Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0428

Experiment: m.b. Choline chloride 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0426 and B158DRAFT_0427 overlap by 14 nucleotidesB158DRAFT_0427 and B158DRAFT_0428 are separated by 1 nucleotidesB158DRAFT_0428 and B158DRAFT_0429 overlap by 14 nucleotides B158DRAFT_0426: B158DRAFT_0426 - Outer membrane lipoprotein carrier protein LolA., at 430,408 to 431,040 _0426 B158DRAFT_0427: B158DRAFT_0427 - Predicted thioesterase, at 431,027 to 431,470 _0427 B158DRAFT_0428: B158DRAFT_0428 - Histidine ammonia-lyase, at 431,472 to 433,016 _0428 B158DRAFT_0429: B158DRAFT_0429 - Predicted acyltransferase, at 433,003 to 434,736 _0429 Position (kb) 431 432 433 434Strain fitness (log2 ratio) -2 -1 0 1 2at 430.497 kb on + strand, within B158DRAFT_0426at 430.574 kb on - strand, within B158DRAFT_0426at 430.591 kb on + strand, within B158DRAFT_0426at 430.612 kb on + strand, within B158DRAFT_0426at 430.612 kb on + strand, within B158DRAFT_0426at 430.612 kb on + strand, within B158DRAFT_0426at 430.612 kb on + strand, within B158DRAFT_0426at 430.612 kb on + strand, within B158DRAFT_0426at 430.612 kb on + strand, within B158DRAFT_0426at 430.620 kb on - strand, within B158DRAFT_0426at 430.620 kb on - strand, within B158DRAFT_0426at 430.620 kb on - strand, within B158DRAFT_0426at 430.620 kb on - strand, within B158DRAFT_0426at 430.752 kb on + strand, within B158DRAFT_0426at 430.752 kb on + strand, within B158DRAFT_0426at 430.760 kb on - strand, within B158DRAFT_0426at 430.844 kb on + strand, within B158DRAFT_0426at 430.923 kb on + strand, within B158DRAFT_0426at 430.923 kb on + strand, within B158DRAFT_0426at 430.951 kb on + strand, within B158DRAFT_0426at 430.959 kb on - strand, within B158DRAFT_0426at 430.959 kb on - strand, within B158DRAFT_0426at 431.037 kb on + strandat 431.106 kb on + strand, within B158DRAFT_0427at 431.130 kb on + strand, within B158DRAFT_0427at 431.130 kb on + strand, within B158DRAFT_0427at 431.138 kb on - strand, within B158DRAFT_0427at 431.138 kb on - strand, within B158DRAFT_0427at 431.141 kb on + strand, within B158DRAFT_0427at 431.149 kb on - strand, within B158DRAFT_0427at 431.159 kb on - strand, within B158DRAFT_0427at 431.208 kb on - strand, within B158DRAFT_0427at 431.208 kb on - strand, within B158DRAFT_0427at 431.208 kb on - strand, within B158DRAFT_0427at 431.303 kb on - strand, within B158DRAFT_0427at 431.333 kb on - strand, within B158DRAFT_0427at 431.335 kb on + strand, within B158DRAFT_0427at 431.350 kb on + strand, within B158DRAFT_0427at 431.357 kb on + strand, within B158DRAFT_0427at 431.357 kb on + strand, within B158DRAFT_0427at 431.357 kb on + strand, within B158DRAFT_0427at 431.365 kb on - strand, within B158DRAFT_0427at 431.367 kb on - strand, within B158DRAFT_0427at 431.421 kb on + strand, within B158DRAFT_0427at 431.428 kb on + strandat 431.428 kb on + strandat 431.436 kb on - strandat 431.436 kb on - strandat 431.436 kb on - strandat 431.449 kb on + strandat 431.476 kb on - strandat 431.482 kb on + strandat 431.545 kb on + strandat 431.545 kb on + strandat 431.549 kb on - strandat 431.549 kb on - strandat 431.553 kb on - strandat 431.553 kb on - strandat 431.553 kb on - strandat 431.553 kb on - strandat 431.614 kb on - strandat 431.640 kb on + strand, within B158DRAFT_0428at 431.640 kb on + strand, within B158DRAFT_0428at 431.640 kb on + strand, within B158DRAFT_0428at 431.648 kb on - strand, within B158DRAFT_0428at 431.751 kb on - strand, within B158DRAFT_0428at 431.810 kb on + strand, within B158DRAFT_0428at 431.816 kb on - strand, within B158DRAFT_0428at 431.818 kb on - strand, within B158DRAFT_0428at 431.843 kb on - strand, within B158DRAFT_0428at 431.845 kb on + strand, within B158DRAFT_0428at 431.853 kb on - strand, within B158DRAFT_0428at 431.853 kb on - strand, within B158DRAFT_0428at 431.906 kb on + strand, within B158DRAFT_0428at 431.965 kb on + strand, within B158DRAFT_0428at 431.973 kb on - strand, within B158DRAFT_0428at 431.973 kb on - strand, within B158DRAFT_0428at 432.050 kb on - strand, within B158DRAFT_0428at 432.055 kb on - strand, within B158DRAFT_0428at 432.092 kb on - strand, within B158DRAFT_0428at 432.107 kb on + strand, within B158DRAFT_0428at 432.107 kb on + strand, within B158DRAFT_0428at 432.115 kb on - strand, within B158DRAFT_0428at 432.139 kb on + strand, within B158DRAFT_0428at 432.228 kb on + strand, within B158DRAFT_0428at 432.256 kb on + strand, within B158DRAFT_0428at 432.256 kb on + strand, within B158DRAFT_0428at 432.264 kb on - strand, within B158DRAFT_0428at 432.264 kb on - strand, within B158DRAFT_0428at 432.264 kb on - strand, within B158DRAFT_0428at 432.264 kb on - strand, within B158DRAFT_0428at 432.264 kb on - strand, within B158DRAFT_0428at 432.264 kb on - strand, within B158DRAFT_0428at 432.298 kb on + strand, within B158DRAFT_0428at 432.298 kb on + strand, within B158DRAFT_0428at 432.306 kb on - strand, within B158DRAFT_0428at 432.308 kb on - strand, within B158DRAFT_0428at 432.319 kb on - strand, within B158DRAFT_0428at 432.369 kb on + strand, within B158DRAFT_0428at 432.369 kb on + strand, within B158DRAFT_0428at 432.369 kb on + strand, within B158DRAFT_0428at 432.369 kb on + strand, within B158DRAFT_0428at 432.382 kb on - strand, within B158DRAFT_0428at 432.384 kb on + strand, within B158DRAFT_0428at 432.384 kb on + strand, within B158DRAFT_0428at 432.384 kb on + strand, within B158DRAFT_0428at 432.392 kb on - strand, within B158DRAFT_0428at 432.392 kb on - strand, within B158DRAFT_0428at 432.447 kb on + strand, within B158DRAFT_0428at 432.482 kb on + strand, within B158DRAFT_0428at 432.482 kb on + strand, within B158DRAFT_0428at 432.487 kb on + strand, within B158DRAFT_0428at 432.501 kb on + strand, within B158DRAFT_0428at 432.529 kb on - strand, within B158DRAFT_0428at 432.530 kb on + strand, within B158DRAFT_0428at 432.533 kb on - strand, within B158DRAFT_0428at 432.533 kb on - strand, within B158DRAFT_0428at 432.541 kb on + strand, within B158DRAFT_0428at 432.554 kb on + strand, within B158DRAFT_0428at 432.565 kb on + strand, within B158DRAFT_0428at 432.573 kb on - strand, within B158DRAFT_0428at 432.587 kb on + strand, within B158DRAFT_0428at 432.587 kb on + strand, within B158DRAFT_0428at 432.595 kb on - strand, within B158DRAFT_0428at 432.602 kb on + strand, within B158DRAFT_0428at 432.610 kb on - strand, within B158DRAFT_0428at 432.644 kb on - strand, within B158DRAFT_0428at 432.679 kb on - strand, within B158DRAFT_0428at 432.681 kb on + strand, within B158DRAFT_0428at 432.693 kb on + strand, within B158DRAFT_0428at 432.716 kb on - strand, within B158DRAFT_0428at 432.737 kb on + strand, within B158DRAFT_0428at 432.737 kb on + strand, within B158DRAFT_0428at 432.737 kb on + strand, within B158DRAFT_0428at 432.745 kb on - strand, within B158DRAFT_0428at 432.745 kb on - strand, within B158DRAFT_0428at 432.754 kb on - strand, within B158DRAFT_0428at 432.761 kb on + strand, within B158DRAFT_0428at 432.816 kb on + strand, within B158DRAFT_0428at 432.816 kb on + strand, within B158DRAFT_0428at 432.824 kb on - strand, within B158DRAFT_0428at 432.842 kb on - strand, within B158DRAFT_0428at 432.887 kb on + strandat 432.895 kb on - strandat 432.947 kb on - strandat 433.043 kb on + strandat 433.048 kb on + strandat 433.048 kb on + strandat 433.048 kb on + strandat 433.061 kb on - strandat 433.061 kb on - strandat 433.128 kb on + strandat 433.136 kb on - strandat 433.194 kb on + strand, within B158DRAFT_0429at 433.202 kb on - strand, within B158DRAFT_0429at 433.212 kb on - strand, within B158DRAFT_0429at 433.223 kb on - strand, within B158DRAFT_0429at 433.245 kb on + strand, within B158DRAFT_0429at 433.245 kb on + strand, within B158DRAFT_0429at 433.245 kb on + strand, within B158DRAFT_0429at 433.245 kb on + strand, within B158DRAFT_0429at 433.245 kb on + strand, within B158DRAFT_0429at 433.245 kb on + strand, within B158DRAFT_0429at 433.253 kb on - strand, within B158DRAFT_0429at 433.253 kb on - strand, within B158DRAFT_0429at 433.253 kb on - strand, within B158DRAFT_0429at 433.253 kb on - strand, within B158DRAFT_0429at 433.293 kb on + strand, within B158DRAFT_0429at 433.293 kb on + strand, within B158DRAFT_0429at 433.294 kb on + strand, within B158DRAFT_0429at 433.294 kb on + strand, within B158DRAFT_0429at 433.294 kb on + strand, within B158DRAFT_0429at 433.294 kb on + strand, within B158DRAFT_0429at 433.301 kb on - strand, within B158DRAFT_0429at 433.302 kb on - strand, within B158DRAFT_0429at 433.302 kb on - strand, within B158DRAFT_0429at 433.302 kb on - strand, within B158DRAFT_0429at 433.302 kb on - strand, within B158DRAFT_0429at 433.302 kb on - strand, within B158DRAFT_0429at 433.362 kb on + strand, within B158DRAFT_0429at 433.443 kb on + strand, within B158DRAFT_0429at 433.451 kb on + strand, within B158DRAFT_0429at 433.467 kb on + strand, within B158DRAFT_0429at 433.478 kb on + strand, within B158DRAFT_0429at 433.551 kb on + strand, within B158DRAFT_0429at 433.567 kb on - strand, within B158DRAFT_0429at 433.585 kb on - strand, within B158DRAFT_0429at 433.585 kb on - strand, within B158DRAFT_0429at 433.587 kb on + strand, within B158DRAFT_0429at 433.615 kb on + strand, within B158DRAFT_0429at 433.617 kb on + strand, within B158DRAFT_0429at 433.618 kb on - strand, within B158DRAFT_0429at 433.618 kb on - strand, within B158DRAFT_0429at 433.693 kb on + strand, within B158DRAFT_0429at 433.772 kb on - strand, within B158DRAFT_0429at 433.793 kb on + strand, within B158DRAFT_0429at 433.793 kb on + strand, within B158DRAFT_0429at 433.824 kb on + strand, within B158DRAFT_0429at 433.922 kb on + strand, within B158DRAFT_0429at 433.930 kb on - strand, within B158DRAFT_0429at 433.930 kb on - strand, within B158DRAFT_0429at 433.930 kb on - strand, within B158DRAFT_0429at 433.930 kb on - strand, within B158DRAFT_0429at 433.947 kb on + strand, within B158DRAFT_0429at 433.983 kb on - strand, within B158DRAFT_0429

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM
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430,497 + B158DRAFT_0426 0.14 -2.1
430,574 - B158DRAFT_0426 0.26 +2.0
430,591 + B158DRAFT_0426 0.29 -0.9
430,612 + B158DRAFT_0426 0.32 -1.0
430,612 + B158DRAFT_0426 0.32 -0.9
430,612 + B158DRAFT_0426 0.32 -0.6
430,612 + B158DRAFT_0426 0.32 -0.5
430,612 + B158DRAFT_0426 0.32 -0.3
430,612 + B158DRAFT_0426 0.32 -0.2
430,620 - B158DRAFT_0426 0.33 +0.3
430,620 - B158DRAFT_0426 0.33 -0.2
430,620 - B158DRAFT_0426 0.33 -0.4
430,620 - B158DRAFT_0426 0.33 -0.9
430,752 + B158DRAFT_0426 0.54 -0.4
430,752 + B158DRAFT_0426 0.54 -0.9
430,760 - B158DRAFT_0426 0.56 -1.5
430,844 + B158DRAFT_0426 0.69 -0.4
430,923 + B158DRAFT_0426 0.81 -0.7
430,923 + B158DRAFT_0426 0.81 -0.6
430,951 + B158DRAFT_0426 0.86 -1.0
430,959 - B158DRAFT_0426 0.87 -0.2
430,959 - B158DRAFT_0426 0.87 -0.7
431,037 + -0.4
431,106 + B158DRAFT_0427 0.18 -0.5
431,130 + B158DRAFT_0427 0.23 -0.7
431,130 + B158DRAFT_0427 0.23 -0.6
431,138 - B158DRAFT_0427 0.25 -0.5
431,138 - B158DRAFT_0427 0.25 -0.4
431,141 + B158DRAFT_0427 0.26 +0.1
431,149 - B158DRAFT_0427 0.27 +0.0
431,159 - B158DRAFT_0427 0.30 -0.4
431,208 - B158DRAFT_0427 0.41 -0.6
431,208 - B158DRAFT_0427 0.41 +0.2
431,208 - B158DRAFT_0427 0.41 -0.2
431,303 - B158DRAFT_0427 0.62 -0.3
431,333 - B158DRAFT_0427 0.69 -0.1
431,335 + B158DRAFT_0427 0.69 -0.1
431,350 + B158DRAFT_0427 0.73 -0.5
431,357 + B158DRAFT_0427 0.74 -0.5
431,357 + B158DRAFT_0427 0.74 -1.7
431,357 + B158DRAFT_0427 0.74 -0.4
431,365 - B158DRAFT_0427 0.76 -0.7
431,367 - B158DRAFT_0427 0.77 +0.1
431,421 + B158DRAFT_0427 0.89 -0.2
431,428 + -0.2
431,428 + -0.2
431,436 - -0.3
431,436 - -0.1
431,436 - +0.3
431,449 + -0.1
431,476 - -0.4
431,482 + -0.3
431,545 + +0.9
431,545 + -0.1
431,549 - +0.1
431,549 - -0.2
431,553 - -0.2
431,553 - -0.1
431,553 - +0.3
431,553 - +0.6
431,614 - -0.1
431,640 + B158DRAFT_0428 0.11 +0.6
431,640 + B158DRAFT_0428 0.11 +0.6
431,640 + B158DRAFT_0428 0.11 -0.5
431,648 - B158DRAFT_0428 0.11 +0.5
431,751 - B158DRAFT_0428 0.18 -0.2
431,810 + B158DRAFT_0428 0.22 -0.3
431,816 - B158DRAFT_0428 0.22 +0.1
431,818 - B158DRAFT_0428 0.22 +0.2
431,843 - B158DRAFT_0428 0.24 -0.2
431,845 + B158DRAFT_0428 0.24 -0.2
431,853 - B158DRAFT_0428 0.25 +0.4
431,853 - B158DRAFT_0428 0.25 +0.8
431,906 + B158DRAFT_0428 0.28 +0.1
431,965 + B158DRAFT_0428 0.32 +0.3
431,973 - B158DRAFT_0428 0.32 +0.1
431,973 - B158DRAFT_0428 0.32 +1.0
432,050 - B158DRAFT_0428 0.37 -0.1
432,055 - B158DRAFT_0428 0.38 -0.4
432,092 - B158DRAFT_0428 0.40 +0.1
432,107 + B158DRAFT_0428 0.41 -0.3
432,107 + B158DRAFT_0428 0.41 +0.1
432,115 - B158DRAFT_0428 0.42 +0.0
432,139 + B158DRAFT_0428 0.43 -0.2
432,228 + B158DRAFT_0428 0.49 +0.4
432,256 + B158DRAFT_0428 0.51 -0.0
432,256 + B158DRAFT_0428 0.51 -0.7
432,264 - B158DRAFT_0428 0.51 -0.4
432,264 - B158DRAFT_0428 0.51 -0.4
432,264 - B158DRAFT_0428 0.51 +0.0
432,264 - B158DRAFT_0428 0.51 -0.4
432,264 - B158DRAFT_0428 0.51 -0.8
432,264 - B158DRAFT_0428 0.51 -0.4
432,298 + B158DRAFT_0428 0.53 -0.1
432,298 + B158DRAFT_0428 0.53 -0.7
432,306 - B158DRAFT_0428 0.54 +0.7
432,308 - B158DRAFT_0428 0.54 -0.7
432,319 - B158DRAFT_0428 0.55 -0.1
432,369 + B158DRAFT_0428 0.58 -0.3
432,369 + B158DRAFT_0428 0.58 -0.1
432,369 + B158DRAFT_0428 0.58 -0.0
432,369 + B158DRAFT_0428 0.58 -1.2
432,382 - B158DRAFT_0428 0.59 +0.2
432,384 + B158DRAFT_0428 0.59 -0.0
432,384 + B158DRAFT_0428 0.59 -1.0
432,384 + B158DRAFT_0428 0.59 +0.1
432,392 - B158DRAFT_0428 0.60 -0.2
432,392 - B158DRAFT_0428 0.60 -0.5
432,447 + B158DRAFT_0428 0.63 -0.2
432,482 + B158DRAFT_0428 0.65 -1.0
432,482 + B158DRAFT_0428 0.65 -0.4
432,487 + B158DRAFT_0428 0.66 -0.6
432,501 + B158DRAFT_0428 0.67 -0.3
432,529 - B158DRAFT_0428 0.68 +0.3
432,530 + B158DRAFT_0428 0.68 -0.7
432,533 - B158DRAFT_0428 0.69 -0.2
432,533 - B158DRAFT_0428 0.69 -0.3
432,541 + B158DRAFT_0428 0.69 -0.3
432,554 + B158DRAFT_0428 0.70 -0.7
432,565 + B158DRAFT_0428 0.71 -0.4
432,573 - B158DRAFT_0428 0.71 -0.5
432,587 + B158DRAFT_0428 0.72 +0.4
432,587 + B158DRAFT_0428 0.72 -0.4
432,595 - B158DRAFT_0428 0.73 -0.4
432,602 + B158DRAFT_0428 0.73 +0.1
432,610 - B158DRAFT_0428 0.74 -0.2
432,644 - B158DRAFT_0428 0.76 -0.4
432,679 - B158DRAFT_0428 0.78 +0.9
432,681 + B158DRAFT_0428 0.78 +1.5
432,693 + B158DRAFT_0428 0.79 -0.4
432,716 - B158DRAFT_0428 0.81 +0.1
432,737 + B158DRAFT_0428 0.82 -0.2
432,737 + B158DRAFT_0428 0.82 -0.6
432,737 + B158DRAFT_0428 0.82 -0.1
432,745 - B158DRAFT_0428 0.82 -0.4
432,745 - B158DRAFT_0428 0.82 -0.1
432,754 - B158DRAFT_0428 0.83 -0.3
432,761 + B158DRAFT_0428 0.83 -0.5
432,816 + B158DRAFT_0428 0.87 -0.2
432,816 + B158DRAFT_0428 0.87 -0.7
432,824 - B158DRAFT_0428 0.88 -0.4
432,842 - B158DRAFT_0428 0.89 -0.1
432,887 + -0.7
432,895 - +0.0
432,947 - -0.2
433,043 + -1.1
433,048 + -0.4
433,048 + -0.4
433,048 + +0.1
433,061 - +0.5
433,061 - +0.4
433,128 + -0.0
433,136 - +0.1
433,194 + B158DRAFT_0429 0.11 +0.2
433,202 - B158DRAFT_0429 0.11 -0.0
433,212 - B158DRAFT_0429 0.12 +0.0
433,223 - B158DRAFT_0429 0.13 +0.9
433,245 + B158DRAFT_0429 0.14 +0.0
433,245 + B158DRAFT_0429 0.14 +0.5
433,245 + B158DRAFT_0429 0.14 -0.2
433,245 + B158DRAFT_0429 0.14 +0.4
433,245 + B158DRAFT_0429 0.14 +0.7
433,245 + B158DRAFT_0429 0.14 -0.1
433,253 - B158DRAFT_0429 0.14 +0.2
433,253 - B158DRAFT_0429 0.14 +0.1
433,253 - B158DRAFT_0429 0.14 -0.0
433,253 - B158DRAFT_0429 0.14 +0.2
433,293 + B158DRAFT_0429 0.17 -0.1
433,293 + B158DRAFT_0429 0.17 +0.0
433,294 + B158DRAFT_0429 0.17 +0.1
433,294 + B158DRAFT_0429 0.17 +1.4
433,294 + B158DRAFT_0429 0.17 +0.5
433,294 + B158DRAFT_0429 0.17 -0.4
433,301 - B158DRAFT_0429 0.17 +0.0
433,302 - B158DRAFT_0429 0.17 -0.0
433,302 - B158DRAFT_0429 0.17 +0.9
433,302 - B158DRAFT_0429 0.17 -0.4
433,302 - B158DRAFT_0429 0.17 -0.1
433,302 - B158DRAFT_0429 0.17 -0.1
433,362 + B158DRAFT_0429 0.21 +0.1
433,443 + B158DRAFT_0429 0.25 -0.4
433,451 + B158DRAFT_0429 0.26 -0.1
433,467 + B158DRAFT_0429 0.27 +0.2
433,478 + B158DRAFT_0429 0.27 +0.3
433,551 + B158DRAFT_0429 0.32 +1.3
433,567 - B158DRAFT_0429 0.33 +0.0
433,585 - B158DRAFT_0429 0.34 +0.1
433,585 - B158DRAFT_0429 0.34 -0.2
433,587 + B158DRAFT_0429 0.34 +0.0
433,615 + B158DRAFT_0429 0.35 +0.0
433,617 + B158DRAFT_0429 0.35 +0.1
433,618 - B158DRAFT_0429 0.35 +0.1
433,618 - B158DRAFT_0429 0.35 +1.1
433,693 + B158DRAFT_0429 0.40 -0.7
433,772 - B158DRAFT_0429 0.44 -0.6
433,793 + B158DRAFT_0429 0.46 +0.1
433,793 + B158DRAFT_0429 0.46 -0.6
433,824 + B158DRAFT_0429 0.47 +0.2
433,922 + B158DRAFT_0429 0.53 -0.2
433,930 - B158DRAFT_0429 0.53 +0.2
433,930 - B158DRAFT_0429 0.53 +0.2
433,930 - B158DRAFT_0429 0.53 +0.1
433,930 - B158DRAFT_0429 0.53 +0.1
433,947 + B158DRAFT_0429 0.54 -0.1
433,983 - B158DRAFT_0429 0.57 +0.2

Or see this region's nucleotide sequence