Experiment: m.b. Choline chloride 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2341 and B158DRAFT_2342 are separated by 335 nucleotides B158DRAFT_2342 and B158DRAFT_2343 overlap by 4 nucleotides B158DRAFT_2343 and B158DRAFT_2344 are separated by 131 nucleotides
B158DRAFT_2341: B158DRAFT_2341 - Excinuclease ABC subunit B, at 505,885 to 507,873
_2341
B158DRAFT_2342: B158DRAFT_2342 - ABC-type transport system involved in resistance to organic solvents, auxiliary component, at 508,209 to 508,850
_2342
B158DRAFT_2343: B158DRAFT_2343 - transcriptional activator RfaH, at 508,847 to 509,350
_2343
B158DRAFT_2344: B158DRAFT_2344 - 3'(2'),5'-bisphosphate nucleotidase (EC 3.1.3.7), at 509,482 to 510,339
_2344
Position (kb) 508
509
510 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2 at 507.869 kb on + strand at 507.869 kb on + strand at 507.869 kb on + strand at 507.877 kb on - strand at 507.877 kb on - strand at 507.877 kb on - strand at 507.893 kb on + strand at 507.893 kb on + strand at 507.893 kb on + strand at 507.900 kb on - strand at 507.900 kb on - strand at 507.901 kb on - strand at 507.901 kb on - strand at 507.904 kb on + strand at 507.904 kb on + strand at 507.907 kb on - strand at 507.907 kb on - strand at 507.907 kb on - strand at 507.912 kb on - strand at 507.912 kb on - strand at 507.916 kb on - strand at 507.916 kb on - strand at 507.949 kb on + strand at 507.949 kb on + strand at 507.949 kb on + strand at 507.957 kb on - strand at 507.959 kb on + strand at 507.959 kb on + strand at 507.971 kb on + strand at 507.972 kb on + strand at 507.979 kb on - strand at 507.979 kb on - strand at 507.979 kb on - strand at 507.979 kb on - strand at 507.980 kb on - strand at 508.023 kb on - strand at 508.058 kb on - strand at 508.067 kb on - strand at 508.071 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.078 kb on + strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.086 kb on - strand at 508.099 kb on + strand at 508.105 kb on - strand at 508.109 kb on + strand at 508.121 kb on + strand at 508.135 kb on + strand at 508.155 kb on + strand at 508.155 kb on + strand at 508.155 kb on + strand at 508.163 kb on - strand at 508.163 kb on - strand at 508.163 kb on - strand at 508.163 kb on - strand at 508.202 kb on - strand at 508.202 kb on - strand at 508.202 kb on - strand at 508.310 kb on + strand, within B158DRAFT_2342 at 508.318 kb on - strand, within B158DRAFT_2342 at 508.318 kb on - strand, within B158DRAFT_2342 at 508.322 kb on - strand, within B158DRAFT_2342 at 508.377 kb on + strand, within B158DRAFT_2342 at 508.409 kb on - strand, within B158DRAFT_2342 at 508.419 kb on - strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.445 kb on + strand, within B158DRAFT_2342 at 508.453 kb on - strand, within B158DRAFT_2342 at 508.453 kb on - strand, within B158DRAFT_2342 at 508.462 kb on + strand, within B158DRAFT_2342 at 508.462 kb on + strand, within B158DRAFT_2342 at 508.470 kb on - strand, within B158DRAFT_2342 at 508.470 kb on - strand, within B158DRAFT_2342 at 508.486 kb on + strand, within B158DRAFT_2342 at 508.532 kb on + strand, within B158DRAFT_2342 at 508.532 kb on + strand, within B158DRAFT_2342 at 508.532 kb on + strand, within B158DRAFT_2342 at 508.540 kb on - strand, within B158DRAFT_2342 at 508.540 kb on - strand, within B158DRAFT_2342 at 508.601 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.612 kb on + strand, within B158DRAFT_2342 at 508.620 kb on - strand, within B158DRAFT_2342 at 508.620 kb on - strand, within B158DRAFT_2342 at 508.620 kb on - strand, within B158DRAFT_2342 at 508.621 kb on - strand, within B158DRAFT_2342 at 508.623 kb on + strand, within B158DRAFT_2342 at 508.631 kb on - strand, within B158DRAFT_2342 at 508.655 kb on - strand, within B158DRAFT_2342 at 508.695 kb on + strand, within B158DRAFT_2342 at 508.703 kb on - strand, within B158DRAFT_2342 at 508.703 kb on - strand, within B158DRAFT_2342 at 508.703 kb on - strand, within B158DRAFT_2342 at 508.703 kb on - strand, within B158DRAFT_2342 at 508.781 kb on - strand, within B158DRAFT_2342 at 508.793 kb on - strand at 508.896 kb on - strand at 509.038 kb on + strand, within B158DRAFT_2343 at 509.040 kb on + strand, within B158DRAFT_2343 at 509.040 kb on - strand, within B158DRAFT_2343 at 509.055 kb on + strand, within B158DRAFT_2343 at 509.058 kb on - strand, within B158DRAFT_2343 at 509.063 kb on - strand, within B158DRAFT_2343 at 509.108 kb on + strand, within B158DRAFT_2343 at 509.108 kb on + strand, within B158DRAFT_2343 at 509.116 kb on - strand, within B158DRAFT_2343 at 509.120 kb on + strand, within B158DRAFT_2343 at 509.128 kb on - strand, within B158DRAFT_2343 at 509.128 kb on - strand, within B158DRAFT_2343 at 509.140 kb on - strand, within B158DRAFT_2343 at 509.353 kb on - strand at 509.391 kb on - strand at 509.406 kb on + strand at 509.514 kb on + strand at 509.522 kb on - strand at 509.784 kb on - strand, within B158DRAFT_2344 at 509.895 kb on - strand, within B158DRAFT_2344 at 510.023 kb on - strand, within B158DRAFT_2344 at 510.110 kb on - strand, within B158DRAFT_2344 at 510.210 kb on - strand, within B158DRAFT_2344 at 510.319 kb on - strand at 510.320 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM remove 507,869 + +0.1 507,869 + -0.5 507,869 + -0.6 507,877 - +0.2 507,877 - -0.2 507,877 - +0.6 507,893 + -0.2 507,893 + -0.5 507,893 + +0.0 507,900 - -0.5 507,900 - -0.1 507,901 - -0.5 507,901 - -0.2 507,904 + -0.1 507,904 + -0.4 507,907 - -0.3 507,907 - +0.0 507,907 - -0.1 507,912 - -0.2 507,912 - +1.2 507,916 - +0.1 507,916 - +0.3 507,949 + +0.0 507,949 + +0.1 507,949 + -0.0 507,957 - -0.1 507,959 + +0.3 507,959 + -0.0 507,971 + -0.4 507,972 + +0.0 507,979 - -0.0 507,979 - +0.1 507,979 - -0.2 507,979 - -0.5 507,980 - -0.3 508,023 - +0.5 508,058 - -0.4 508,067 - -0.6 508,071 + -0.1 508,078 + -0.0 508,078 + +0.1 508,078 + -0.0 508,078 + +0.2 508,078 + -0.4 508,078 + +0.2 508,078 + +0.0 508,078 + -0.2 508,086 - -2.4 508,086 - -2.9 508,086 - -3.4 508,086 - -3.1 508,086 - -1.8 508,086 - -2.4 508,086 - -1.8 508,086 - -3.8 508,086 - -3.2 508,086 - -2.5 508,099 + +0.0 508,105 - -4.0 508,109 + -0.2 508,121 + +0.5 508,135 + -0.2 508,155 + +0.1 508,155 + -0.6 508,155 + +0.0 508,163 - -2.6 508,163 - -2.8 508,163 - -2.6 508,163 - -3.3 508,202 - -3.4 508,202 - -3.6 508,202 - -4.3 508,310 + B158DRAFT_2342 0.16 -1.6 508,318 - B158DRAFT_2342 0.17 -2.9 508,318 - B158DRAFT_2342 0.17 -0.3 508,322 - B158DRAFT_2342 0.18 -4.6 508,377 + B158DRAFT_2342 0.26 -2.8 508,409 - B158DRAFT_2342 0.31 -4.6 508,419 - B158DRAFT_2342 0.33 -3.2 508,445 + B158DRAFT_2342 0.37 -3.3 508,445 + B158DRAFT_2342 0.37 -3.1 508,445 + B158DRAFT_2342 0.37 -2.1 508,445 + B158DRAFT_2342 0.37 -2.7 508,445 + B158DRAFT_2342 0.37 -2.3 508,445 + B158DRAFT_2342 0.37 -3.7 508,453 - B158DRAFT_2342 0.38 -4.1 508,453 - B158DRAFT_2342 0.38 -2.2 508,462 + B158DRAFT_2342 0.39 -1.8 508,462 + B158DRAFT_2342 0.39 -2.7 508,470 - B158DRAFT_2342 0.41 -2.8 508,470 - B158DRAFT_2342 0.41 -4.1 508,486 + B158DRAFT_2342 0.43 -1.4 508,532 + B158DRAFT_2342 0.50 -4.0 508,532 + B158DRAFT_2342 0.50 -1.8 508,532 + B158DRAFT_2342 0.50 -2.9 508,540 - B158DRAFT_2342 0.52 -3.6 508,540 - B158DRAFT_2342 0.52 -3.2 508,601 + B158DRAFT_2342 0.61 -3.4 508,612 + B158DRAFT_2342 0.63 -0.5 508,612 + B158DRAFT_2342 0.63 -1.8 508,612 + B158DRAFT_2342 0.63 -2.9 508,612 + B158DRAFT_2342 0.63 -3.4 508,612 + B158DRAFT_2342 0.63 -3.1 508,612 + B158DRAFT_2342 0.63 -4.4 508,612 + B158DRAFT_2342 0.63 -1.9 508,612 + B158DRAFT_2342 0.63 -1.1 508,620 - B158DRAFT_2342 0.64 -4.2 508,620 - B158DRAFT_2342 0.64 -4.8 508,620 - B158DRAFT_2342 0.64 -3.2 508,621 - B158DRAFT_2342 0.64 -3.0 508,623 + B158DRAFT_2342 0.64 -2.7 508,631 - B158DRAFT_2342 0.66 -4.2 508,655 - B158DRAFT_2342 0.69 -2.8 508,695 + B158DRAFT_2342 0.76 -4.0 508,703 - B158DRAFT_2342 0.77 -1.3 508,703 - B158DRAFT_2342 0.77 -2.6 508,703 - B158DRAFT_2342 0.77 -4.5 508,703 - B158DRAFT_2342 0.77 -3.0 508,781 - B158DRAFT_2342 0.89 -1.2 508,793 - -4.3 508,896 - -1.4 509,038 + B158DRAFT_2343 0.38 -1.2 509,040 + B158DRAFT_2343 0.38 -1.3 509,040 - B158DRAFT_2343 0.38 -2.4 509,055 + B158DRAFT_2343 0.41 -1.3 509,058 - B158DRAFT_2343 0.42 -1.5 509,063 - B158DRAFT_2343 0.43 -2.5 509,108 + B158DRAFT_2343 0.52 -1.5 509,108 + B158DRAFT_2343 0.52 -1.7 509,116 - B158DRAFT_2343 0.53 -1.9 509,120 + B158DRAFT_2343 0.54 -2.1 509,128 - B158DRAFT_2343 0.56 -1.6 509,128 - B158DRAFT_2343 0.56 -1.0 509,140 - B158DRAFT_2343 0.58 -2.0 509,353 - -0.2 509,391 - -1.3 509,406 + +0.2 509,514 + +0.3 509,522 - -1.2 509,784 - B158DRAFT_2344 0.35 +1.0 509,895 - B158DRAFT_2344 0.48 +1.6 510,023 - B158DRAFT_2344 0.63 +1.8 510,110 - B158DRAFT_2344 0.73 +2.6 510,210 - B158DRAFT_2344 0.85 +1.6 510,319 - -1.5 510,320 + +1.2
Or see this region's nucleotide sequence