Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0608

Experiment: m.b. Cholin acetate 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0607 and B158DRAFT_0608 are separated by 190 nucleotidesB158DRAFT_0608 and B158DRAFT_0609 are separated by 357 nucleotides B158DRAFT_0607: B158DRAFT_0607 - Beta-lactamase class C and other penicillin binding proteins, at 611,203 to 613,095 _0607 B158DRAFT_0608: B158DRAFT_0608 - chaperone protein DnaK, at 613,286 to 615,217 _0608 B158DRAFT_0609: B158DRAFT_0609 - chaperone protein DnaJ, at 615,575 to 616,705 _0609 Position (kb) 613 614 615 616Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 612.312 kb on + strand, within B158DRAFT_0607at 612.343 kb on + strand, within B158DRAFT_0607at 612.343 kb on + strand, within B158DRAFT_0607at 612.343 kb on + strand, within B158DRAFT_0607at 612.343 kb on + strand, within B158DRAFT_0607at 612.343 kb on + strand, within B158DRAFT_0607at 612.343 kb on + strand, within B158DRAFT_0607at 612.343 kb on + strand, within B158DRAFT_0607at 612.343 kb on + strand, within B158DRAFT_0607at 612.351 kb on - strand, within B158DRAFT_0607at 612.351 kb on - strand, within B158DRAFT_0607at 612.351 kb on - strand, within B158DRAFT_0607at 612.351 kb on - strand, within B158DRAFT_0607at 612.351 kb on - strand, within B158DRAFT_0607at 612.351 kb on - strand, within B158DRAFT_0607at 612.383 kb on + strand, within B158DRAFT_0607at 612.384 kb on + strand, within B158DRAFT_0607at 612.384 kb on + strand, within B158DRAFT_0607at 612.391 kb on - strand, within B158DRAFT_0607at 612.411 kb on + strand, within B158DRAFT_0607at 612.416 kb on + strand, within B158DRAFT_0607at 612.587 kb on - strand, within B158DRAFT_0607at 612.587 kb on - strand, within B158DRAFT_0607at 612.594 kb on + strand, within B158DRAFT_0607at 612.596 kb on + strand, within B158DRAFT_0607at 612.669 kb on + strand, within B158DRAFT_0607at 612.687 kb on - strand, within B158DRAFT_0607at 612.710 kb on + strand, within B158DRAFT_0607at 612.734 kb on + strand, within B158DRAFT_0607at 612.734 kb on + strand, within B158DRAFT_0607at 612.742 kb on - strand, within B158DRAFT_0607at 612.742 kb on - strand, within B158DRAFT_0607at 612.771 kb on - strand, within B158DRAFT_0607at 612.827 kb on + strand, within B158DRAFT_0607at 612.841 kb on + strand, within B158DRAFT_0607at 613.080 kb on - strandat 613.080 kb on - strandat 613.126 kb on + strandat 613.126 kb on + strandat 613.134 kb on - strandat 613.134 kb on - strandat 613.134 kb on - strandat 613.186 kb on + strandat 613.186 kb on + strandat 613.493 kb on + strand, within B158DRAFT_0608at 613.991 kb on + strand, within B158DRAFT_0608at 614.320 kb on + strand, within B158DRAFT_0608at 614.410 kb on + strand, within B158DRAFT_0608at 614.649 kb on + strand, within B158DRAFT_0608at 614.782 kb on + strand, within B158DRAFT_0608at 614.866 kb on - strand, within B158DRAFT_0608at 615.082 kb on + strandat 615.109 kb on + strandat 615.111 kb on - strandat 615.119 kb on + strandat 615.127 kb on + strandat 615.149 kb on + strandat 615.149 kb on + strandat 615.149 kb on + strandat 615.149 kb on + strandat 615.276 kb on + strandat 615.278 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.476 kb on + strandat 615.512 kb on + strandat 615.522 kb on + strandat 615.522 kb on + strandat 615.522 kb on + strandat 615.522 kb on + strandat 615.522 kb on + strandat 615.924 kb on + strand, within B158DRAFT_0609at 615.924 kb on + strand, within B158DRAFT_0609at 615.987 kb on - strand, within B158DRAFT_0609at 616.006 kb on + strand, within B158DRAFT_0609at 616.050 kb on - strand, within B158DRAFT_0609at 616.054 kb on - strand, within B158DRAFT_0609at 616.087 kb on - strand, within B158DRAFT_0609at 616.129 kb on - strand, within B158DRAFT_0609at 616.134 kb on - strand, within B158DRAFT_0609at 616.134 kb on - strand, within B158DRAFT_0609at 616.139 kb on - strand, within B158DRAFT_0609at 616.146 kb on + strand, within B158DRAFT_0609at 616.151 kb on + strand, within B158DRAFT_0609at 616.154 kb on - strand, within B158DRAFT_0609at 616.159 kb on - strand, within B158DRAFT_0609at 616.168 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.187 kb on + strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609at 616.195 kb on - strand, within B158DRAFT_0609

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM
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612,312 + B158DRAFT_0607 0.59 -1.9
612,343 + B158DRAFT_0607 0.60 -1.2
612,343 + B158DRAFT_0607 0.60 -0.8
612,343 + B158DRAFT_0607 0.60 -1.7
612,343 + B158DRAFT_0607 0.60 -1.0
612,343 + B158DRAFT_0607 0.60 -2.2
612,343 + B158DRAFT_0607 0.60 +0.1
612,343 + B158DRAFT_0607 0.60 -1.7
612,343 + B158DRAFT_0607 0.60 +0.8
612,351 - B158DRAFT_0607 0.61 -1.4
612,351 - B158DRAFT_0607 0.61 -0.8
612,351 - B158DRAFT_0607 0.61 +0.2
612,351 - B158DRAFT_0607 0.61 +1.6
612,351 - B158DRAFT_0607 0.61 -0.2
612,351 - B158DRAFT_0607 0.61 -0.6
612,383 + B158DRAFT_0607 0.62 -1.1
612,384 + B158DRAFT_0607 0.62 -1.1
612,384 + B158DRAFT_0607 0.62 -0.4
612,391 - B158DRAFT_0607 0.63 -1.5
612,411 + B158DRAFT_0607 0.64 -1.1
612,416 + B158DRAFT_0607 0.64 -0.1
612,587 - B158DRAFT_0607 0.73 -1.0
612,587 - B158DRAFT_0607 0.73 -0.1
612,594 + B158DRAFT_0607 0.73 -1.0
612,596 + B158DRAFT_0607 0.74 -2.5
612,669 + B158DRAFT_0607 0.77 -0.2
612,687 - B158DRAFT_0607 0.78 -0.5
612,710 + B158DRAFT_0607 0.80 -0.7
612,734 + B158DRAFT_0607 0.81 -1.2
612,734 + B158DRAFT_0607 0.81 -0.2
612,742 - B158DRAFT_0607 0.81 +0.3
612,742 - B158DRAFT_0607 0.81 -0.8
612,771 - B158DRAFT_0607 0.83 -0.9
612,827 + B158DRAFT_0607 0.86 -0.1
612,841 + B158DRAFT_0607 0.87 -1.3
613,080 - -0.5
613,080 - +0.3
613,126 + +0.0
613,126 + -0.2
613,134 - +1.1
613,134 - +0.3
613,134 - +0.6
613,186 + +0.9
613,186 + -1.4
613,493 + B158DRAFT_0608 0.11 +3.0
613,991 + B158DRAFT_0608 0.36 +3.2
614,320 + B158DRAFT_0608 0.54 +3.6
614,410 + B158DRAFT_0608 0.58 +0.6
614,649 + B158DRAFT_0608 0.71 +0.2
614,782 + B158DRAFT_0608 0.77 +0.5
614,866 - B158DRAFT_0608 0.82 +2.1
615,082 + -1.0
615,109 + +1.7
615,111 - +1.4
615,119 + -2.8
615,127 + -2.6
615,149 + +0.4
615,149 + +1.7
615,149 + +2.1
615,149 + +1.6
615,276 + +1.0
615,278 + -0.5
615,476 + +0.1
615,476 + -0.4
615,476 + -2.1
615,476 + -0.7
615,476 + +0.9
615,476 + -0.6
615,476 + -0.5
615,476 + -0.5
615,476 + -1.3
615,476 + -2.1
615,476 + +0.8
615,512 + -0.9
615,522 + -0.6
615,522 + -1.0
615,522 + +1.7
615,522 + -1.6
615,522 + +1.0
615,924 + B158DRAFT_0609 0.31 +1.4
615,924 + B158DRAFT_0609 0.31 -3.5
615,987 - B158DRAFT_0609 0.36 -1.3
616,006 + B158DRAFT_0609 0.38 -1.1
616,050 - B158DRAFT_0609 0.42 -1.0
616,054 - B158DRAFT_0609 0.42 -1.3
616,087 - B158DRAFT_0609 0.45 +0.1
616,129 - B158DRAFT_0609 0.49 -0.2
616,134 - B158DRAFT_0609 0.49 -1.4
616,134 - B158DRAFT_0609 0.49 -1.8
616,139 - B158DRAFT_0609 0.50 -0.6
616,146 + B158DRAFT_0609 0.50 -1.0
616,151 + B158DRAFT_0609 0.51 -1.9
616,154 - B158DRAFT_0609 0.51 -2.2
616,159 - B158DRAFT_0609 0.52 +0.4
616,168 + B158DRAFT_0609 0.52 -1.9
616,187 + B158DRAFT_0609 0.54 +0.5
616,187 + B158DRAFT_0609 0.54 -0.1
616,187 + B158DRAFT_0609 0.54 +0.9
616,187 + B158DRAFT_0609 0.54 -0.9
616,187 + B158DRAFT_0609 0.54 -0.3
616,187 + B158DRAFT_0609 0.54 +0.2
616,195 - B158DRAFT_0609 0.55 -1.4
616,195 - B158DRAFT_0609 0.55 -3.0
616,195 - B158DRAFT_0609 0.55 +1.4
616,195 - B158DRAFT_0609 0.55 -2.8
616,195 - B158DRAFT_0609 0.55 -0.2

Or see this region's nucleotide sequence