Experiment: m.b. Cholin acetate 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_0133 and B158DRAFT_0134 are separated by 70 nucleotides B158DRAFT_0134 and B158DRAFT_0135 are separated by 35 nucleotides B158DRAFT_0135 and B158DRAFT_0136 are separated by 27 nucleotides
B158DRAFT_0133: B158DRAFT_0133 - Uncharacterized iron-regulated protein, at 131,254 to 131,937
_0133
B158DRAFT_0134: B158DRAFT_0134 - Heme/copper-type cytochrome/quinol oxidase, subunit 3, at 132,008 to 132,880
_0134
B158DRAFT_0135: B158DRAFT_0135 - Cytochrome oxidase assembly factor, at 132,916 to 133,485
_0135
B158DRAFT_0136: B158DRAFT_0136 - cytochrome c oxidase, subunit I, at 133,513 to 135,072
_0136
Position (kb) 132
133
134 Strain fitness (log2 ratio) -1
0
1
2
3
4
5
6
7
8
9 at 131.940 kb on - strand at 131.940 kb on - strand at 132.014 kb on - strand at 132.034 kb on + strand at 132.039 kb on + strand at 132.139 kb on - strand, within B158DRAFT_0134 at 132.276 kb on + strand, within B158DRAFT_0134 at 132.284 kb on - strand, within B158DRAFT_0134 at 132.319 kb on + strand, within B158DRAFT_0134 at 132.327 kb on - strand, within B158DRAFT_0134 at 132.419 kb on - strand, within B158DRAFT_0134 at 132.481 kb on - strand, within B158DRAFT_0134 at 132.644 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.656 kb on + strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.664 kb on - strand, within B158DRAFT_0134 at 132.758 kb on + strand, within B158DRAFT_0134 at 132.766 kb on - strand, within B158DRAFT_0134 at 132.767 kb on + strand, within B158DRAFT_0134 at 132.767 kb on + strand, within B158DRAFT_0134 at 132.886 kb on - strand at 132.890 kb on + strand at 132.898 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.908 kb on - strand at 132.913 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.965 kb on + strand at 132.973 kb on - strand, within B158DRAFT_0135 at 132.973 kb on - strand, within B158DRAFT_0135 at 132.973 kb on - strand, within B158DRAFT_0135 at 133.011 kb on - strand, within B158DRAFT_0135 at 133.011 kb on - strand, within B158DRAFT_0135 at 133.073 kb on - strand, within B158DRAFT_0135 at 133.147 kb on + strand, within B158DRAFT_0135 at 133.155 kb on - strand, within B158DRAFT_0135 at 133.199 kb on + strand, within B158DRAFT_0135 at 133.205 kb on + strand, within B158DRAFT_0135 at 133.206 kb on + strand, within B158DRAFT_0135 at 133.207 kb on - strand, within B158DRAFT_0135 at 133.317 kb on + strand, within B158DRAFT_0135 at 133.317 kb on + strand, within B158DRAFT_0135 at 133.325 kb on - strand, within B158DRAFT_0135 at 133.410 kb on + strand, within B158DRAFT_0135 at 133.440 kb on - strand at 133.483 kb on - strand at 133.506 kb on + strand at 133.575 kb on + strand at 133.583 kb on - strand at 133.584 kb on + strand at 133.640 kb on + strand at 133.669 kb on - strand, within B158DRAFT_0136 at 133.669 kb on - strand, within B158DRAFT_0136 at 133.680 kb on - strand, within B158DRAFT_0136 at 133.692 kb on + strand, within B158DRAFT_0136 at 133.700 kb on - strand, within B158DRAFT_0136 at 133.762 kb on + strand, within B158DRAFT_0136 at 133.913 kb on + strand, within B158DRAFT_0136 at 133.918 kb on + strand, within B158DRAFT_0136 at 133.921 kb on - strand, within B158DRAFT_0136 at 133.926 kb on - strand, within B158DRAFT_0136 at 134.001 kb on - strand, within B158DRAFT_0136 at 134.106 kb on - strand, within B158DRAFT_0136 at 134.131 kb on + strand, within B158DRAFT_0136 at 134.170 kb on - strand, within B158DRAFT_0136 at 134.441 kb on - strand, within B158DRAFT_0136
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Cholin acetate 15 mM remove 131,940 - -0.7 131,940 - +0.0 132,014 - +0.8 132,034 + +2.9 132,039 + +3.7 132,139 - B158DRAFT_0134 0.15 +3.5 132,276 + B158DRAFT_0134 0.31 +3.8 132,284 - B158DRAFT_0134 0.32 +5.1 132,319 + B158DRAFT_0134 0.36 +2.4 132,327 - B158DRAFT_0134 0.37 +3.2 132,419 - B158DRAFT_0134 0.47 +4.3 132,481 - B158DRAFT_0134 0.54 +2.7 132,644 + B158DRAFT_0134 0.73 +3.0 132,656 + B158DRAFT_0134 0.74 +3.6 132,656 + B158DRAFT_0134 0.74 +4.2 132,656 + B158DRAFT_0134 0.74 +3.5 132,656 + B158DRAFT_0134 0.74 +3.3 132,656 + B158DRAFT_0134 0.74 +4.5 132,656 + B158DRAFT_0134 0.74 +3.8 132,656 + B158DRAFT_0134 0.74 +3.5 132,656 + B158DRAFT_0134 0.74 +4.1 132,656 + B158DRAFT_0134 0.74 +4.5 132,656 + B158DRAFT_0134 0.74 +3.9 132,664 - B158DRAFT_0134 0.75 +3.9 132,664 - B158DRAFT_0134 0.75 +3.6 132,664 - B158DRAFT_0134 0.75 +4.3 132,664 - B158DRAFT_0134 0.75 +4.1 132,664 - B158DRAFT_0134 0.75 +3.7 132,664 - B158DRAFT_0134 0.75 +3.8 132,664 - B158DRAFT_0134 0.75 +4.5 132,758 + B158DRAFT_0134 0.86 +3.7 132,766 - B158DRAFT_0134 0.87 +4.7 132,767 + B158DRAFT_0134 0.87 +4.5 132,767 + B158DRAFT_0134 0.87 +3.9 132,886 - +2.5 132,890 + +3.8 132,898 - +4.2 132,908 - +4.4 132,908 - +3.5 132,908 - +3.2 132,908 - +3.4 132,913 + +4.0 132,965 + +4.8 132,965 + +2.9 132,965 + +5.1 132,965 + +4.3 132,973 - B158DRAFT_0135 0.10 +3.6 132,973 - B158DRAFT_0135 0.10 +5.8 132,973 - B158DRAFT_0135 0.10 +3.2 133,011 - B158DRAFT_0135 0.17 +4.6 133,011 - B158DRAFT_0135 0.17 +4.6 133,073 - B158DRAFT_0135 0.28 +4.1 133,147 + B158DRAFT_0135 0.41 +3.8 133,155 - B158DRAFT_0135 0.42 +4.5 133,199 + B158DRAFT_0135 0.50 +4.3 133,205 + B158DRAFT_0135 0.51 +3.8 133,206 + B158DRAFT_0135 0.51 +4.0 133,207 - B158DRAFT_0135 0.51 +4.2 133,317 + B158DRAFT_0135 0.70 +3.7 133,317 + B158DRAFT_0135 0.70 +4.8 133,325 - B158DRAFT_0135 0.72 +5.1 133,410 + B158DRAFT_0135 0.87 +4.7 133,440 - +5.5 133,483 - +5.1 133,506 + +4.3 133,575 + +5.9 133,583 - +5.1 133,584 + +5.3 133,640 + +6.3 133,669 - B158DRAFT_0136 0.10 +4.9 133,669 - B158DRAFT_0136 0.10 +5.6 133,680 - B158DRAFT_0136 0.11 +6.0 133,692 + B158DRAFT_0136 0.11 +6.0 133,700 - B158DRAFT_0136 0.12 +6.2 133,762 + B158DRAFT_0136 0.16 +6.5 133,913 + B158DRAFT_0136 0.26 +5.9 133,918 + B158DRAFT_0136 0.26 +5.8 133,921 - B158DRAFT_0136 0.26 +5.6 133,926 - B158DRAFT_0136 0.26 +7.4 134,001 - B158DRAFT_0136 0.31 +6.0 134,106 - B158DRAFT_0136 0.38 +6.2 134,131 + B158DRAFT_0136 0.40 +6.2 134,170 - B158DRAFT_0136 0.42 +6.5 134,441 - B158DRAFT_0136 0.59 +9.5
Or see this region's nucleotide sequence