Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1334

Experiment: m.b. Choline chloride 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1332 and B158DRAFT_1333 are separated by 74 nucleotidesB158DRAFT_1333 and B158DRAFT_1334 are separated by 9 nucleotidesB158DRAFT_1334 and B158DRAFT_1335 are separated by 88 nucleotidesB158DRAFT_1335 and B158DRAFT_1336 are separated by 35 nucleotides B158DRAFT_1332: B158DRAFT_1332 - Uncharacterized low-complexity protein, at 1,373,959 to 1,374,324 _1332 B158DRAFT_1333: B158DRAFT_1333 - component of chlorite stress sensing system with B158DRAFT_1334 (DUF2063) (from data), at 1,374,399 to 1,375,244 _1333 B158DRAFT_1334: B158DRAFT_1334 - component of chlorite stress sensing system with PGA1_c21010 (DUF692) (from data), at 1,375,254 to 1,376,039 _1334 B158DRAFT_1335: B158DRAFT_1335 - Surface lipoprotein, at 1,376,128 to 1,376,856 _1335 B158DRAFT_1336: B158DRAFT_1336 - 5'-nucleotidase, at 1,376,892 to 1,377,803 _1336 Position (kb) 1375 1376 1377Strain fitness (log2 ratio) -3 -2 -1 0 1at 1374.313 kb on + strandat 1374.313 kb on + strandat 1374.321 kb on - strandat 1374.321 kb on - strandat 1374.416 kb on + strandat 1374.429 kb on + strandat 1374.438 kb on - strandat 1374.438 kb on - strandat 1374.459 kb on - strandat 1374.461 kb on + strandat 1374.469 kb on - strandat 1374.469 kb on - strandat 1374.548 kb on + strand, within B158DRAFT_1333at 1374.556 kb on - strand, within B158DRAFT_1333at 1374.556 kb on - strand, within B158DRAFT_1333at 1374.556 kb on - strand, within B158DRAFT_1333at 1374.556 kb on - strand, within B158DRAFT_1333at 1374.591 kb on + strand, within B158DRAFT_1333at 1374.593 kb on + strand, within B158DRAFT_1333at 1374.601 kb on - strand, within B158DRAFT_1333at 1374.601 kb on - strand, within B158DRAFT_1333at 1374.607 kb on - strand, within B158DRAFT_1333at 1374.618 kb on + strand, within B158DRAFT_1333at 1374.626 kb on - strand, within B158DRAFT_1333at 1374.626 kb on - strand, within B158DRAFT_1333at 1374.626 kb on - strand, within B158DRAFT_1333at 1374.626 kb on - strand, within B158DRAFT_1333at 1374.675 kb on - strand, within B158DRAFT_1333at 1374.677 kb on + strand, within B158DRAFT_1333at 1374.685 kb on - strand, within B158DRAFT_1333at 1374.685 kb on - strand, within B158DRAFT_1333at 1374.685 kb on - strand, within B158DRAFT_1333at 1374.687 kb on - strand, within B158DRAFT_1333at 1374.729 kb on - strand, within B158DRAFT_1333at 1374.802 kb on - strand, within B158DRAFT_1333at 1374.843 kb on + strand, within B158DRAFT_1333at 1374.851 kb on - strand, within B158DRAFT_1333at 1374.864 kb on + strand, within B158DRAFT_1333at 1374.864 kb on + strand, within B158DRAFT_1333at 1374.936 kb on - strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.956 kb on + strand, within B158DRAFT_1333at 1374.964 kb on - strand, within B158DRAFT_1333at 1374.964 kb on - strand, within B158DRAFT_1333at 1374.964 kb on - strand, within B158DRAFT_1333at 1375.035 kb on + strand, within B158DRAFT_1333at 1375.035 kb on + strand, within B158DRAFT_1333at 1375.043 kb on + strand, within B158DRAFT_1333at 1375.043 kb on - strand, within B158DRAFT_1333at 1375.051 kb on - strand, within B158DRAFT_1333at 1375.051 kb on - strand, within B158DRAFT_1333at 1375.051 kb on - strand, within B158DRAFT_1333at 1375.071 kb on - strand, within B158DRAFT_1333at 1375.075 kb on + strand, within B158DRAFT_1333at 1375.083 kb on + strand, within B158DRAFT_1333at 1375.083 kb on - strand, within B158DRAFT_1333at 1375.124 kb on + strand, within B158DRAFT_1333at 1375.124 kb on + strand, within B158DRAFT_1333at 1375.183 kb on + strandat 1375.193 kb on + strandat 1375.193 kb on + strandat 1375.201 kb on - strandat 1375.201 kb on - strandat 1375.201 kb on - strandat 1375.201 kb on - strandat 1375.239 kb on + strandat 1375.239 kb on + strandat 1375.247 kb on - strandat 1375.247 kb on - strandat 1375.255 kb on - strandat 1375.556 kb on + strand, within B158DRAFT_1334at 1375.566 kb on + strand, within B158DRAFT_1334at 1375.620 kb on - strand, within B158DRAFT_1334at 1375.620 kb on - strand, within B158DRAFT_1334at 1375.620 kb on - strand, within B158DRAFT_1334at 1375.686 kb on + strand, within B158DRAFT_1334at 1375.885 kb on + strand, within B158DRAFT_1334at 1376.003 kb on + strandat 1376.035 kb on - strandat 1376.048 kb on - strandat 1376.126 kb on - strandat 1376.161 kb on + strandat 1376.169 kb on - strandat 1376.195 kb on + strandat 1376.221 kb on + strand, within B158DRAFT_1335at 1376.242 kb on - strand, within B158DRAFT_1335at 1376.283 kb on + strand, within B158DRAFT_1335at 1376.305 kb on + strand, within B158DRAFT_1335at 1376.306 kb on + strand, within B158DRAFT_1335at 1376.306 kb on + strand, within B158DRAFT_1335at 1376.314 kb on - strand, within B158DRAFT_1335at 1376.435 kb on + strand, within B158DRAFT_1335at 1376.435 kb on + strand, within B158DRAFT_1335at 1376.440 kb on + strand, within B158DRAFT_1335at 1376.443 kb on - strand, within B158DRAFT_1335at 1376.448 kb on - strand, within B158DRAFT_1335at 1376.516 kb on + strand, within B158DRAFT_1335at 1376.517 kb on - strand, within B158DRAFT_1335at 1376.594 kb on - strand, within B158DRAFT_1335at 1376.617 kb on + strand, within B158DRAFT_1335at 1376.617 kb on + strand, within B158DRAFT_1335at 1376.625 kb on - strand, within B158DRAFT_1335at 1376.625 kb on - strand, within B158DRAFT_1335at 1376.625 kb on - strand, within B158DRAFT_1335at 1376.630 kb on - strand, within B158DRAFT_1335at 1376.630 kb on - strand, within B158DRAFT_1335at 1376.630 kb on - strand, within B158DRAFT_1335at 1376.664 kb on + strand, within B158DRAFT_1335at 1376.674 kb on - strand, within B158DRAFT_1335at 1376.735 kb on + strand, within B158DRAFT_1335at 1376.762 kb on - strand, within B158DRAFT_1335at 1376.850 kb on + strandat 1376.867 kb on + strandat 1376.918 kb on + strandat 1376.926 kb on - strandat 1376.938 kb on - strandat 1376.995 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on + strand, within B158DRAFT_1336at 1377.032 kb on - strand, within B158DRAFT_1336

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM
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1,374,313 + +0.1
1,374,313 + -0.1
1,374,321 - +0.2
1,374,321 - +0.2
1,374,416 + +0.1
1,374,429 + +0.3
1,374,438 - +0.8
1,374,438 - +0.5
1,374,459 - +0.6
1,374,461 + +0.3
1,374,469 - +0.4
1,374,469 - -0.1
1,374,548 + B158DRAFT_1333 0.18 +0.3
1,374,556 - B158DRAFT_1333 0.19 +0.4
1,374,556 - B158DRAFT_1333 0.19 +0.6
1,374,556 - B158DRAFT_1333 0.19 +0.2
1,374,556 - B158DRAFT_1333 0.19 +0.3
1,374,591 + B158DRAFT_1333 0.23 +0.2
1,374,593 + B158DRAFT_1333 0.23 +0.4
1,374,601 - B158DRAFT_1333 0.24 +0.5
1,374,601 - B158DRAFT_1333 0.24 +0.6
1,374,607 - B158DRAFT_1333 0.25 +0.4
1,374,618 + B158DRAFT_1333 0.26 +1.2
1,374,626 - B158DRAFT_1333 0.27 +0.7
1,374,626 - B158DRAFT_1333 0.27 -0.1
1,374,626 - B158DRAFT_1333 0.27 +0.1
1,374,626 - B158DRAFT_1333 0.27 +0.4
1,374,675 - B158DRAFT_1333 0.33 -0.2
1,374,677 + B158DRAFT_1333 0.33 +0.3
1,374,685 - B158DRAFT_1333 0.34 +0.4
1,374,685 - B158DRAFT_1333 0.34 +0.4
1,374,685 - B158DRAFT_1333 0.34 -0.4
1,374,687 - B158DRAFT_1333 0.34 +0.1
1,374,729 - B158DRAFT_1333 0.39 -0.4
1,374,802 - B158DRAFT_1333 0.48 +0.0
1,374,843 + B158DRAFT_1333 0.52 +0.6
1,374,851 - B158DRAFT_1333 0.53 +0.3
1,374,864 + B158DRAFT_1333 0.55 +0.8
1,374,864 + B158DRAFT_1333 0.55 +0.4
1,374,936 - B158DRAFT_1333 0.63 +0.1
1,374,956 + B158DRAFT_1333 0.66 +0.1
1,374,956 + B158DRAFT_1333 0.66 -0.1
1,374,956 + B158DRAFT_1333 0.66 +0.4
1,374,956 + B158DRAFT_1333 0.66 -0.9
1,374,956 + B158DRAFT_1333 0.66 +0.6
1,374,956 + B158DRAFT_1333 0.66 +0.6
1,374,964 - B158DRAFT_1333 0.67 +0.4
1,374,964 - B158DRAFT_1333 0.67 +0.9
1,374,964 - B158DRAFT_1333 0.67 +0.5
1,375,035 + B158DRAFT_1333 0.75 -2.5
1,375,035 + B158DRAFT_1333 0.75 +0.3
1,375,043 + B158DRAFT_1333 0.76 +0.4
1,375,043 - B158DRAFT_1333 0.76 -0.8
1,375,051 - B158DRAFT_1333 0.77 +0.3
1,375,051 - B158DRAFT_1333 0.77 +1.0
1,375,051 - B158DRAFT_1333 0.77 +0.2
1,375,071 - B158DRAFT_1333 0.79 +0.4
1,375,075 + B158DRAFT_1333 0.80 +0.3
1,375,083 + B158DRAFT_1333 0.81 +1.3
1,375,083 - B158DRAFT_1333 0.81 +0.2
1,375,124 + B158DRAFT_1333 0.86 +0.7
1,375,124 + B158DRAFT_1333 0.86 +0.2
1,375,183 + -0.0
1,375,193 + +0.5
1,375,193 + +0.7
1,375,201 - +0.2
1,375,201 - +1.0
1,375,201 - +0.5
1,375,201 - +0.8
1,375,239 + +0.1
1,375,239 + +0.0
1,375,247 - -0.3
1,375,247 - +0.2
1,375,255 - +0.1
1,375,556 + B158DRAFT_1334 0.38 +0.2
1,375,566 + B158DRAFT_1334 0.40 +0.4
1,375,620 - B158DRAFT_1334 0.47 +0.8
1,375,620 - B158DRAFT_1334 0.47 +0.6
1,375,620 - B158DRAFT_1334 0.47 +0.7
1,375,686 + B158DRAFT_1334 0.55 +0.6
1,375,885 + B158DRAFT_1334 0.80 -0.7
1,376,003 + +0.8
1,376,035 - -0.0
1,376,048 - +0.5
1,376,126 - -0.9
1,376,161 + -0.5
1,376,169 - -2.8
1,376,195 + -0.1
1,376,221 + B158DRAFT_1335 0.13 -1.9
1,376,242 - B158DRAFT_1335 0.16 -0.2
1,376,283 + B158DRAFT_1335 0.21 -2.2
1,376,305 + B158DRAFT_1335 0.24 -2.8
1,376,306 + B158DRAFT_1335 0.24 -0.8
1,376,306 + B158DRAFT_1335 0.24 -1.3
1,376,314 - B158DRAFT_1335 0.26 -0.7
1,376,435 + B158DRAFT_1335 0.42 -0.4
1,376,435 + B158DRAFT_1335 0.42 -1.0
1,376,440 + B158DRAFT_1335 0.43 -0.9
1,376,443 - B158DRAFT_1335 0.43 -1.4
1,376,448 - B158DRAFT_1335 0.44 +0.4
1,376,516 + B158DRAFT_1335 0.53 -1.4
1,376,517 - B158DRAFT_1335 0.53 -2.1
1,376,594 - B158DRAFT_1335 0.64 -2.0
1,376,617 + B158DRAFT_1335 0.67 -0.9
1,376,617 + B158DRAFT_1335 0.67 -1.1
1,376,625 - B158DRAFT_1335 0.68 -0.6
1,376,625 - B158DRAFT_1335 0.68 -1.0
1,376,625 - B158DRAFT_1335 0.68 -1.9
1,376,630 - B158DRAFT_1335 0.69 -0.8
1,376,630 - B158DRAFT_1335 0.69 -0.7
1,376,630 - B158DRAFT_1335 0.69 -1.2
1,376,664 + B158DRAFT_1335 0.74 -1.9
1,376,674 - B158DRAFT_1335 0.75 -2.7
1,376,735 + B158DRAFT_1335 0.83 -0.5
1,376,762 - B158DRAFT_1335 0.87 -2.1
1,376,850 + +0.1
1,376,867 + -0.1
1,376,918 + +0.1
1,376,926 - -0.0
1,376,938 - -0.4
1,376,995 + B158DRAFT_1336 0.11 +0.2
1,377,032 + B158DRAFT_1336 0.15 -0.1
1,377,032 + B158DRAFT_1336 0.15 -0.4
1,377,032 + B158DRAFT_1336 0.15 -0.1
1,377,032 + B158DRAFT_1336 0.15 -0.7
1,377,032 + B158DRAFT_1336 0.15 -0.0
1,377,032 + B158DRAFT_1336 0.15 +0.3
1,377,032 + B158DRAFT_1336 0.15 -0.2
1,377,032 + B158DRAFT_1336 0.15 -0.2
1,377,032 + B158DRAFT_1336 0.15 +0.8
1,377,032 - B158DRAFT_1336 0.15 -0.1

Or see this region's nucleotide sequence