Experiment: m.b. Choline chloride 15 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1328 and B158DRAFT_1329 overlap by 11 nucleotides B158DRAFT_1329 and B158DRAFT_1330 overlap by 4 nucleotides B158DRAFT_1330 and B158DRAFT_1331 are separated by 3 nucleotides
B158DRAFT_1328: B158DRAFT_1328 - c-type cytochrome biogenesis protein CcmF, at 1,369,794 to 1,371,782
_1328
B158DRAFT_1329: B158DRAFT_1329 - periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily, at 1,371,772 to 1,372,338
_1329
B158DRAFT_1330: B158DRAFT_1330 - Uncharacterized protein involved in biosynthesis of c-type cytochromes, at 1,372,335 to 1,372,769
_1330
B158DRAFT_1331: B158DRAFT_1331 - Cytochrome c biogenesis factor, at 1,372,773 to 1,373,798
_1331
Position (kb)
1372
1373 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 1371.501 kb on + strand, within B158DRAFT_1328 at 1371.510 kb on + strand, within B158DRAFT_1328 at 1371.511 kb on - strand, within B158DRAFT_1328 at 1371.587 kb on + strand at 1371.661 kb on + strand at 1371.797 kb on + strand at 1371.805 kb on - strand at 1371.828 kb on + strand at 1371.924 kb on + strand, within B158DRAFT_1329 at 1371.931 kb on + strand, within B158DRAFT_1329 at 1371.949 kb on + strand, within B158DRAFT_1329 at 1371.957 kb on - strand, within B158DRAFT_1329 at 1371.957 kb on - strand, within B158DRAFT_1329 at 1372.163 kb on - strand, within B158DRAFT_1329 at 1372.191 kb on - strand, within B158DRAFT_1329 at 1372.350 kb on + strand at 1372.603 kb on + strand, within B158DRAFT_1330 at 1372.611 kb on - strand, within B158DRAFT_1330 at 1372.723 kb on + strand, within B158DRAFT_1330 at 1372.767 kb on - strand at 1372.796 kb on - strand at 1372.808 kb on + strand at 1372.816 kb on - strand at 1372.816 kb on - strand at 1372.951 kb on + strand, within B158DRAFT_1331 at 1373.100 kb on + strand, within B158DRAFT_1331 at 1373.108 kb on - strand, within B158DRAFT_1331 at 1373.134 kb on + strand, within B158DRAFT_1331 at 1373.164 kb on + strand, within B158DRAFT_1331 at 1373.259 kb on + strand, within B158DRAFT_1331 at 1373.269 kb on + strand, within B158DRAFT_1331 at 1373.279 kb on + strand, within B158DRAFT_1331 at 1373.319 kb on - strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.405 kb on + strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.413 kb on - strand, within B158DRAFT_1331 at 1373.437 kb on - strand, within B158DRAFT_1331 at 1373.520 kb on + strand, within B158DRAFT_1331 at 1373.537 kb on + strand, within B158DRAFT_1331 at 1373.542 kb on + strand, within B158DRAFT_1331 at 1373.552 kb on + strand, within B158DRAFT_1331 at 1373.572 kb on + strand, within B158DRAFT_1331 at 1373.572 kb on + strand, within B158DRAFT_1331 at 1373.588 kb on + strand, within B158DRAFT_1331 at 1373.596 kb on - strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.611 kb on + strand, within B158DRAFT_1331 at 1373.622 kb on - strand, within B158DRAFT_1331 at 1373.634 kb on + strand, within B158DRAFT_1331 at 1373.675 kb on - strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.692 kb on + strand, within B158DRAFT_1331 at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.700 kb on - strand at 1373.702 kb on + strand at 1373.715 kb on - strand at 1373.755 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM remove 1,371,501 + B158DRAFT_1328 0.86 +1.2 1,371,510 + B158DRAFT_1328 0.86 +1.2 1,371,511 - B158DRAFT_1328 0.86 +1.2 1,371,587 + +1.2 1,371,661 + +0.7 1,371,797 + +2.0 1,371,805 - +1.7 1,371,828 + +1.8 1,371,924 + B158DRAFT_1329 0.27 +0.4 1,371,931 + B158DRAFT_1329 0.28 +2.1 1,371,949 + B158DRAFT_1329 0.31 +1.9 1,371,957 - B158DRAFT_1329 0.33 +1.5 1,371,957 - B158DRAFT_1329 0.33 +1.1 1,372,163 - B158DRAFT_1329 0.69 +1.9 1,372,191 - B158DRAFT_1329 0.74 +1.2 1,372,350 + +1.7 1,372,603 + B158DRAFT_1330 0.62 +1.9 1,372,611 - B158DRAFT_1330 0.63 +1.8 1,372,723 + B158DRAFT_1330 0.89 +3.8 1,372,767 - +3.0 1,372,796 - +2.3 1,372,808 + +3.3 1,372,816 - +2.8 1,372,816 - +1.7 1,372,951 + B158DRAFT_1331 0.17 +2.4 1,373,100 + B158DRAFT_1331 0.32 +3.2 1,373,108 - B158DRAFT_1331 0.33 +1.7 1,373,134 + B158DRAFT_1331 0.35 +1.3 1,373,164 + B158DRAFT_1331 0.38 +2.3 1,373,259 + B158DRAFT_1331 0.47 +1.1 1,373,269 + B158DRAFT_1331 0.48 +2.5 1,373,279 + B158DRAFT_1331 0.49 +1.7 1,373,319 - B158DRAFT_1331 0.53 +2.2 1,373,405 + B158DRAFT_1331 0.62 +2.8 1,373,405 + B158DRAFT_1331 0.62 +2.6 1,373,405 + B158DRAFT_1331 0.62 +2.9 1,373,405 + B158DRAFT_1331 0.62 +2.9 1,373,413 - B158DRAFT_1331 0.62 +2.5 1,373,413 - B158DRAFT_1331 0.62 +1.6 1,373,413 - B158DRAFT_1331 0.62 +2.9 1,373,413 - B158DRAFT_1331 0.62 +3.1 1,373,413 - B158DRAFT_1331 0.62 +2.8 1,373,437 - B158DRAFT_1331 0.65 +3.2 1,373,520 + B158DRAFT_1331 0.73 +2.5 1,373,537 + B158DRAFT_1331 0.74 +2.7 1,373,542 + B158DRAFT_1331 0.75 +3.0 1,373,552 + B158DRAFT_1331 0.76 +3.0 1,373,572 + B158DRAFT_1331 0.78 +3.1 1,373,572 + B158DRAFT_1331 0.78 +3.1 1,373,588 + B158DRAFT_1331 0.79 +3.2 1,373,596 - B158DRAFT_1331 0.80 +3.1 1,373,611 + B158DRAFT_1331 0.82 +3.0 1,373,611 + B158DRAFT_1331 0.82 +3.1 1,373,611 + B158DRAFT_1331 0.82 +3.1 1,373,622 - B158DRAFT_1331 0.83 +2.7 1,373,634 + B158DRAFT_1331 0.84 +3.1 1,373,675 - B158DRAFT_1331 0.88 +2.9 1,373,692 + B158DRAFT_1331 0.90 +3.1 1,373,692 + B158DRAFT_1331 0.90 +3.0 1,373,692 + B158DRAFT_1331 0.90 +3.2 1,373,692 + B158DRAFT_1331 0.90 +2.8 1,373,700 - +2.7 1,373,700 - +3.4 1,373,700 - +3.1 1,373,700 - +3.0 1,373,702 + +2.9 1,373,715 - +2.8 1,373,755 - +3.1
Or see this region's nucleotide sequence