Experiment: m.b. Choline chloride 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_2157 and B158DRAFT_2158 are separated by 147 nucleotides B158DRAFT_2158 and B158DRAFT_2159 are separated by 4 nucleotides B158DRAFT_2159 and B158DRAFT_2160 are separated by 116 nucleotides
B158DRAFT_2157: B158DRAFT_2157 - 16S RNA G1207 methylase RsmC, at 296,344 to 296,937
_2157
B158DRAFT_2158: B158DRAFT_2158 - Predicted SAM-dependent methyltransferase, at 297,085 to 298,161
_2158
B158DRAFT_2159: B158DRAFT_2159 - 7-cyano-7-deazaguanine reductase, at 298,166 to 299,002
_2159
B158DRAFT_2160: B158DRAFT_2160 - sulfite reductase (NADPH) alpha subunit (EC 1.8.1.2), at 299,119 to 300,960
_2160
Position (kb) 297
298
299 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 296.267 kb on + strand at 296.323 kb on + strand at 296.334 kb on + strand at 296.342 kb on - strand at 296.374 kb on + strand at 296.392 kb on - strand at 296.585 kb on + strand, within B158DRAFT_2157 at 296.599 kb on + strand, within B158DRAFT_2157 at 296.604 kb on + strand, within B158DRAFT_2157 at 296.615 kb on - strand, within B158DRAFT_2157 at 296.627 kb on + strand, within B158DRAFT_2157 at 296.627 kb on + strand, within B158DRAFT_2157 at 296.635 kb on - strand, within B158DRAFT_2157 at 296.659 kb on - strand, within B158DRAFT_2157 at 296.733 kb on - strand, within B158DRAFT_2157 at 296.734 kb on + strand, within B158DRAFT_2157 at 296.741 kb on + strand, within B158DRAFT_2157 at 296.742 kb on - strand, within B158DRAFT_2157 at 296.749 kb on - strand, within B158DRAFT_2157 at 296.751 kb on + strand, within B158DRAFT_2157 at 296.751 kb on + strand, within B158DRAFT_2157 at 296.751 kb on + strand, within B158DRAFT_2157 at 296.769 kb on - strand, within B158DRAFT_2157 at 296.830 kb on + strand, within B158DRAFT_2157 at 296.835 kb on + strand, within B158DRAFT_2157 at 296.838 kb on - strand, within B158DRAFT_2157 at 296.939 kb on + strand at 296.939 kb on + strand at 296.945 kb on + strand at 296.945 kb on + strand at 296.951 kb on + strand at 296.953 kb on - strand at 296.959 kb on - strand at 296.959 kb on - strand at 297.000 kb on - strand at 297.016 kb on - strand at 297.121 kb on + strand at 297.132 kb on + strand at 297.132 kb on + strand at 297.137 kb on + strand at 297.172 kb on + strand at 297.185 kb on + strand at 297.202 kb on + strand, within B158DRAFT_2158 at 297.226 kb on - strand, within B158DRAFT_2158 at 297.235 kb on - strand, within B158DRAFT_2158 at 297.311 kb on + strand, within B158DRAFT_2158 at 297.358 kb on - strand, within B158DRAFT_2158 at 297.363 kb on + strand, within B158DRAFT_2158 at 297.364 kb on - strand, within B158DRAFT_2158 at 297.378 kb on + strand, within B158DRAFT_2158 at 297.379 kb on - strand, within B158DRAFT_2158 at 297.381 kb on - strand, within B158DRAFT_2158 at 297.381 kb on - strand, within B158DRAFT_2158 at 297.386 kb on - strand, within B158DRAFT_2158 at 297.401 kb on - strand, within B158DRAFT_2158 at 297.406 kb on + strand, within B158DRAFT_2158 at 297.414 kb on - strand, within B158DRAFT_2158 at 297.424 kb on - strand, within B158DRAFT_2158 at 297.425 kb on + strand, within B158DRAFT_2158 at 297.425 kb on + strand, within B158DRAFT_2158 at 297.425 kb on + strand, within B158DRAFT_2158 at 297.463 kb on + strand, within B158DRAFT_2158 at 297.463 kb on + strand, within B158DRAFT_2158 at 297.471 kb on - strand, within B158DRAFT_2158 at 297.554 kb on - strand, within B158DRAFT_2158 at 297.643 kb on + strand, within B158DRAFT_2158 at 297.651 kb on - strand, within B158DRAFT_2158 at 297.652 kb on - strand, within B158DRAFT_2158 at 297.721 kb on + strand, within B158DRAFT_2158 at 297.721 kb on + strand, within B158DRAFT_2158 at 297.721 kb on + strand, within B158DRAFT_2158 at 297.721 kb on + strand, within B158DRAFT_2158 at 297.729 kb on - strand, within B158DRAFT_2158 at 297.952 kb on - strand, within B158DRAFT_2158 at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.156 kb on + strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.164 kb on - strand at 298.187 kb on + strand at 298.200 kb on - strand at 298.233 kb on + strand at 298.336 kb on - strand, within B158DRAFT_2159 at 298.374 kb on + strand, within B158DRAFT_2159 at 298.410 kb on + strand, within B158DRAFT_2159 at 298.428 kb on + strand, within B158DRAFT_2159 at 298.449 kb on + strand, within B158DRAFT_2159 at 298.517 kb on + strand, within B158DRAFT_2159 at 298.552 kb on + strand, within B158DRAFT_2159 at 298.574 kb on + strand, within B158DRAFT_2159 at 298.625 kb on - strand, within B158DRAFT_2159 at 298.625 kb on - strand, within B158DRAFT_2159 at 298.625 kb on - strand, within B158DRAFT_2159 at 298.625 kb on - strand, within B158DRAFT_2159 at 298.652 kb on - strand, within B158DRAFT_2159 at 298.705 kb on + strand, within B158DRAFT_2159 at 298.887 kb on + strand, within B158DRAFT_2159 at 298.887 kb on + strand, within B158DRAFT_2159 at 298.974 kb on + strand at 298.974 kb on + strand at 298.979 kb on + strand at 298.979 kb on + strand at 298.979 kb on + strand at 298.982 kb on - strand at 298.984 kb on + strand at 298.987 kb on - strand at 299.101 kb on - strand at 299.102 kb on - strand at 299.146 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM remove 296,267 + -0.1 296,323 + -0.1 296,334 + -0.1 296,342 - -1.1 296,374 + -0.5 296,392 - -0.6 296,585 + B158DRAFT_2157 0.41 -0.5 296,599 + B158DRAFT_2157 0.43 -0.4 296,604 + B158DRAFT_2157 0.44 -0.4 296,615 - B158DRAFT_2157 0.46 -0.3 296,627 + B158DRAFT_2157 0.48 -0.0 296,627 + B158DRAFT_2157 0.48 +0.2 296,635 - B158DRAFT_2157 0.49 -0.1 296,659 - B158DRAFT_2157 0.53 +0.0 296,733 - B158DRAFT_2157 0.65 +0.5 296,734 + B158DRAFT_2157 0.66 -0.2 296,741 + B158DRAFT_2157 0.67 +0.7 296,742 - B158DRAFT_2157 0.67 +0.0 296,749 - B158DRAFT_2157 0.68 -0.4 296,751 + B158DRAFT_2157 0.69 -0.1 296,751 + B158DRAFT_2157 0.69 +0.2 296,751 + B158DRAFT_2157 0.69 -0.5 296,769 - B158DRAFT_2157 0.72 +0.4 296,830 + B158DRAFT_2157 0.82 +0.5 296,835 + B158DRAFT_2157 0.83 -0.1 296,838 - B158DRAFT_2157 0.83 -0.1 296,939 + -0.4 296,939 + -0.2 296,945 + +0.4 296,945 + +0.9 296,951 + -0.0 296,953 - -0.2 296,959 - -0.6 296,959 - +0.1 297,000 - -0.5 297,016 - +0.4 297,121 + -0.3 297,132 + +0.1 297,132 + -0.5 297,137 + +0.4 297,172 + -0.3 297,185 + -0.7 297,202 + B158DRAFT_2158 0.11 -0.9 297,226 - B158DRAFT_2158 0.13 -0.4 297,235 - B158DRAFT_2158 0.14 -0.7 297,311 + B158DRAFT_2158 0.21 -0.6 297,358 - B158DRAFT_2158 0.25 -1.2 297,363 + B158DRAFT_2158 0.26 -0.4 297,364 - B158DRAFT_2158 0.26 -0.7 297,378 + B158DRAFT_2158 0.27 -0.4 297,379 - B158DRAFT_2158 0.27 -0.3 297,381 - B158DRAFT_2158 0.27 -0.8 297,381 - B158DRAFT_2158 0.27 -0.1 297,386 - B158DRAFT_2158 0.28 -0.3 297,401 - B158DRAFT_2158 0.29 -0.6 297,406 + B158DRAFT_2158 0.30 -0.5 297,414 - B158DRAFT_2158 0.31 -0.4 297,424 - B158DRAFT_2158 0.31 -0.6 297,425 + B158DRAFT_2158 0.32 -1.0 297,425 + B158DRAFT_2158 0.32 -0.5 297,425 + B158DRAFT_2158 0.32 -0.6 297,463 + B158DRAFT_2158 0.35 -0.0 297,463 + B158DRAFT_2158 0.35 -0.8 297,471 - B158DRAFT_2158 0.36 -1.0 297,554 - B158DRAFT_2158 0.44 -0.6 297,643 + B158DRAFT_2158 0.52 -0.6 297,651 - B158DRAFT_2158 0.53 -0.3 297,652 - B158DRAFT_2158 0.53 -0.3 297,721 + B158DRAFT_2158 0.59 -0.2 297,721 + B158DRAFT_2158 0.59 -1.3 297,721 + B158DRAFT_2158 0.59 -1.1 297,721 + B158DRAFT_2158 0.59 -0.4 297,729 - B158DRAFT_2158 0.60 -0.9 297,952 - B158DRAFT_2158 0.81 -0.2 298,156 + -0.2 298,156 + -0.7 298,156 + -0.2 298,156 + -0.5 298,156 + +0.0 298,156 + +0.7 298,156 + -0.4 298,156 + -0.3 298,156 + -0.7 298,156 + -0.5 298,164 - -1.2 298,164 - -1.0 298,164 - -0.8 298,164 - -1.0 298,164 - -0.8 298,164 - -0.4 298,164 - -0.7 298,164 - -1.6 298,187 + -0.7 298,200 - -0.1 298,233 + -1.1 298,336 - B158DRAFT_2159 0.20 -0.9 298,374 + B158DRAFT_2159 0.25 -0.9 298,410 + B158DRAFT_2159 0.29 -1.1 298,428 + B158DRAFT_2159 0.31 -0.2 298,449 + B158DRAFT_2159 0.34 -1.0 298,517 + B158DRAFT_2159 0.42 -0.3 298,552 + B158DRAFT_2159 0.46 -1.0 298,574 + B158DRAFT_2159 0.49 -0.3 298,625 - B158DRAFT_2159 0.55 -0.9 298,625 - B158DRAFT_2159 0.55 -0.3 298,625 - B158DRAFT_2159 0.55 -0.9 298,625 - B158DRAFT_2159 0.55 -0.6 298,652 - B158DRAFT_2159 0.58 -0.8 298,705 + B158DRAFT_2159 0.64 -1.0 298,887 + B158DRAFT_2159 0.86 +0.1 298,887 + B158DRAFT_2159 0.86 -0.5 298,974 + -0.7 298,974 + -1.1 298,979 + -1.0 298,979 + -3.3 298,979 + -0.7 298,982 - -0.6 298,984 + -1.3 298,987 - -1.5 299,101 - -0.5 299,102 - +0.3 299,146 + -0.2
Or see this region's nucleotide sequence