Experiment: m.b. Cholin acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0480 and B158DRAFT_0481 are separated by 15 nucleotides B158DRAFT_0481 and B158DRAFT_0482 are separated by 104 nucleotides B158DRAFT_0482 and B158DRAFT_0483 are separated by 252 nucleotides B158DRAFT_0483 and B158DRAFT_0484 are separated by 34 nucleotides
B158DRAFT_0480: B158DRAFT_0480 - hypothetical protein, at 483,304 to 483,552
_0480
B158DRAFT_0481: B158DRAFT_0481 - SseB protein., at 483,568 to 484,395
_0481
B158DRAFT_0482: B158DRAFT_0482 - hypothetical protein, at 484,500 to 485,147
_0482
B158DRAFT_0483: B158DRAFT_0483 - hypothetical protein, at 485,400 to 485,768
_0483
B158DRAFT_0484: B158DRAFT_0484 - Protein of unknown function (DUF3478)., at 485,803 to 486,171
_0484
Position (kb) 484
485
486 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 483.540 kb on + strand at 483.550 kb on - strand at 483.550 kb on - strand at 483.556 kb on - strand at 483.556 kb on - strand at 483.557 kb on - strand at 483.617 kb on - strand at 483.634 kb on + strand at 483.634 kb on + strand at 483.634 kb on + strand at 483.634 kb on + strand at 483.635 kb on + strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.642 kb on - strand at 483.643 kb on - strand at 483.666 kb on - strand, within B158DRAFT_0481 at 483.802 kb on + strand, within B158DRAFT_0481 at 483.802 kb on - strand, within B158DRAFT_0481 at 483.843 kb on + strand, within B158DRAFT_0481 at 483.843 kb on + strand, within B158DRAFT_0481 at 483.843 kb on + strand, within B158DRAFT_0481 at 483.851 kb on - strand, within B158DRAFT_0481 at 483.851 kb on - strand, within B158DRAFT_0481 at 483.851 kb on - strand, within B158DRAFT_0481 at 483.859 kb on - strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.035 kb on + strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.043 kb on - strand, within B158DRAFT_0481 at 484.107 kb on + strand, within B158DRAFT_0481 at 484.107 kb on + strand, within B158DRAFT_0481 at 484.115 kb on - strand, within B158DRAFT_0481 at 484.115 kb on - strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.173 kb on + strand, within B158DRAFT_0481 at 484.181 kb on - strand, within B158DRAFT_0481 at 484.181 kb on - strand, within B158DRAFT_0481 at 484.202 kb on - strand, within B158DRAFT_0481 at 484.226 kb on + strand, within B158DRAFT_0481 at 484.226 kb on + strand, within B158DRAFT_0481 at 484.226 kb on + strand, within B158DRAFT_0481 at 484.234 kb on - strand, within B158DRAFT_0481 at 484.236 kb on + strand, within B158DRAFT_0481 at 484.371 kb on + strand at 484.467 kb on - strand at 484.630 kb on + strand, within B158DRAFT_0482 at 484.630 kb on - strand, within B158DRAFT_0482 at 484.682 kb on - strand, within B158DRAFT_0482 at 484.746 kb on + strand, within B158DRAFT_0482 at 484.825 kb on + strand, within B158DRAFT_0482 at 484.902 kb on + strand, within B158DRAFT_0482 at 485.012 kb on - strand, within B158DRAFT_0482 at 485.013 kb on - strand, within B158DRAFT_0482 at 485.038 kb on - strand, within B158DRAFT_0482 at 485.134 kb on + strand at 485.217 kb on + strand at 485.305 kb on - strand at 485.394 kb on + strand at 485.495 kb on - strand, within B158DRAFT_0483 at 485.526 kb on - strand, within B158DRAFT_0483 at 485.533 kb on + strand, within B158DRAFT_0483 at 485.536 kb on - strand, within B158DRAFT_0483 at 485.572 kb on - strand, within B158DRAFT_0483 at 485.599 kb on - strand, within B158DRAFT_0483 at 485.693 kb on - strand, within B158DRAFT_0483 at 485.801 kb on - strand at 486.018 kb on + strand, within B158DRAFT_0484 at 486.018 kb on + strand, within B158DRAFT_0484 at 486.018 kb on + strand, within B158DRAFT_0484 at 486.026 kb on - strand, within B158DRAFT_0484
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM remove 483,540 + -0.3 483,550 - -0.3 483,550 - -0.1 483,556 - +0.9 483,556 - -0.7 483,557 - -0.6 483,617 - +0.6 483,634 + -0.7 483,634 + +1.0 483,634 + +0.9 483,634 + +0.5 483,635 + -0.5 483,642 - -1.3 483,642 - -1.2 483,642 - -0.3 483,642 - +0.3 483,642 - +0.5 483,642 - -0.5 483,642 - +0.1 483,642 - -1.4 483,643 - +0.8 483,666 - B158DRAFT_0481 0.12 -0.2 483,802 + B158DRAFT_0481 0.28 -0.1 483,802 - B158DRAFT_0481 0.28 -1.9 483,843 + B158DRAFT_0481 0.33 -1.1 483,843 + B158DRAFT_0481 0.33 +0.0 483,843 + B158DRAFT_0481 0.33 +0.5 483,851 - B158DRAFT_0481 0.34 -0.9 483,851 - B158DRAFT_0481 0.34 -0.7 483,851 - B158DRAFT_0481 0.34 -0.3 483,859 - B158DRAFT_0481 0.35 -3.1 484,035 + B158DRAFT_0481 0.56 +1.8 484,035 + B158DRAFT_0481 0.56 +2.0 484,035 + B158DRAFT_0481 0.56 -0.2 484,035 + B158DRAFT_0481 0.56 +0.6 484,035 + B158DRAFT_0481 0.56 +1.1 484,043 - B158DRAFT_0481 0.57 +0.2 484,043 - B158DRAFT_0481 0.57 -1.4 484,043 - B158DRAFT_0481 0.57 +0.2 484,043 - B158DRAFT_0481 0.57 +1.5 484,043 - B158DRAFT_0481 0.57 -1.2 484,043 - B158DRAFT_0481 0.57 -1.6 484,107 + B158DRAFT_0481 0.65 -0.3 484,107 + B158DRAFT_0481 0.65 +0.3 484,115 - B158DRAFT_0481 0.66 -0.5 484,115 - B158DRAFT_0481 0.66 -1.3 484,173 + B158DRAFT_0481 0.73 +0.7 484,173 + B158DRAFT_0481 0.73 -0.1 484,173 + B158DRAFT_0481 0.73 -1.1 484,173 + B158DRAFT_0481 0.73 -1.0 484,173 + B158DRAFT_0481 0.73 -0.3 484,181 - B158DRAFT_0481 0.74 -0.2 484,181 - B158DRAFT_0481 0.74 -0.2 484,202 - B158DRAFT_0481 0.77 -0.6 484,226 + B158DRAFT_0481 0.79 -1.3 484,226 + B158DRAFT_0481 0.79 -0.5 484,226 + B158DRAFT_0481 0.79 -0.1 484,234 - B158DRAFT_0481 0.80 -0.7 484,236 + B158DRAFT_0481 0.81 -0.4 484,371 + -0.7 484,467 - -0.6 484,630 + B158DRAFT_0482 0.20 -1.8 484,630 - B158DRAFT_0482 0.20 -0.6 484,682 - B158DRAFT_0482 0.28 -0.7 484,746 + B158DRAFT_0482 0.38 -1.5 484,825 + B158DRAFT_0482 0.50 -0.3 484,902 + B158DRAFT_0482 0.62 -0.5 485,012 - B158DRAFT_0482 0.79 +0.5 485,013 - B158DRAFT_0482 0.79 -2.6 485,038 - B158DRAFT_0482 0.83 -2.2 485,134 + -0.1 485,217 + -1.2 485,305 - +0.5 485,394 + -1.5 485,495 - B158DRAFT_0483 0.26 -1.2 485,526 - B158DRAFT_0483 0.34 +0.1 485,533 + B158DRAFT_0483 0.36 -0.5 485,536 - B158DRAFT_0483 0.37 -0.1 485,572 - B158DRAFT_0483 0.47 -0.3 485,599 - B158DRAFT_0483 0.54 -1.0 485,693 - B158DRAFT_0483 0.79 -1.1 485,801 - -0.8 486,018 + B158DRAFT_0484 0.58 -1.9 486,018 + B158DRAFT_0484 0.58 +0.9 486,018 + B158DRAFT_0484 0.58 -0.6 486,026 - B158DRAFT_0484 0.60 +0.2
Or see this region's nucleotide sequence