Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0485

Experiment: m.b. Choline chloride 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0483 and B158DRAFT_0484 are separated by 34 nucleotidesB158DRAFT_0484 and B158DRAFT_0485 are separated by 79 nucleotidesB158DRAFT_0485 and B158DRAFT_0486 are separated by 0 nucleotides B158DRAFT_0483: B158DRAFT_0483 - hypothetical protein, at 485,400 to 485,768 _0483 B158DRAFT_0484: B158DRAFT_0484 - Protein of unknown function (DUF3478)., at 485,803 to 486,171 _0484 B158DRAFT_0485: B158DRAFT_0485 - Periplasmic protease, at 486,251 to 486,607 _0485 B158DRAFT_0486: B158DRAFT_0486 - iron-sulfur cluster binding protein, putative, at 486,608 to 487,756 _0486 Position (kb) 486 487Strain fitness (log2 ratio) -2 -1 0 1at 485.305 kb on - strandat 485.394 kb on + strandat 485.495 kb on - strand, within B158DRAFT_0483at 485.526 kb on - strand, within B158DRAFT_0483at 485.533 kb on + strand, within B158DRAFT_0483at 485.536 kb on - strand, within B158DRAFT_0483at 485.572 kb on - strand, within B158DRAFT_0483at 485.599 kb on - strand, within B158DRAFT_0483at 485.693 kb on - strand, within B158DRAFT_0483at 485.801 kb on - strandat 486.018 kb on + strand, within B158DRAFT_0484at 486.018 kb on + strand, within B158DRAFT_0484at 486.018 kb on + strand, within B158DRAFT_0484at 486.026 kb on - strand, within B158DRAFT_0484at 486.386 kb on + strand, within B158DRAFT_0485at 486.386 kb on + strand, within B158DRAFT_0485at 486.431 kb on - strand, within B158DRAFT_0485at 486.443 kb on - strand, within B158DRAFT_0485at 486.477 kb on + strand, within B158DRAFT_0485at 486.499 kb on - strand, within B158DRAFT_0485at 486.558 kb on - strand, within B158DRAFT_0485at 486.762 kb on + strand, within B158DRAFT_0486at 486.855 kb on + strand, within B158DRAFT_0486at 486.889 kb on - strand, within B158DRAFT_0486at 486.889 kb on - strand, within B158DRAFT_0486at 486.897 kb on - strand, within B158DRAFT_0486at 486.902 kb on - strand, within B158DRAFT_0486at 486.926 kb on - strand, within B158DRAFT_0486at 486.926 kb on - strand, within B158DRAFT_0486at 486.984 kb on + strand, within B158DRAFT_0486at 487.044 kb on - strand, within B158DRAFT_0486at 487.141 kb on + strand, within B158DRAFT_0486at 487.141 kb on + strand, within B158DRAFT_0486at 487.149 kb on - strand, within B158DRAFT_0486at 487.173 kb on + strand, within B158DRAFT_0486at 487.181 kb on - strand, within B158DRAFT_0486at 487.265 kb on + strand, within B158DRAFT_0486at 487.285 kb on + strand, within B158DRAFT_0486at 487.376 kb on + strand, within B158DRAFT_0486at 487.433 kb on + strand, within B158DRAFT_0486at 487.541 kb on - strand, within B158DRAFT_0486

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM
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485,305 - +0.6
485,394 + -0.4
485,495 - B158DRAFT_0483 0.26 -0.1
485,526 - B158DRAFT_0483 0.34 -0.2
485,533 + B158DRAFT_0483 0.36 +0.1
485,536 - B158DRAFT_0483 0.37 -0.2
485,572 - B158DRAFT_0483 0.47 -0.4
485,599 - B158DRAFT_0483 0.54 -0.1
485,693 - B158DRAFT_0483 0.79 +0.0
485,801 - -0.1
486,018 + B158DRAFT_0484 0.58 -0.1
486,018 + B158DRAFT_0484 0.58 -0.8
486,018 + B158DRAFT_0484 0.58 -0.8
486,026 - B158DRAFT_0484 0.60 +0.3
486,386 + B158DRAFT_0485 0.38 -0.0
486,386 + B158DRAFT_0485 0.38 -0.5
486,431 - B158DRAFT_0485 0.50 +0.4
486,443 - B158DRAFT_0485 0.54 -0.5
486,477 + B158DRAFT_0485 0.63 -0.1
486,499 - B158DRAFT_0485 0.69 +0.0
486,558 - B158DRAFT_0485 0.86 -0.4
486,762 + B158DRAFT_0486 0.13 -1.1
486,855 + B158DRAFT_0486 0.21 -0.1
486,889 - B158DRAFT_0486 0.24 +0.1
486,889 - B158DRAFT_0486 0.24 -0.3
486,897 - B158DRAFT_0486 0.25 -0.7
486,902 - B158DRAFT_0486 0.26 +0.2
486,926 - B158DRAFT_0486 0.28 -0.4
486,926 - B158DRAFT_0486 0.28 -2.2
486,984 + B158DRAFT_0486 0.33 -0.7
487,044 - B158DRAFT_0486 0.38 -0.3
487,141 + B158DRAFT_0486 0.46 -0.3
487,141 + B158DRAFT_0486 0.46 -0.6
487,149 - B158DRAFT_0486 0.47 -0.8
487,173 + B158DRAFT_0486 0.49 -0.8
487,181 - B158DRAFT_0486 0.50 -0.1
487,265 + B158DRAFT_0486 0.57 -0.1
487,285 + B158DRAFT_0486 0.59 -1.1
487,376 + B158DRAFT_0486 0.67 -0.4
487,433 + B158DRAFT_0486 0.72 -0.3
487,541 - B158DRAFT_0486 0.81 -0.9

Or see this region's nucleotide sequence