Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_2232

Experiment: m.b. Choline chloride 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_2230 and B158DRAFT_2231 are separated by 133 nucleotidesB158DRAFT_2231 and B158DRAFT_2232 are separated by 272 nucleotidesB158DRAFT_2232 and B158DRAFT_2233 are separated by 28 nucleotides B158DRAFT_2230: B158DRAFT_2230 - hypothetical protein, at 383,726 to 384,424 _2230 B158DRAFT_2231: B158DRAFT_2231 - Glutaredoxin-like domain (DUF836)., at 384,558 to 384,824 _2231 B158DRAFT_2232: B158DRAFT_2232 - transcriptional regulator, TetR family, at 385,097 to 385,726 _2232 B158DRAFT_2233: B158DRAFT_2233 - Acyl-CoA dehydrogenases, at 385,755 to 388,226 _2233 Position (kb) 385 386Strain fitness (log2 ratio) -2 -1 0 1at 384.178 kb on - strand, within B158DRAFT_2230at 384.201 kb on + strand, within B158DRAFT_2230at 384.201 kb on + strand, within B158DRAFT_2230at 384.209 kb on - strand, within B158DRAFT_2230at 384.209 kb on - strand, within B158DRAFT_2230at 384.209 kb on - strand, within B158DRAFT_2230at 384.768 kb on + strand, within B158DRAFT_2231at 384.878 kb on - strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.914 kb on + strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.922 kb on - strandat 384.929 kb on - strandat 384.981 kb on + strandat 384.981 kb on + strandat 385.005 kb on - strandat 385.092 kb on - strandat 385.092 kb on - strandat 385.099 kb on + strandat 385.107 kb on - strandat 385.130 kb on - strandat 385.196 kb on + strand, within B158DRAFT_2232at 385.214 kb on - strand, within B158DRAFT_2232at 385.219 kb on - strand, within B158DRAFT_2232at 385.263 kb on - strand, within B158DRAFT_2232at 385.273 kb on - strand, within B158DRAFT_2232at 385.298 kb on + strand, within B158DRAFT_2232at 385.305 kb on + strand, within B158DRAFT_2232at 385.313 kb on - strand, within B158DRAFT_2232at 385.313 kb on - strand, within B158DRAFT_2232at 385.320 kb on + strand, within B158DRAFT_2232at 385.320 kb on + strand, within B158DRAFT_2232at 385.320 kb on + strand, within B158DRAFT_2232at 385.328 kb on - strand, within B158DRAFT_2232at 385.330 kb on + strand, within B158DRAFT_2232at 385.330 kb on + strand, within B158DRAFT_2232at 385.330 kb on + strand, within B158DRAFT_2232at 385.338 kb on - strand, within B158DRAFT_2232at 385.338 kb on - strand, within B158DRAFT_2232at 385.340 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.375 kb on + strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.383 kb on - strand, within B158DRAFT_2232at 385.447 kb on + strand, within B158DRAFT_2232at 385.508 kb on - strand, within B158DRAFT_2232at 385.542 kb on + strand, within B158DRAFT_2232at 385.616 kb on - strand, within B158DRAFT_2232at 385.889 kb on - strandat 385.889 kb on - strandat 385.908 kb on + strandat 385.908 kb on + strandat 385.916 kb on - strandat 385.916 kb on - strandat 385.916 kb on - strandat 385.916 kb on - strandat 385.916 kb on - strandat 385.916 kb on - strandat 386.168 kb on + strand, within B158DRAFT_2233at 386.173 kb on + strand, within B158DRAFT_2233at 386.176 kb on - strand, within B158DRAFT_2233at 386.176 kb on - strand, within B158DRAFT_2233at 386.181 kb on - strand, within B158DRAFT_2233at 386.181 kb on - strand, within B158DRAFT_2233at 386.181 kb on - strand, within B158DRAFT_2233at 386.207 kb on + strand, within B158DRAFT_2233at 386.255 kb on - strand, within B158DRAFT_2233at 386.255 kb on - strand, within B158DRAFT_2233at 386.289 kb on + strand, within B158DRAFT_2233at 386.304 kb on + strand, within B158DRAFT_2233at 386.312 kb on - strand, within B158DRAFT_2233at 386.373 kb on - strand, within B158DRAFT_2233at 386.389 kb on + strand, within B158DRAFT_2233at 386.397 kb on - strand, within B158DRAFT_2233at 386.397 kb on - strand, within B158DRAFT_2233at 386.408 kb on + strand, within B158DRAFT_2233at 386.468 kb on + strand, within B158DRAFT_2233at 386.481 kb on + strand, within B158DRAFT_2233at 386.481 kb on + strand, within B158DRAFT_2233at 386.481 kb on + strand, within B158DRAFT_2233at 386.489 kb on - strand, within B158DRAFT_2233at 386.489 kb on - strand, within B158DRAFT_2233at 386.511 kb on - strand, within B158DRAFT_2233at 386.532 kb on + strand, within B158DRAFT_2233at 386.625 kb on + strand, within B158DRAFT_2233

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM
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384,178 - B158DRAFT_2230 0.65 -2.3
384,201 + B158DRAFT_2230 0.68 -2.6
384,201 + B158DRAFT_2230 0.68 -2.3
384,209 - B158DRAFT_2230 0.69 -2.2
384,209 - B158DRAFT_2230 0.69 -1.0
384,209 - B158DRAFT_2230 0.69 -1.8
384,768 + B158DRAFT_2231 0.79 +0.3
384,878 - +0.5
384,914 + -0.4
384,914 + -0.5
384,914 + -0.0
384,914 + +0.3
384,914 + -0.0
384,914 + -1.0
384,914 + -0.1
384,914 + -0.0
384,914 + -1.0
384,914 + -0.3
384,914 + -0.2
384,914 + +0.1
384,914 + -1.2
384,914 + -0.4
384,914 + +0.8
384,914 + +0.1
384,914 + +0.0
384,914 + -0.5
384,914 + -0.3
384,914 + -0.3
384,914 + -0.6
384,914 + -0.2
384,914 + -1.4
384,914 + -0.3
384,914 + -0.7
384,914 + -0.3
384,914 + -0.5
384,922 - -1.0
384,922 - -0.3
384,922 - +0.9
384,922 - -0.1
384,922 - +0.8
384,922 - +0.2
384,922 - -0.1
384,922 - +1.0
384,922 - -0.0
384,922 - -0.2
384,922 - -0.0
384,922 - -0.2
384,922 - +0.0
384,922 - -0.3
384,922 - +0.3
384,922 - +0.0
384,922 - +0.1
384,922 - +0.4
384,922 - +0.6
384,929 - +0.0
384,981 + +0.1
384,981 + +1.4
385,005 - +0.0
385,092 - +0.7
385,092 - +0.8
385,099 + +0.6
385,107 - +1.1
385,130 - +1.1
385,196 + B158DRAFT_2232 0.16 +0.6
385,214 - B158DRAFT_2232 0.19 +0.7
385,219 - B158DRAFT_2232 0.19 +0.5
385,263 - B158DRAFT_2232 0.26 +1.0
385,273 - B158DRAFT_2232 0.28 +0.4
385,298 + B158DRAFT_2232 0.32 +0.3
385,305 + B158DRAFT_2232 0.33 +1.2
385,313 - B158DRAFT_2232 0.34 +0.3
385,313 - B158DRAFT_2232 0.34 +1.2
385,320 + B158DRAFT_2232 0.35 +0.7
385,320 + B158DRAFT_2232 0.35 +0.6
385,320 + B158DRAFT_2232 0.35 +0.4
385,328 - B158DRAFT_2232 0.37 +1.4
385,330 + B158DRAFT_2232 0.37 +0.7
385,330 + B158DRAFT_2232 0.37 +0.7
385,330 + B158DRAFT_2232 0.37 +0.4
385,338 - B158DRAFT_2232 0.38 +1.1
385,338 - B158DRAFT_2232 0.38 +0.4
385,340 + B158DRAFT_2232 0.39 +0.2
385,375 + B158DRAFT_2232 0.44 +0.5
385,375 + B158DRAFT_2232 0.44 -0.1
385,375 + B158DRAFT_2232 0.44 +0.4
385,375 + B158DRAFT_2232 0.44 +0.5
385,375 + B158DRAFT_2232 0.44 +0.8
385,375 + B158DRAFT_2232 0.44 +0.8
385,375 + B158DRAFT_2232 0.44 +0.3
385,375 + B158DRAFT_2232 0.44 +0.2
385,375 + B158DRAFT_2232 0.44 +0.1
385,375 + B158DRAFT_2232 0.44 +0.5
385,383 - B158DRAFT_2232 0.45 +0.7
385,383 - B158DRAFT_2232 0.45 +1.1
385,383 - B158DRAFT_2232 0.45 +0.8
385,383 - B158DRAFT_2232 0.45 +0.5
385,383 - B158DRAFT_2232 0.45 -0.1
385,383 - B158DRAFT_2232 0.45 +0.9
385,383 - B158DRAFT_2232 0.45 +0.6
385,383 - B158DRAFT_2232 0.45 +1.0
385,383 - B158DRAFT_2232 0.45 +0.8
385,383 - B158DRAFT_2232 0.45 +0.6
385,447 + B158DRAFT_2232 0.56 +0.5
385,508 - B158DRAFT_2232 0.65 +1.2
385,542 + B158DRAFT_2232 0.71 -0.3
385,616 - B158DRAFT_2232 0.82 +0.9
385,889 - +0.7
385,889 - +0.5
385,908 + -0.1
385,908 + -0.7
385,916 - +0.2
385,916 - +0.3
385,916 - +0.2
385,916 - +0.2
385,916 - +0.4
385,916 - +0.2
386,168 + B158DRAFT_2233 0.17 +0.5
386,173 + B158DRAFT_2233 0.17 +0.4
386,176 - B158DRAFT_2233 0.17 +0.2
386,176 - B158DRAFT_2233 0.17 -0.0
386,181 - B158DRAFT_2233 0.17 +0.2
386,181 - B158DRAFT_2233 0.17 +0.6
386,181 - B158DRAFT_2233 0.17 -1.8
386,207 + B158DRAFT_2233 0.18 -0.2
386,255 - B158DRAFT_2233 0.20 -0.2
386,255 - B158DRAFT_2233 0.20 -0.6
386,289 + B158DRAFT_2233 0.22 -0.3
386,304 + B158DRAFT_2233 0.22 +0.3
386,312 - B158DRAFT_2233 0.23 +0.5
386,373 - B158DRAFT_2233 0.25 +0.8
386,389 + B158DRAFT_2233 0.26 +0.2
386,397 - B158DRAFT_2233 0.26 +0.7
386,397 - B158DRAFT_2233 0.26 -2.1
386,408 + B158DRAFT_2233 0.26 +0.1
386,468 + B158DRAFT_2233 0.29 -0.9
386,481 + B158DRAFT_2233 0.29 +0.1
386,481 + B158DRAFT_2233 0.29 +0.1
386,481 + B158DRAFT_2233 0.29 -0.1
386,489 - B158DRAFT_2233 0.30 -0.2
386,489 - B158DRAFT_2233 0.30 +0.3
386,511 - B158DRAFT_2233 0.31 +0.0
386,532 + B158DRAFT_2233 0.31 +0.4
386,625 + B158DRAFT_2233 0.35 -0.0

Or see this region's nucleotide sequence