Experiment: m.b. Cholin acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0596 and B158DRAFT_0597 overlap by 7 nucleotides B158DRAFT_0597 and B158DRAFT_0598 are separated by 17 nucleotides B158DRAFT_0598 and B158DRAFT_0599 are separated by 123 nucleotides B158DRAFT_0599 and B158DRAFT_0600 are separated by 319 nucleotides
B158DRAFT_0596: B158DRAFT_0596 - RNA polymerase sigma factor, sigma-70 family, at 602,321 to 602,971
_0596
B158DRAFT_0597: B158DRAFT_0597 - hypothetical protein, at 602,965 to 603,207
_0597
B158DRAFT_0598: B158DRAFT_0598 - Beta-barrel assembly machine subunit BamE, at 603,225 to 603,545
_0598
B158DRAFT_0599: B158DRAFT_0599 - Fe2+/Zn2+ uptake regulation proteins, at 603,669 to 604,070
_0599
B158DRAFT_0600: B158DRAFT_0600 - hypothetical protein, at 604,390 to 605,163
_0600
Position (kb) 603
604 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 602.248 kb on + strand at 602.364 kb on + strand at 602.364 kb on + strand at 602.365 kb on + strand at 602.373 kb on - strand at 602.382 kb on + strand at 602.384 kb on + strand at 602.407 kb on + strand, within B158DRAFT_0596 at 602.415 kb on - strand, within B158DRAFT_0596 at 602.415 kb on - strand, within B158DRAFT_0596 at 602.419 kb on + strand, within B158DRAFT_0596 at 602.451 kb on - strand, within B158DRAFT_0596 at 602.499 kb on + strand, within B158DRAFT_0596 at 602.499 kb on + strand, within B158DRAFT_0596 at 602.501 kb on + strand, within B158DRAFT_0596 at 602.507 kb on - strand, within B158DRAFT_0596 at 602.532 kb on + strand, within B158DRAFT_0596 at 602.542 kb on + strand, within B158DRAFT_0596 at 602.552 kb on - strand, within B158DRAFT_0596 at 602.639 kb on + strand, within B158DRAFT_0596 at 602.639 kb on + strand, within B158DRAFT_0596 at 602.639 kb on + strand, within B158DRAFT_0596 at 602.639 kb on + strand, within B158DRAFT_0596 at 602.647 kb on - strand, within B158DRAFT_0596 at 602.699 kb on - strand, within B158DRAFT_0596 at 602.739 kb on - strand, within B158DRAFT_0596 at 602.765 kb on + strand, within B158DRAFT_0596 at 602.786 kb on + strand, within B158DRAFT_0596 at 602.794 kb on - strand, within B158DRAFT_0596 at 602.794 kb on - strand, within B158DRAFT_0596 at 602.804 kb on + strand, within B158DRAFT_0596 at 602.879 kb on - strand, within B158DRAFT_0596 at 602.879 kb on - strand, within B158DRAFT_0596 at 602.980 kb on + strand at 603.013 kb on - strand, within B158DRAFT_0597 at 603.042 kb on + strand, within B158DRAFT_0597 at 603.235 kb on + strand at 603.253 kb on - strand at 603.432 kb on - strand, within B158DRAFT_0598 at 603.697 kb on + strand at 603.718 kb on + strand, within B158DRAFT_0599 at 603.726 kb on - strand, within B158DRAFT_0599 at 603.745 kb on + strand, within B158DRAFT_0599 at 603.764 kb on - strand, within B158DRAFT_0599 at 603.769 kb on - strand, within B158DRAFT_0599 at 603.786 kb on + strand, within B158DRAFT_0599 at 603.866 kb on - strand, within B158DRAFT_0599 at 603.877 kb on + strand, within B158DRAFT_0599 at 603.878 kb on + strand, within B158DRAFT_0599 at 603.886 kb on - strand, within B158DRAFT_0599 at 604.047 kb on - strand at 604.047 kb on - strand at 604.113 kb on + strand at 604.121 kb on - strand at 604.127 kb on - strand at 604.143 kb on + strand at 604.143 kb on - strand at 604.190 kb on + strand at 604.191 kb on + strand at 604.211 kb on - strand at 604.361 kb on + strand at 604.369 kb on - strand at 604.369 kb on - strand at 604.500 kb on - strand, within B158DRAFT_0600
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM remove 602,248 + -0.7 602,364 + -0.3 602,364 + -0.3 602,365 + -1.1 602,373 - +1.8 602,382 + -0.5 602,384 + +0.3 602,407 + B158DRAFT_0596 0.13 -0.6 602,415 - B158DRAFT_0596 0.14 -0.3 602,415 - B158DRAFT_0596 0.14 -0.2 602,419 + B158DRAFT_0596 0.15 -0.6 602,451 - B158DRAFT_0596 0.20 -0.4 602,499 + B158DRAFT_0596 0.27 -0.3 602,499 + B158DRAFT_0596 0.27 -1.7 602,501 + B158DRAFT_0596 0.28 -0.0 602,507 - B158DRAFT_0596 0.29 -0.6 602,532 + B158DRAFT_0596 0.32 -0.3 602,542 + B158DRAFT_0596 0.34 -0.2 602,552 - B158DRAFT_0596 0.35 +0.1 602,639 + B158DRAFT_0596 0.49 -0.5 602,639 + B158DRAFT_0596 0.49 +0.2 602,639 + B158DRAFT_0596 0.49 -1.4 602,639 + B158DRAFT_0596 0.49 +0.1 602,647 - B158DRAFT_0596 0.50 -0.6 602,699 - B158DRAFT_0596 0.58 -0.3 602,739 - B158DRAFT_0596 0.64 -2.2 602,765 + B158DRAFT_0596 0.68 -1.4 602,786 + B158DRAFT_0596 0.71 -1.3 602,794 - B158DRAFT_0596 0.73 -0.2 602,794 - B158DRAFT_0596 0.73 -0.7 602,804 + B158DRAFT_0596 0.74 +0.7 602,879 - B158DRAFT_0596 0.86 -0.4 602,879 - B158DRAFT_0596 0.86 -2.1 602,980 + -0.4 603,013 - B158DRAFT_0597 0.20 -0.9 603,042 + B158DRAFT_0597 0.32 +0.8 603,235 + -0.7 603,253 - -0.4 603,432 - B158DRAFT_0598 0.64 +2.6 603,697 + +3.6 603,718 + B158DRAFT_0599 0.12 +3.2 603,726 - B158DRAFT_0599 0.14 +1.5 603,745 + B158DRAFT_0599 0.19 +2.9 603,764 - B158DRAFT_0599 0.24 +3.4 603,769 - B158DRAFT_0599 0.25 +3.2 603,786 + B158DRAFT_0599 0.29 +1.5 603,866 - B158DRAFT_0599 0.49 +2.7 603,877 + B158DRAFT_0599 0.52 +3.4 603,878 + B158DRAFT_0599 0.52 +2.9 603,886 - B158DRAFT_0599 0.54 +3.0 604,047 - +3.6 604,047 - +3.9 604,113 + -1.4 604,121 - -1.5 604,127 - -1.3 604,143 + -1.2 604,143 - +1.0 604,190 + +0.3 604,191 + +0.3 604,211 - +0.8 604,361 + -0.2 604,369 - +0.2 604,369 - -0.1 604,500 - B158DRAFT_0600 0.14 -0.3
Or see this region's nucleotide sequence