Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0824

Experiment: m.b. Choline chloride 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0823 and B158DRAFT_0824 are separated by 58 nucleotidesB158DRAFT_0824 and B158DRAFT_0825 are separated by 196 nucleotides B158DRAFT_0823: B158DRAFT_0823 - putative glycoprotease GCP, at 834,736 to 835,758 _0823 B158DRAFT_0824: B158DRAFT_0824 - hypothetical protein, at 835,817 to 836,158 _0824 B158DRAFT_0825: B158DRAFT_0825 - Periplasmic protease, at 836,355 to 837,632 _0825 Position (kb) 835 836 837Strain fitness (log2 ratio) -2 -1 0 1 2at 835.747 kb on + strandat 835.773 kb on + strandat 835.781 kb on - strandat 835.789 kb on + strandat 835.791 kb on - strandat 835.797 kb on - strandat 835.807 kb on - strandat 835.824 kb on - strandat 835.852 kb on + strand, within B158DRAFT_0824at 835.857 kb on - strand, within B158DRAFT_0824at 835.877 kb on + strand, within B158DRAFT_0824at 835.877 kb on + strand, within B158DRAFT_0824at 835.877 kb on + strand, within B158DRAFT_0824at 835.885 kb on - strand, within B158DRAFT_0824at 835.919 kb on - strand, within B158DRAFT_0824at 835.919 kb on - strand, within B158DRAFT_0824at 835.920 kb on - strand, within B158DRAFT_0824at 835.966 kb on - strand, within B158DRAFT_0824at 835.977 kb on - strand, within B158DRAFT_0824at 835.977 kb on - strand, within B158DRAFT_0824at 835.990 kb on + strand, within B158DRAFT_0824at 835.998 kb on - strand, within B158DRAFT_0824at 836.012 kb on - strand, within B158DRAFT_0824at 836.016 kb on + strand, within B158DRAFT_0824at 836.016 kb on + strand, within B158DRAFT_0824at 836.034 kb on - strand, within B158DRAFT_0824at 836.058 kb on + strand, within B158DRAFT_0824at 836.063 kb on + strand, within B158DRAFT_0824at 836.071 kb on - strand, within B158DRAFT_0824at 836.285 kb on - strandat 836.320 kb on + strandat 836.320 kb on + strandat 836.320 kb on + strandat 836.320 kb on + strandat 836.353 kb on + strandat 836.361 kb on - strandat 836.361 kb on - strandat 836.388 kb on + strandat 836.408 kb on + strandat 836.409 kb on + strandat 836.416 kb on + strandat 836.417 kb on - strandat 836.441 kb on - strandat 836.441 kb on - strandat 836.441 kb on - strandat 836.503 kb on - strand, within B158DRAFT_0825at 836.523 kb on + strand, within B158DRAFT_0825at 836.532 kb on - strand, within B158DRAFT_0825at 836.534 kb on + strand, within B158DRAFT_0825at 836.547 kb on - strand, within B158DRAFT_0825at 836.575 kb on + strand, within B158DRAFT_0825at 836.575 kb on + strand, within B158DRAFT_0825at 836.575 kb on + strand, within B158DRAFT_0825at 836.575 kb on + strand, within B158DRAFT_0825at 836.575 kb on + strand, within B158DRAFT_0825at 836.575 kb on + strand, within B158DRAFT_0825at 836.575 kb on + strand, within B158DRAFT_0825at 836.582 kb on + strand, within B158DRAFT_0825at 836.583 kb on - strand, within B158DRAFT_0825at 836.583 kb on - strand, within B158DRAFT_0825at 836.590 kb on - strand, within B158DRAFT_0825at 836.590 kb on - strand, within B158DRAFT_0825at 836.590 kb on - strand, within B158DRAFT_0825at 836.614 kb on - strand, within B158DRAFT_0825at 836.746 kb on - strand, within B158DRAFT_0825at 836.787 kb on + strand, within B158DRAFT_0825at 836.800 kb on + strand, within B158DRAFT_0825at 836.800 kb on + strand, within B158DRAFT_0825at 836.808 kb on - strand, within B158DRAFT_0825at 836.823 kb on + strand, within B158DRAFT_0825at 836.914 kb on + strand, within B158DRAFT_0825at 836.914 kb on + strand, within B158DRAFT_0825at 836.922 kb on - strand, within B158DRAFT_0825at 836.922 kb on - strand, within B158DRAFT_0825at 836.922 kb on - strand, within B158DRAFT_0825at 836.922 kb on - strand, within B158DRAFT_0825at 836.952 kb on - strand, within B158DRAFT_0825at 836.981 kb on + strand, within B158DRAFT_0825at 836.981 kb on + strand, within B158DRAFT_0825at 837.067 kb on - strand, within B158DRAFT_0825at 837.077 kb on - strand, within B158DRAFT_0825at 837.085 kb on + strand, within B158DRAFT_0825at 837.085 kb on + strand, within B158DRAFT_0825at 837.093 kb on - strand, within B158DRAFT_0825at 837.095 kb on + strand, within B158DRAFT_0825at 837.111 kb on - strand, within B158DRAFT_0825at 837.111 kb on - strand, within B158DRAFT_0825

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM
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835,747 + -0.2
835,773 + -0.0
835,781 - -0.6
835,789 + -0.5
835,791 - -0.4
835,797 - -0.5
835,807 - -0.1
835,824 - -0.9
835,852 + B158DRAFT_0824 0.10 -0.5
835,857 - B158DRAFT_0824 0.12 -0.1
835,877 + B158DRAFT_0824 0.18 -0.1
835,877 + B158DRAFT_0824 0.18 -0.3
835,877 + B158DRAFT_0824 0.18 -0.6
835,885 - B158DRAFT_0824 0.20 +0.2
835,919 - B158DRAFT_0824 0.30 -0.4
835,919 - B158DRAFT_0824 0.30 -0.2
835,920 - B158DRAFT_0824 0.30 -0.2
835,966 - B158DRAFT_0824 0.44 -0.0
835,977 - B158DRAFT_0824 0.47 +0.0
835,977 - B158DRAFT_0824 0.47 -0.3
835,990 + B158DRAFT_0824 0.51 +0.0
835,998 - B158DRAFT_0824 0.53 -0.0
836,012 - B158DRAFT_0824 0.57 +0.6
836,016 + B158DRAFT_0824 0.58 +0.9
836,016 + B158DRAFT_0824 0.58 +0.0
836,034 - B158DRAFT_0824 0.63 +0.2
836,058 + B158DRAFT_0824 0.70 -0.4
836,063 + B158DRAFT_0824 0.72 -0.4
836,071 - B158DRAFT_0824 0.74 +0.3
836,285 - -0.2
836,320 + +0.2
836,320 + +1.8
836,320 + +0.1
836,320 + -0.3
836,353 + +0.3
836,361 - -0.5
836,361 - -1.8
836,388 + +0.2
836,408 + +0.2
836,409 + -0.1
836,416 + -0.4
836,417 - -0.1
836,441 - -0.3
836,441 - -0.2
836,441 - -0.3
836,503 - B158DRAFT_0825 0.12 -0.2
836,523 + B158DRAFT_0825 0.13 -0.4
836,532 - B158DRAFT_0825 0.14 -0.3
836,534 + B158DRAFT_0825 0.14 -0.1
836,547 - B158DRAFT_0825 0.15 -0.4
836,575 + B158DRAFT_0825 0.17 -0.4
836,575 + B158DRAFT_0825 0.17 -0.8
836,575 + B158DRAFT_0825 0.17 -0.3
836,575 + B158DRAFT_0825 0.17 -0.1
836,575 + B158DRAFT_0825 0.17 +0.3
836,575 + B158DRAFT_0825 0.17 +0.9
836,575 + B158DRAFT_0825 0.17 -0.2
836,582 + B158DRAFT_0825 0.18 +0.4
836,583 - B158DRAFT_0825 0.18 +0.7
836,583 - B158DRAFT_0825 0.18 -0.3
836,590 - B158DRAFT_0825 0.18 -0.4
836,590 - B158DRAFT_0825 0.18 +0.8
836,590 - B158DRAFT_0825 0.18 +0.2
836,614 - B158DRAFT_0825 0.20 -0.4
836,746 - B158DRAFT_0825 0.31 -1.0
836,787 + B158DRAFT_0825 0.34 -0.8
836,800 + B158DRAFT_0825 0.35 -0.0
836,800 + B158DRAFT_0825 0.35 -0.0
836,808 - B158DRAFT_0825 0.35 +0.1
836,823 + B158DRAFT_0825 0.37 -0.9
836,914 + B158DRAFT_0825 0.44 -0.2
836,914 + B158DRAFT_0825 0.44 +0.2
836,922 - B158DRAFT_0825 0.44 -0.2
836,922 - B158DRAFT_0825 0.44 -2.0
836,922 - B158DRAFT_0825 0.44 +0.0
836,922 - B158DRAFT_0825 0.44 -0.2
836,952 - B158DRAFT_0825 0.47 -0.2
836,981 + B158DRAFT_0825 0.49 +0.0
836,981 + B158DRAFT_0825 0.49 -0.2
837,067 - B158DRAFT_0825 0.56 -0.5
837,077 - B158DRAFT_0825 0.56 +0.1
837,085 + B158DRAFT_0825 0.57 -0.0
837,085 + B158DRAFT_0825 0.57 -0.3
837,093 - B158DRAFT_0825 0.58 +0.2
837,095 + B158DRAFT_0825 0.58 +0.2
837,111 - B158DRAFT_0825 0.59 +0.4
837,111 - B158DRAFT_0825 0.59 -0.2

Or see this region's nucleotide sequence