 862.012 kb on + strand, within B158DRAFT_0847at 862.012 kb on + strand, within B158DRAFT_0847at 862.014 kb on + strand, within B158DRAFT_0847at 862.014 kb on + strand, within B158DRAFT_0847at 862.014 kb on + strand, within B158DRAFT_0847at 862.107 kb on - strand, within B158DRAFT_0847at 862.107 kb on - strand, within B158DRAFT_0847at 862.107 kb on - strand, within B158DRAFT_0847at 862.352 kb on - strand, within B158DRAFT_0847at 862.352 kb on - strand, within B158DRAFT_0847at 862.352 kb on - strand, within B158DRAFT_0847at 862.352 kb on - strand, within B158DRAFT_0847at 862.410 kb on - strand, within B158DRAFT_0847at 862.410 kb on - strand, within B158DRAFT_0847at 862.410 kb on - strand, within B158DRAFT_0847at 862.410 kb on - strand, within B158DRAFT_0847at 862.717 kb on - strand, within B158DRAFT_0847at 862.735 kb on - strand, within B158DRAFT_0847at 863.035 kb on - strand, within B158DRAFT_0847at 863.059 kb on - strand, within B158DRAFT_0847at 863.062 kb on + strand, within B158DRAFT_0847at 863.070 kb on - strand, within B158DRAFT_0847at 863.077 kb on + strand, within B158DRAFT_0847at 863.155 kb on + strand, within B158DRAFT_0847at 863.166 kb on - strand, within B158DRAFT_0847at 863.194 kb on + strand, within B158DRAFT_0847at 863.254 kb on + strand, within B158DRAFT_0847at 863.254 kb on - strand, within B158DRAFT_0847at 863.275 kb on + strand, within B158DRAFT_0847at 863.276 kb on - strand, within B158DRAFT_0847at 863.295 kb on - strand, within B158DRAFT_0847at 863.295 kb on - strand, within B158DRAFT_0847at 863.295 kb on - strand, within B158DRAFT_0847at 863.370 kb on - strandat 863.403 kb on - strandat 863.450 kb on + strandat 863.697 kb on - strand, within B158DRAFT_0848at 863.726 kb on - strand, within B158DRAFT_0848at 863.726 kb on - strand, within B158DRAFT_0848at 863.752 kb on + strand, within B158DRAFT_0848at 863.798 kb on + strand, within B158DRAFT_0848at 863.811 kb on - strand, within B158DRAFT_0848at 863.832 kb on + strand, within B158DRAFT_0848at 863.840 kb on - strand, within B158DRAFT_0848at 863.840 kb on - strand, within B158DRAFT_0848at 864.087 kb on - strand, within B158DRAFT_0848at 864.135 kb on - strandat 864.137 kb on - strandat 864.256 kb on + strandat 864.352 kb on - strandat 864.378 kb on + strandat 864.400 kb on + strandat 864.400 kb on + strandat 864.408 kb on - strandat 864.408 kb on - strandat 864.410 kb on + strandat 864.427 kb on - strandat 864.432 kb on - strandat 864.443 kb on + strandat 864.443 kb on + strandat 864.443 kb on + strandat 864.451 kb on - strandat 864.451 kb on - strandat 864.451 kb on - strandat 864.480 kb on - strandat 864.528 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM
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860,575 - -0.2
860,575 - -0.9
860,575 - -0.7
860,575 - -1.1
860,730 + -0.9
860,738 - -1.1
861,065 + B158DRAFT_0845 0.57 -1.6
861,071 - B158DRAFT_0845 0.58 -0.6
861,508 + B158DRAFT_0846 0.79 -0.4
861,772 + B158DRAFT_0847 0.10 -2.8
861,782 + B158DRAFT_0847 0.11 -0.9
861,810 + B158DRAFT_0847 0.12 -0.5
861,816 + B158DRAFT_0847 0.12 -1.1
861,823 - B158DRAFT_0847 0.13 -0.9
861,862 + B158DRAFT_0847 0.15 -2.4
861,862 + B158DRAFT_0847 0.15 +0.6
861,901 - B158DRAFT_0847 0.17 -0.4
861,903 + B158DRAFT_0847 0.17 -1.4
861,905 + B158DRAFT_0847 0.17 -0.7
861,911 - B158DRAFT_0847 0.17 +1.4
861,911 - B158DRAFT_0847 0.17 -1.3
861,911 - B158DRAFT_0847 0.17 +0.6
861,911 - B158DRAFT_0847 0.17 -0.5
861,913 - B158DRAFT_0847 0.17 +0.2
861,923 - B158DRAFT_0847 0.18 -1.0
861,951 + B158DRAFT_0847 0.19 -0.8
861,971 + B158DRAFT_0847 0.20 -0.2
861,979 + B158DRAFT_0847 0.21 +1.4
862,012 + B158DRAFT_0847 0.22 +0.7
862,012 + B158DRAFT_0847 0.22 +1.9
862,012 + B158DRAFT_0847 0.22 -1.4
862,014 + B158DRAFT_0847 0.22 -0.2
862,014 + B158DRAFT_0847 0.22 -0.4
862,014 + B158DRAFT_0847 0.22 -0.5
862,107 - B158DRAFT_0847 0.27 -0.1
862,107 - B158DRAFT_0847 0.27 -1.0
862,107 - B158DRAFT_0847 0.27 -0.9
862,352 - B158DRAFT_0847 0.40 -1.6
862,352 - B158DRAFT_0847 0.40 -0.2
862,352 - B158DRAFT_0847 0.40 -0.3
862,352 - B158DRAFT_0847 0.40 +1.4
862,410 - B158DRAFT_0847 0.43 -0.6
862,410 - B158DRAFT_0847 0.43 -1.3
862,410 - B158DRAFT_0847 0.43 -2.1
862,410 - B158DRAFT_0847 0.43 -1.6
862,717 - B158DRAFT_0847 0.58 -1.6
862,735 - B158DRAFT_0847 0.59 -0.4
863,035 - B158DRAFT_0847 0.75 -1.2
863,059 - B158DRAFT_0847 0.76 +0.8
863,062 + B158DRAFT_0847 0.76 +0.9
863,070 - B158DRAFT_0847 0.76 -0.4
863,077 + B158DRAFT_0847 0.77 -0.3
863,155 + B158DRAFT_0847 0.81 -1.1
863,166 - B158DRAFT_0847 0.81 -1.6
863,194 + B158DRAFT_0847 0.83 -0.5
863,254 + B158DRAFT_0847 0.86 -0.3
863,254 - B158DRAFT_0847 0.86 +0.0
863,275 + B158DRAFT_0847 0.87 +0.4
863,276 - B158DRAFT_0847 0.87 -1.8
863,295 - B158DRAFT_0847 0.88 -0.9
863,295 - B158DRAFT_0847 0.88 +0.4
863,295 - B158DRAFT_0847 0.88 -1.0
863,370 - -1.6
863,403 - -0.8
863,450 + -0.8
863,697 - B158DRAFT_0848 0.21 -1.1
863,726 - B158DRAFT_0848 0.26 -0.9
863,726 - B158DRAFT_0848 0.26 -0.3
863,752 + B158DRAFT_0848 0.31 -1.4
863,798 + B158DRAFT_0848 0.39 +0.1
863,811 - B158DRAFT_0848 0.41 -1.9
863,832 + B158DRAFT_0848 0.44 -0.3
863,840 - B158DRAFT_0848 0.46 -0.9
863,840 - B158DRAFT_0848 0.46 -2.3
864,087 - B158DRAFT_0848 0.88 -0.0
864,135 - -0.4
864,137 - -0.8
864,256 + -0.8
864,352 - -2.1
864,378 + -1.1
864,400 + +1.8
864,400 + -2.1
864,408 - -1.1
864,408 - -1.2
864,410 + -0.1
864,427 - +2.1
864,432 - -1.7
864,443 + +3.2
864,443 + -1.3
864,443 + -1.2
864,451 - -2.1
864,451 - -0.7
864,451 - -2.4
864,480 - +0.5
864,528 + -1.5

Or see this region's nucleotide sequence