Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0168

Experiment: m.b. Cholin acetate 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0167 and B158DRAFT_0168 are separated by 92 nucleotidesB158DRAFT_0168 and B158DRAFT_0169 are separated by 63 nucleotidesB158DRAFT_0169 and B158DRAFT_0170 are separated by 11 nucleotidesB158DRAFT_0170 and B158DRAFT_0171 are separated by 25 nucleotides B158DRAFT_0167: B158DRAFT_0167 - phosphoribosylamine--glycine ligase (EC 6.3.4.13), at 164,184 to 165,467 _0167 B158DRAFT_0168: B158DRAFT_0168 - Dicarboxylate transport., at 165,560 to 168,199 _0168 B158DRAFT_0169: B158DRAFT_0169 - hypothetical protein, at 168,263 to 168,457 _0169 B158DRAFT_0170: B158DRAFT_0170 - Uncharacterized protein conserved in bacteria, at 168,469 to 168,801 _0170 B158DRAFT_0171: B158DRAFT_0171 - Glutathione S-transferase, at 168,827 to 169,423 _0171 Position (kb) 165 166 167 168 169Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3 4 5at 165.439 kb on + strandat 165.470 kb on - strandat 165.496 kb on + strandat 165.496 kb on + strandat 165.496 kb on + strandat 165.504 kb on - strandat 165.509 kb on - strandat 165.552 kb on + strandat 165.552 kb on + strandat 165.587 kb on + strandat 165.587 kb on + strandat 165.595 kb on - strandat 165.595 kb on - strandat 165.595 kb on - strandat 165.602 kb on + strandat 165.602 kb on + strandat 165.608 kb on - strandat 165.642 kb on - strandat 165.643 kb on + strandat 165.645 kb on + strandat 165.770 kb on + strandat 165.770 kb on + strandat 165.770 kb on + strandat 165.770 kb on + strandat 165.770 kb on + strandat 165.770 kb on + strandat 165.778 kb on - strandat 165.778 kb on - strandat 165.778 kb on - strandat 165.805 kb on + strandat 165.805 kb on + strandat 165.813 kb on - strandat 165.813 kb on - strandat 165.813 kb on - strandat 165.813 kb on - strandat 165.813 kb on - strandat 165.918 kb on + strand, within B158DRAFT_0168at 165.962 kb on - strand, within B158DRAFT_0168at 165.986 kb on + strand, within B158DRAFT_0168at 165.986 kb on + strand, within B158DRAFT_0168at 165.986 kb on + strand, within B158DRAFT_0168at 165.991 kb on + strand, within B158DRAFT_0168at 165.991 kb on + strand, within B158DRAFT_0168at 165.994 kb on - strand, within B158DRAFT_0168at 165.994 kb on - strand, within B158DRAFT_0168at 165.999 kb on - strand, within B158DRAFT_0168at 165.999 kb on - strand, within B158DRAFT_0168at 165.999 kb on - strand, within B158DRAFT_0168at 166.015 kb on + strand, within B158DRAFT_0168at 166.015 kb on + strand, within B158DRAFT_0168at 166.023 kb on - strand, within B158DRAFT_0168at 166.031 kb on - strand, within B158DRAFT_0168at 166.089 kb on - strand, within B158DRAFT_0168at 166.117 kb on - strand, within B158DRAFT_0168at 166.284 kb on + strand, within B158DRAFT_0168at 166.319 kb on + strand, within B158DRAFT_0168at 166.374 kb on + strand, within B158DRAFT_0168at 166.384 kb on + strand, within B158DRAFT_0168at 166.395 kb on - strand, within B158DRAFT_0168at 166.413 kb on + strand, within B158DRAFT_0168at 166.413 kb on + strand, within B158DRAFT_0168at 166.414 kb on - strand, within B158DRAFT_0168at 166.420 kb on - strand, within B158DRAFT_0168at 166.489 kb on + strand, within B158DRAFT_0168at 166.573 kb on + strand, within B158DRAFT_0168at 166.614 kb on + strand, within B158DRAFT_0168at 166.622 kb on - strand, within B158DRAFT_0168at 166.624 kb on - strand, within B158DRAFT_0168at 166.672 kb on + strand, within B158DRAFT_0168at 166.682 kb on + strand, within B158DRAFT_0168at 166.682 kb on + strand, within B158DRAFT_0168at 166.682 kb on + strand, within B158DRAFT_0168at 166.682 kb on + strand, within B158DRAFT_0168at 166.682 kb on + strand, within B158DRAFT_0168at 166.682 kb on + strand, within B158DRAFT_0168at 166.682 kb on + strand, within B158DRAFT_0168at 166.690 kb on - strand, within B158DRAFT_0168at 166.690 kb on - strand, within B158DRAFT_0168at 166.690 kb on - strand, within B158DRAFT_0168at 166.755 kb on - strand, within B158DRAFT_0168at 166.829 kb on + strand, within B158DRAFT_0168at 167.030 kb on + strand, within B158DRAFT_0168at 167.038 kb on + strand, within B158DRAFT_0168at 167.038 kb on - strand, within B158DRAFT_0168at 167.093 kb on + strand, within B158DRAFT_0168at 167.093 kb on + strand, within B158DRAFT_0168at 167.109 kb on + strand, within B158DRAFT_0168at 167.258 kb on - strand, within B158DRAFT_0168at 167.268 kb on + strand, within B158DRAFT_0168at 167.268 kb on + strand, within B158DRAFT_0168at 167.276 kb on - strand, within B158DRAFT_0168at 167.276 kb on - strand, within B158DRAFT_0168at 167.276 kb on - strand, within B158DRAFT_0168at 167.362 kb on - strand, within B158DRAFT_0168at 167.390 kb on + strand, within B158DRAFT_0168at 167.507 kb on + strand, within B158DRAFT_0168at 167.518 kb on + strand, within B158DRAFT_0168at 167.531 kb on - strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.586 kb on + strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.594 kb on - strand, within B158DRAFT_0168at 167.626 kb on + strand, within B158DRAFT_0168at 167.634 kb on - strand, within B158DRAFT_0168at 167.688 kb on + strand, within B158DRAFT_0168at 167.727 kb on - strand, within B158DRAFT_0168at 167.745 kb on + strand, within B158DRAFT_0168at 167.796 kb on + strand, within B158DRAFT_0168at 168.029 kb on + strandat 168.029 kb on - strandat 168.238 kb on + strandat 168.284 kb on + strand, within B158DRAFT_0169at 168.307 kb on + strand, within B158DRAFT_0169at 168.330 kb on - strand, within B158DRAFT_0169at 168.421 kb on + strand, within B158DRAFT_0169at 168.454 kb on - strandat 168.531 kb on - strand, within B158DRAFT_0170at 168.535 kb on + strand, within B158DRAFT_0170at 168.545 kb on + strand, within B158DRAFT_0170at 168.553 kb on - strand, within B158DRAFT_0170at 168.561 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.567 kb on - strand, within B158DRAFT_0170at 168.573 kb on - strand, within B158DRAFT_0170at 168.640 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.735 kb on + strand, within B158DRAFT_0170at 168.743 kb on - strand, within B158DRAFT_0170at 168.839 kb on - strandat 168.934 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.944 kb on + strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.952 kb on - strand, within B158DRAFT_0171at 168.975 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 168.997 kb on + strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.005 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.083 kb on - strand, within B158DRAFT_0171at 169.113 kb on + strand, within B158DRAFT_0171at 169.114 kb on - strand, within B158DRAFT_0171at 169.141 kb on + strand, within B158DRAFT_0171

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM
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165,439 + +1.0
165,470 - -0.3
165,496 + -1.4
165,496 + +0.4
165,496 + +0.1
165,504 - -0.5
165,509 - -0.8
165,552 + -1.5
165,552 + -2.8
165,587 + -0.8
165,587 + -0.8
165,595 - -0.5
165,595 - -1.3
165,595 - +0.3
165,602 + +1.0
165,602 + -0.8
165,608 - -1.4
165,642 - -2.0
165,643 + +0.4
165,645 + -0.3
165,770 + +0.0
165,770 + -1.3
165,770 + -0.1
165,770 + -1.3
165,770 + -2.2
165,770 + -2.0
165,778 - -0.2
165,778 - +0.7
165,778 - +1.0
165,805 + +2.1
165,805 + +1.0
165,813 - -0.8
165,813 - -0.9
165,813 - -0.5
165,813 - +0.4
165,813 - -0.1
165,918 + B158DRAFT_0168 0.14 -0.4
165,962 - B158DRAFT_0168 0.15 -1.2
165,986 + B158DRAFT_0168 0.16 -0.4
165,986 + B158DRAFT_0168 0.16 -1.7
165,986 + B158DRAFT_0168 0.16 -0.1
165,991 + B158DRAFT_0168 0.16 +0.4
165,991 + B158DRAFT_0168 0.16 +1.8
165,994 - B158DRAFT_0168 0.16 -0.1
165,994 - B158DRAFT_0168 0.16 -0.7
165,999 - B158DRAFT_0168 0.17 -2.0
165,999 - B158DRAFT_0168 0.17 -1.0
165,999 - B158DRAFT_0168 0.17 -0.6
166,015 + B158DRAFT_0168 0.17 -0.1
166,015 + B158DRAFT_0168 0.17 -2.3
166,023 - B158DRAFT_0168 0.18 +0.7
166,031 - B158DRAFT_0168 0.18 +0.6
166,089 - B158DRAFT_0168 0.20 +0.3
166,117 - B158DRAFT_0168 0.21 -0.2
166,284 + B158DRAFT_0168 0.27 -2.7
166,319 + B158DRAFT_0168 0.29 +1.1
166,374 + B158DRAFT_0168 0.31 -2.2
166,384 + B158DRAFT_0168 0.31 -0.1
166,395 - B158DRAFT_0168 0.32 -1.8
166,413 + B158DRAFT_0168 0.32 -1.1
166,413 + B158DRAFT_0168 0.32 +4.0
166,414 - B158DRAFT_0168 0.32 +1.6
166,420 - B158DRAFT_0168 0.33 -0.2
166,489 + B158DRAFT_0168 0.35 +0.2
166,573 + B158DRAFT_0168 0.38 -1.3
166,614 + B158DRAFT_0168 0.40 -0.0
166,622 - B158DRAFT_0168 0.40 -1.3
166,624 - B158DRAFT_0168 0.40 -1.7
166,672 + B158DRAFT_0168 0.42 -1.1
166,682 + B158DRAFT_0168 0.42 -1.6
166,682 + B158DRAFT_0168 0.42 -0.9
166,682 + B158DRAFT_0168 0.42 -0.6
166,682 + B158DRAFT_0168 0.42 -0.0
166,682 + B158DRAFT_0168 0.42 -1.2
166,682 + B158DRAFT_0168 0.42 +0.2
166,682 + B158DRAFT_0168 0.42 -0.2
166,690 - B158DRAFT_0168 0.43 +1.1
166,690 - B158DRAFT_0168 0.43 +0.9
166,690 - B158DRAFT_0168 0.43 -1.0
166,755 - B158DRAFT_0168 0.45 -0.7
166,829 + B158DRAFT_0168 0.48 +0.4
167,030 + B158DRAFT_0168 0.56 -0.3
167,038 + B158DRAFT_0168 0.56 +5.3
167,038 - B158DRAFT_0168 0.56 +0.3
167,093 + B158DRAFT_0168 0.58 -0.3
167,093 + B158DRAFT_0168 0.58 +0.7
167,109 + B158DRAFT_0168 0.59 +0.5
167,258 - B158DRAFT_0168 0.64 -1.6
167,268 + B158DRAFT_0168 0.65 -0.4
167,268 + B158DRAFT_0168 0.65 +0.3
167,276 - B158DRAFT_0168 0.65 +0.7
167,276 - B158DRAFT_0168 0.65 -0.5
167,276 - B158DRAFT_0168 0.65 -1.8
167,362 - B158DRAFT_0168 0.68 -0.5
167,390 + B158DRAFT_0168 0.69 -1.0
167,507 + B158DRAFT_0168 0.74 +0.8
167,518 + B158DRAFT_0168 0.74 +0.9
167,531 - B158DRAFT_0168 0.75 +1.7
167,586 + B158DRAFT_0168 0.77 -1.3
167,586 + B158DRAFT_0168 0.77 +0.1
167,586 + B158DRAFT_0168 0.77 +1.7
167,586 + B158DRAFT_0168 0.77 -0.6
167,594 - B158DRAFT_0168 0.77 +2.3
167,594 - B158DRAFT_0168 0.77 +0.4
167,594 - B158DRAFT_0168 0.77 -0.6
167,594 - B158DRAFT_0168 0.77 -2.2
167,594 - B158DRAFT_0168 0.77 +2.3
167,594 - B158DRAFT_0168 0.77 -0.4
167,626 + B158DRAFT_0168 0.78 -0.6
167,634 - B158DRAFT_0168 0.79 -0.5
167,688 + B158DRAFT_0168 0.81 -0.2
167,727 - B158DRAFT_0168 0.82 -0.3
167,745 + B158DRAFT_0168 0.83 +0.2
167,796 + B158DRAFT_0168 0.85 -0.8
168,029 + -0.6
168,029 - -0.8
168,238 + +0.1
168,284 + B158DRAFT_0169 0.11 +0.0
168,307 + B158DRAFT_0169 0.23 +0.1
168,330 - B158DRAFT_0169 0.34 -0.6
168,421 + B158DRAFT_0169 0.81 -0.5
168,454 - -0.8
168,531 - B158DRAFT_0170 0.19 -0.8
168,535 + B158DRAFT_0170 0.20 -0.4
168,545 + B158DRAFT_0170 0.23 +0.2
168,553 - B158DRAFT_0170 0.25 +3.4
168,561 - B158DRAFT_0170 0.28 -0.3
168,567 - B158DRAFT_0170 0.29 +0.2
168,567 - B158DRAFT_0170 0.29 -0.0
168,573 - B158DRAFT_0170 0.31 +1.8
168,640 + B158DRAFT_0170 0.51 +1.2
168,735 + B158DRAFT_0170 0.80 +0.3
168,735 + B158DRAFT_0170 0.80 -0.6
168,743 - B158DRAFT_0170 0.82 +0.3
168,839 - -0.3
168,934 + B158DRAFT_0171 0.18 -0.8
168,944 + B158DRAFT_0171 0.20 +0.4
168,944 + B158DRAFT_0171 0.20 -0.7
168,944 + B158DRAFT_0171 0.20 -0.2
168,944 + B158DRAFT_0171 0.20 -1.4
168,944 + B158DRAFT_0171 0.20 +1.8
168,944 + B158DRAFT_0171 0.20 -0.9
168,952 - B158DRAFT_0171 0.21 -1.9
168,952 - B158DRAFT_0171 0.21 +0.4
168,952 - B158DRAFT_0171 0.21 +0.3
168,952 - B158DRAFT_0171 0.21 -1.6
168,952 - B158DRAFT_0171 0.21 -0.1
168,975 + B158DRAFT_0171 0.25 -1.4
168,997 + B158DRAFT_0171 0.28 -0.3
168,997 + B158DRAFT_0171 0.28 -0.7
168,997 + B158DRAFT_0171 0.28 -0.4
168,997 + B158DRAFT_0171 0.28 +2.8
169,005 - B158DRAFT_0171 0.30 +1.2
169,005 - B158DRAFT_0171 0.30 +1.8
169,083 - B158DRAFT_0171 0.43 -0.6
169,083 - B158DRAFT_0171 0.43 +0.8
169,083 - B158DRAFT_0171 0.43 -1.9
169,113 + B158DRAFT_0171 0.48 -0.5
169,114 - B158DRAFT_0171 0.48 -0.3
169,141 + B158DRAFT_0171 0.53 -1.0

Or see this region's nucleotide sequence