Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0136

Experiment: m.b. Cholin acetate 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0134 and B158DRAFT_0135 are separated by 35 nucleotidesB158DRAFT_0135 and B158DRAFT_0136 are separated by 27 nucleotidesB158DRAFT_0136 and B158DRAFT_0137 are separated by 2 nucleotides B158DRAFT_0134: B158DRAFT_0134 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 132,008 to 132,880 _0134 B158DRAFT_0135: B158DRAFT_0135 - Cytochrome oxidase assembly factor, at 132,916 to 133,485 _0135 B158DRAFT_0136: B158DRAFT_0136 - cytochrome c oxidase, subunit I, at 133,513 to 135,072 _0136 B158DRAFT_0137: B158DRAFT_0137 - cytochrome c oxidase, subunit II, at 135,075 to 136,244 _0137 Position (kb) 133 134 135 136Strain fitness (log2 ratio) -1 0 1 2 3 4 5 6 7 8 9at 132.644 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.656 kb on + strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.664 kb on - strand, within B158DRAFT_0134at 132.758 kb on + strand, within B158DRAFT_0134at 132.766 kb on - strand, within B158DRAFT_0134at 132.767 kb on + strand, within B158DRAFT_0134at 132.767 kb on + strand, within B158DRAFT_0134at 132.886 kb on - strandat 132.890 kb on + strandat 132.898 kb on - strandat 132.908 kb on - strandat 132.908 kb on - strandat 132.908 kb on - strandat 132.908 kb on - strandat 132.913 kb on + strandat 132.965 kb on + strandat 132.965 kb on + strandat 132.965 kb on + strandat 132.965 kb on + strandat 132.973 kb on - strand, within B158DRAFT_0135at 132.973 kb on - strand, within B158DRAFT_0135at 132.973 kb on - strand, within B158DRAFT_0135at 133.011 kb on - strand, within B158DRAFT_0135at 133.011 kb on - strand, within B158DRAFT_0135at 133.073 kb on - strand, within B158DRAFT_0135at 133.147 kb on + strand, within B158DRAFT_0135at 133.155 kb on - strand, within B158DRAFT_0135at 133.199 kb on + strand, within B158DRAFT_0135at 133.205 kb on + strand, within B158DRAFT_0135at 133.206 kb on + strand, within B158DRAFT_0135at 133.207 kb on - strand, within B158DRAFT_0135at 133.317 kb on + strand, within B158DRAFT_0135at 133.317 kb on + strand, within B158DRAFT_0135at 133.325 kb on - strand, within B158DRAFT_0135at 133.410 kb on + strand, within B158DRAFT_0135at 133.440 kb on - strandat 133.483 kb on - strandat 133.506 kb on + strandat 133.575 kb on + strandat 133.583 kb on - strandat 133.584 kb on + strandat 133.640 kb on + strandat 133.669 kb on - strand, within B158DRAFT_0136at 133.669 kb on - strand, within B158DRAFT_0136at 133.680 kb on - strand, within B158DRAFT_0136at 133.692 kb on + strand, within B158DRAFT_0136at 133.700 kb on - strand, within B158DRAFT_0136at 133.762 kb on + strand, within B158DRAFT_0136at 133.913 kb on + strand, within B158DRAFT_0136at 133.918 kb on + strand, within B158DRAFT_0136at 133.921 kb on - strand, within B158DRAFT_0136at 133.926 kb on - strand, within B158DRAFT_0136at 134.001 kb on - strand, within B158DRAFT_0136at 134.106 kb on - strand, within B158DRAFT_0136at 134.131 kb on + strand, within B158DRAFT_0136at 134.170 kb on - strand, within B158DRAFT_0136at 134.441 kb on - strand, within B158DRAFT_0136at 134.491 kb on + strand, within B158DRAFT_0136at 134.643 kb on + strand, within B158DRAFT_0136at 134.651 kb on - strand, within B158DRAFT_0136at 134.835 kb on - strand, within B158DRAFT_0136at 134.879 kb on + strand, within B158DRAFT_0136at 134.880 kb on - strand, within B158DRAFT_0136at 134.887 kb on - strand, within B158DRAFT_0136at 134.914 kb on + strand, within B158DRAFT_0136at 134.922 kb on - strandat 134.998 kb on + strandat 135.000 kb on + strandat 135.013 kb on - strandat 135.068 kb on + strandat 135.222 kb on + strand, within B158DRAFT_0137at 135.224 kb on + strand, within B158DRAFT_0137at 135.230 kb on - strand, within B158DRAFT_0137at 135.240 kb on - strand, within B158DRAFT_0137at 135.267 kb on + strand, within B158DRAFT_0137at 135.267 kb on + strand, within B158DRAFT_0137at 135.275 kb on - strand, within B158DRAFT_0137at 135.309 kb on - strand, within B158DRAFT_0137at 135.321 kb on - strand, within B158DRAFT_0137at 135.326 kb on - strand, within B158DRAFT_0137at 135.336 kb on + strand, within B158DRAFT_0137at 135.354 kb on - strand, within B158DRAFT_0137at 135.375 kb on - strand, within B158DRAFT_0137at 135.379 kb on + strand, within B158DRAFT_0137at 135.387 kb on - strand, within B158DRAFT_0137at 135.421 kb on + strand, within B158DRAFT_0137at 135.438 kb on - strand, within B158DRAFT_0137at 135.509 kb on - strand, within B158DRAFT_0137at 135.519 kb on - strand, within B158DRAFT_0137at 135.521 kb on + strand, within B158DRAFT_0137at 135.521 kb on + strand, within B158DRAFT_0137at 135.521 kb on + strand, within B158DRAFT_0137at 135.521 kb on + strand, within B158DRAFT_0137at 135.524 kb on - strand, within B158DRAFT_0137at 135.529 kb on - strand, within B158DRAFT_0137at 135.529 kb on - strand, within B158DRAFT_0137at 135.529 kb on - strand, within B158DRAFT_0137at 135.529 kb on - strand, within B158DRAFT_0137at 135.642 kb on + strand, within B158DRAFT_0137at 135.643 kb on - strand, within B158DRAFT_0137at 135.644 kb on + strand, within B158DRAFT_0137at 135.649 kb on + strand, within B158DRAFT_0137at 135.650 kb on - strand, within B158DRAFT_0137at 135.887 kb on + strand, within B158DRAFT_0137at 135.999 kb on - strand, within B158DRAFT_0137at 136.071 kb on + strand, within B158DRAFT_0137

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM
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132,644 + B158DRAFT_0134 0.73 +3.0
132,656 + B158DRAFT_0134 0.74 +3.6
132,656 + B158DRAFT_0134 0.74 +4.2
132,656 + B158DRAFT_0134 0.74 +3.5
132,656 + B158DRAFT_0134 0.74 +3.3
132,656 + B158DRAFT_0134 0.74 +4.5
132,656 + B158DRAFT_0134 0.74 +3.8
132,656 + B158DRAFT_0134 0.74 +3.5
132,656 + B158DRAFT_0134 0.74 +4.1
132,656 + B158DRAFT_0134 0.74 +4.5
132,656 + B158DRAFT_0134 0.74 +3.9
132,664 - B158DRAFT_0134 0.75 +3.9
132,664 - B158DRAFT_0134 0.75 +3.6
132,664 - B158DRAFT_0134 0.75 +4.3
132,664 - B158DRAFT_0134 0.75 +4.1
132,664 - B158DRAFT_0134 0.75 +3.7
132,664 - B158DRAFT_0134 0.75 +3.8
132,664 - B158DRAFT_0134 0.75 +4.5
132,758 + B158DRAFT_0134 0.86 +3.7
132,766 - B158DRAFT_0134 0.87 +4.7
132,767 + B158DRAFT_0134 0.87 +4.5
132,767 + B158DRAFT_0134 0.87 +3.9
132,886 - +2.5
132,890 + +3.8
132,898 - +4.2
132,908 - +4.4
132,908 - +3.5
132,908 - +3.2
132,908 - +3.4
132,913 + +4.0
132,965 + +4.8
132,965 + +2.9
132,965 + +5.1
132,965 + +4.3
132,973 - B158DRAFT_0135 0.10 +3.6
132,973 - B158DRAFT_0135 0.10 +5.8
132,973 - B158DRAFT_0135 0.10 +3.2
133,011 - B158DRAFT_0135 0.17 +4.6
133,011 - B158DRAFT_0135 0.17 +4.6
133,073 - B158DRAFT_0135 0.28 +4.1
133,147 + B158DRAFT_0135 0.41 +3.8
133,155 - B158DRAFT_0135 0.42 +4.5
133,199 + B158DRAFT_0135 0.50 +4.3
133,205 + B158DRAFT_0135 0.51 +3.8
133,206 + B158DRAFT_0135 0.51 +4.0
133,207 - B158DRAFT_0135 0.51 +4.2
133,317 + B158DRAFT_0135 0.70 +3.7
133,317 + B158DRAFT_0135 0.70 +4.8
133,325 - B158DRAFT_0135 0.72 +5.1
133,410 + B158DRAFT_0135 0.87 +4.7
133,440 - +5.5
133,483 - +5.1
133,506 + +4.3
133,575 + +5.9
133,583 - +5.1
133,584 + +5.3
133,640 + +6.3
133,669 - B158DRAFT_0136 0.10 +4.9
133,669 - B158DRAFT_0136 0.10 +5.6
133,680 - B158DRAFT_0136 0.11 +6.0
133,692 + B158DRAFT_0136 0.11 +6.0
133,700 - B158DRAFT_0136 0.12 +6.2
133,762 + B158DRAFT_0136 0.16 +6.5
133,913 + B158DRAFT_0136 0.26 +5.9
133,918 + B158DRAFT_0136 0.26 +5.8
133,921 - B158DRAFT_0136 0.26 +5.6
133,926 - B158DRAFT_0136 0.26 +7.4
134,001 - B158DRAFT_0136 0.31 +6.0
134,106 - B158DRAFT_0136 0.38 +6.2
134,131 + B158DRAFT_0136 0.40 +6.2
134,170 - B158DRAFT_0136 0.42 +6.5
134,441 - B158DRAFT_0136 0.59 +9.5
134,491 + B158DRAFT_0136 0.63 +6.1
134,643 + B158DRAFT_0136 0.72 +5.9
134,651 - B158DRAFT_0136 0.73 +5.6
134,835 - B158DRAFT_0136 0.85 +5.5
134,879 + B158DRAFT_0136 0.88 +6.1
134,880 - B158DRAFT_0136 0.88 +5.6
134,887 - B158DRAFT_0136 0.88 +5.1
134,914 + B158DRAFT_0136 0.90 +5.7
134,922 - +6.2
134,998 + +6.0
135,000 + +6.1
135,013 - +6.6
135,068 + +5.5
135,222 + B158DRAFT_0137 0.13 +5.5
135,224 + B158DRAFT_0137 0.13 +3.3
135,230 - B158DRAFT_0137 0.13 +6.1
135,240 - B158DRAFT_0137 0.14 +4.2
135,267 + B158DRAFT_0137 0.16 +5.6
135,267 + B158DRAFT_0137 0.16 +4.7
135,275 - B158DRAFT_0137 0.17 +5.5
135,309 - B158DRAFT_0137 0.20 +5.7
135,321 - B158DRAFT_0137 0.21 +4.9
135,326 - B158DRAFT_0137 0.21 +4.6
135,336 + B158DRAFT_0137 0.22 +4.6
135,354 - B158DRAFT_0137 0.24 +5.0
135,375 - B158DRAFT_0137 0.26 +5.2
135,379 + B158DRAFT_0137 0.26 +6.2
135,387 - B158DRAFT_0137 0.27 +5.3
135,421 + B158DRAFT_0137 0.30 +5.2
135,438 - B158DRAFT_0137 0.31 +5.8
135,509 - B158DRAFT_0137 0.37 +5.8
135,519 - B158DRAFT_0137 0.38 +5.8
135,521 + B158DRAFT_0137 0.38 +5.5
135,521 + B158DRAFT_0137 0.38 +5.9
135,521 + B158DRAFT_0137 0.38 +5.5
135,521 + B158DRAFT_0137 0.38 +5.3
135,524 - B158DRAFT_0137 0.38 +5.5
135,529 - B158DRAFT_0137 0.39 +5.0
135,529 - B158DRAFT_0137 0.39 +5.2
135,529 - B158DRAFT_0137 0.39 +5.5
135,529 - B158DRAFT_0137 0.39 +5.3
135,642 + B158DRAFT_0137 0.48 +5.6
135,643 - B158DRAFT_0137 0.49 +5.5
135,644 + B158DRAFT_0137 0.49 +5.9
135,649 + B158DRAFT_0137 0.49 +5.0
135,650 - B158DRAFT_0137 0.49 +5.4
135,887 + B158DRAFT_0137 0.69 +1.3
135,999 - B158DRAFT_0137 0.79 +7.4
136,071 + B158DRAFT_0137 0.85 +5.9

Or see this region's nucleotide sequence