Experiment: m.b. Cholin acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0498 and B158DRAFT_0499 are separated by 103 nucleotides B158DRAFT_0499 and B158DRAFT_0500 are separated by 510 nucleotides
B158DRAFT_0498: B158DRAFT_0498 - Succinylglutamate desuccinylase, at 498,747 to 499,640
_0498
B158DRAFT_0499: B158DRAFT_0499 - DNA polymerase I (EC 2.7.7.7), at 499,744 to 502,482
_0499
B158DRAFT_0500: B158DRAFT_0500 - hypothetical protein, at 502,993 to 505,212
_0500
Position (kb) 499
500
501
502
503 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4 at 498.823 kb on + strand at 498.877 kb on - strand, within B158DRAFT_0498 at 498.878 kb on - strand, within B158DRAFT_0498 at 498.958 kb on + strand, within B158DRAFT_0498 at 498.958 kb on + strand, within B158DRAFT_0498 at 498.996 kb on + strand, within B158DRAFT_0498 at 499.077 kb on - strand, within B158DRAFT_0498 at 499.077 kb on - strand, within B158DRAFT_0498 at 499.082 kb on - strand, within B158DRAFT_0498 at 499.092 kb on - strand, within B158DRAFT_0498 at 499.110 kb on - strand, within B158DRAFT_0498 at 499.177 kb on + strand, within B158DRAFT_0498 at 499.261 kb on - strand, within B158DRAFT_0498 at 499.331 kb on + strand, within B158DRAFT_0498 at 499.331 kb on + strand, within B158DRAFT_0498 at 499.342 kb on + strand, within B158DRAFT_0498 at 499.350 kb on + strand, within B158DRAFT_0498 at 499.350 kb on - strand, within B158DRAFT_0498 at 499.355 kb on - strand, within B158DRAFT_0498 at 499.355 kb on - strand, within B158DRAFT_0498 at 499.522 kb on - strand, within B158DRAFT_0498 at 499.522 kb on - strand, within B158DRAFT_0498 at 499.522 kb on - strand, within B158DRAFT_0498 at 499.542 kb on + strand, within B158DRAFT_0498 at 499.555 kb on + strand at 499.555 kb on + strand at 499.658 kb on + strand at 500.591 kb on + strand, within B158DRAFT_0499 at 500.659 kb on + strand, within B158DRAFT_0499 at 500.881 kb on - strand, within B158DRAFT_0499 at 500.988 kb on + strand, within B158DRAFT_0499 at 501.236 kb on + strand, within B158DRAFT_0499 at 501.475 kb on + strand, within B158DRAFT_0499 at 501.702 kb on + strand, within B158DRAFT_0499 at 502.054 kb on + strand, within B158DRAFT_0499 at 502.240 kb on + strand at 502.253 kb on - strand at 502.381 kb on + strand at 502.572 kb on + strand at 502.582 kb on + strand at 502.590 kb on - strand at 502.643 kb on + strand at 502.644 kb on - strand at 502.650 kb on + strand at 502.650 kb on + strand at 502.655 kb on + strand at 502.658 kb on - strand at 502.658 kb on - strand at 502.658 kb on - strand at 502.673 kb on - strand at 502.678 kb on + strand at 502.686 kb on - strand at 502.686 kb on - strand at 502.711 kb on - strand at 502.728 kb on - strand at 502.728 kb on - strand at 502.758 kb on - strand at 502.764 kb on + strand at 502.861 kb on - strand at 503.006 kb on + strand at 503.006 kb on + strand at 503.006 kb on + strand at 503.013 kb on + strand at 503.051 kb on + strand at 503.051 kb on + strand at 503.052 kb on + strand at 503.091 kb on - strand at 503.121 kb on - strand at 503.136 kb on - strand at 503.192 kb on + strand at 503.207 kb on + strand at 503.217 kb on + strand, within B158DRAFT_0500 at 503.353 kb on - strand, within B158DRAFT_0500 at 503.373 kb on - strand, within B158DRAFT_0500 at 503.446 kb on + strand, within B158DRAFT_0500 at 503.452 kb on - strand, within B158DRAFT_0500 at 503.452 kb on - strand, within B158DRAFT_0500 at 503.454 kb on + strand, within B158DRAFT_0500 at 503.464 kb on + strand, within B158DRAFT_0500 at 503.472 kb on - strand, within B158DRAFT_0500
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM remove 498,823 + -1.6 498,877 - B158DRAFT_0498 0.15 -0.9 498,878 - B158DRAFT_0498 0.15 -0.2 498,958 + B158DRAFT_0498 0.24 +1.6 498,958 + B158DRAFT_0498 0.24 +0.9 498,996 + B158DRAFT_0498 0.28 -0.1 499,077 - B158DRAFT_0498 0.37 -1.1 499,077 - B158DRAFT_0498 0.37 -1.0 499,082 - B158DRAFT_0498 0.37 -0.5 499,092 - B158DRAFT_0498 0.39 +1.0 499,110 - B158DRAFT_0498 0.41 -0.3 499,177 + B158DRAFT_0498 0.48 -0.1 499,261 - B158DRAFT_0498 0.57 +1.5 499,331 + B158DRAFT_0498 0.65 -0.5 499,331 + B158DRAFT_0498 0.65 +0.1 499,342 + B158DRAFT_0498 0.67 -0.1 499,350 + B158DRAFT_0498 0.67 +0.7 499,350 - B158DRAFT_0498 0.67 +0.0 499,355 - B158DRAFT_0498 0.68 +0.6 499,355 - B158DRAFT_0498 0.68 +1.0 499,522 - B158DRAFT_0498 0.87 -0.1 499,522 - B158DRAFT_0498 0.87 +0.0 499,522 - B158DRAFT_0498 0.87 +1.4 499,542 + B158DRAFT_0498 0.89 -0.9 499,555 + -0.6 499,555 + -0.1 499,658 + +0.9 500,591 + B158DRAFT_0499 0.31 -0.2 500,659 + B158DRAFT_0499 0.33 +1.2 500,881 - B158DRAFT_0499 0.42 +4.7 500,988 + B158DRAFT_0499 0.45 +1.1 501,236 + B158DRAFT_0499 0.54 +4.7 501,475 + B158DRAFT_0499 0.63 +1.0 501,702 + B158DRAFT_0499 0.71 +3.1 502,054 + B158DRAFT_0499 0.84 +0.8 502,240 + +3.7 502,253 - +1.8 502,381 + +3.7 502,572 + -0.0 502,582 + +0.9 502,590 - -0.9 502,643 + +0.4 502,644 - -3.4 502,650 + +0.0 502,650 + -0.3 502,655 + -0.7 502,658 - -0.4 502,658 - +0.4 502,658 - +0.9 502,673 - -0.6 502,678 + -1.9 502,686 - -1.0 502,686 - -0.7 502,711 - +0.1 502,728 - -0.5 502,728 - -0.5 502,758 - -0.8 502,764 + -0.2 502,861 - -0.8 503,006 + -0.6 503,006 + -0.7 503,006 + -1.6 503,013 + -0.9 503,051 + -1.9 503,051 + +0.5 503,052 + -0.1 503,091 - -1.8 503,121 - -1.7 503,136 - +1.0 503,192 + -1.2 503,207 + -1.4 503,217 + B158DRAFT_0500 0.10 -1.4 503,353 - B158DRAFT_0500 0.16 -0.8 503,373 - B158DRAFT_0500 0.17 -0.4 503,446 + B158DRAFT_0500 0.20 -1.7 503,452 - B158DRAFT_0500 0.21 -2.6 503,452 - B158DRAFT_0500 0.21 -0.4 503,454 + B158DRAFT_0500 0.21 -1.6 503,464 + B158DRAFT_0500 0.21 +0.3 503,472 - B158DRAFT_0500 0.22 -0.8
Or see this region's nucleotide sequence