Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0342

Experiment: m.b. Choline chloride 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0341 and B158DRAFT_0342 are separated by 259 nucleotidesB158DRAFT_0342 and B158DRAFT_0343 are separated by 16 nucleotides B158DRAFT_0341: B158DRAFT_0341 - hypothetical protein, at 341,454 to 342,233 _0341 B158DRAFT_0342: B158DRAFT_0342 - integron integrase, at 342,493 to 343,458 _0342 B158DRAFT_0343: B158DRAFT_0343 - Mg chelatase-related protein, at 343,475 to 345,004 _0343 Position (kb) 342 343 344Strain fitness (log2 ratio) -1 0 1at 341.493 kb on - strandat 341.493 kb on - strandat 341.507 kb on + strandat 341.517 kb on + strandat 341.517 kb on + strandat 341.517 kb on + strandat 341.517 kb on + strandat 341.525 kb on - strandat 341.525 kb on - strandat 341.525 kb on - strandat 341.525 kb on - strandat 341.527 kb on + strandat 341.584 kb on - strand, within B158DRAFT_0341at 341.655 kb on - strand, within B158DRAFT_0341at 341.673 kb on + strand, within B158DRAFT_0341at 341.673 kb on + strand, within B158DRAFT_0341at 341.681 kb on - strand, within B158DRAFT_0341at 341.728 kb on + strand, within B158DRAFT_0341at 341.824 kb on - strand, within B158DRAFT_0341at 341.912 kb on - strand, within B158DRAFT_0341at 341.918 kb on + strand, within B158DRAFT_0341at 341.926 kb on - strand, within B158DRAFT_0341at 341.974 kb on - strand, within B158DRAFT_0341at 342.199 kb on - strandat 342.417 kb on - strandat 342.575 kb on - strandat 342.729 kb on - strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.770 kb on + strand, within B158DRAFT_0342at 342.778 kb on - strand, within B158DRAFT_0342at 342.778 kb on - strand, within B158DRAFT_0342at 342.778 kb on - strand, within B158DRAFT_0342at 342.778 kb on - strand, within B158DRAFT_0342at 342.895 kb on - strand, within B158DRAFT_0342at 342.955 kb on + strand, within B158DRAFT_0342at 342.961 kb on - strand, within B158DRAFT_0342at 343.180 kb on - strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.354 kb on + strand, within B158DRAFT_0342at 343.362 kb on - strandat 343.362 kb on - strandat 343.362 kb on - strandat 343.362 kb on - strandat 343.362 kb on - strandat 343.362 kb on - strandat 343.362 kb on - strandat 343.362 kb on - strandat 343.362 kb on - strandat 343.403 kb on - strandat 343.422 kb on + strandat 343.498 kb on - strandat 343.531 kb on - strandat 343.812 kb on + strand, within B158DRAFT_0343at 343.850 kb on + strand, within B158DRAFT_0343at 343.855 kb on + strand, within B158DRAFT_0343at 343.855 kb on + strand, within B158DRAFT_0343at 343.855 kb on + strand, within B158DRAFT_0343at 343.855 kb on + strand, within B158DRAFT_0343at 343.855 kb on + strand, within B158DRAFT_0343at 343.855 kb on + strand, within B158DRAFT_0343at 343.858 kb on - strand, within B158DRAFT_0343at 343.863 kb on - strand, within B158DRAFT_0343at 343.863 kb on - strand, within B158DRAFT_0343at 343.868 kb on - strand, within B158DRAFT_0343at 343.878 kb on - strand, within B158DRAFT_0343at 343.913 kb on + strand, within B158DRAFT_0343at 343.913 kb on + strand, within B158DRAFT_0343at 343.914 kb on + strand, within B158DRAFT_0343at 343.966 kb on - strand, within B158DRAFT_0343at 343.981 kb on + strand, within B158DRAFT_0343at 343.981 kb on + strand, within B158DRAFT_0343at 344.149 kb on - strand, within B158DRAFT_0343at 344.155 kb on + strand, within B158DRAFT_0343at 344.155 kb on + strand, within B158DRAFT_0343at 344.155 kb on + strand, within B158DRAFT_0343at 344.163 kb on - strand, within B158DRAFT_0343at 344.209 kb on - strand, within B158DRAFT_0343at 344.280 kb on - strand, within B158DRAFT_0343at 344.290 kb on + strand, within B158DRAFT_0343at 344.290 kb on + strand, within B158DRAFT_0343at 344.290 kb on + strand, within B158DRAFT_0343at 344.290 kb on + strand, within B158DRAFT_0343at 344.290 kb on + strand, within B158DRAFT_0343at 344.290 kb on + strand, within B158DRAFT_0343at 344.290 kb on + strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343at 344.298 kb on - strand, within B158DRAFT_0343

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM
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341,493 - -0.4
341,493 - -0.3
341,507 + +0.1
341,517 + +0.1
341,517 + +0.1
341,517 + -0.2
341,517 + +0.3
341,525 - -0.2
341,525 - -0.1
341,525 - -0.1
341,525 - +0.3
341,527 + +0.0
341,584 - B158DRAFT_0341 0.17 +0.1
341,655 - B158DRAFT_0341 0.26 +0.3
341,673 + B158DRAFT_0341 0.28 -0.0
341,673 + B158DRAFT_0341 0.28 -0.4
341,681 - B158DRAFT_0341 0.29 -0.2
341,728 + B158DRAFT_0341 0.35 +0.3
341,824 - B158DRAFT_0341 0.47 -0.0
341,912 - B158DRAFT_0341 0.59 -0.1
341,918 + B158DRAFT_0341 0.59 +0.2
341,926 - B158DRAFT_0341 0.61 -0.1
341,974 - B158DRAFT_0341 0.67 +0.5
342,199 - -0.3
342,417 - +0.5
342,575 - +0.2
342,729 - B158DRAFT_0342 0.24 -0.0
342,770 + B158DRAFT_0342 0.29 -0.0
342,770 + B158DRAFT_0342 0.29 +0.5
342,770 + B158DRAFT_0342 0.29 +0.9
342,770 + B158DRAFT_0342 0.29 +0.4
342,770 + B158DRAFT_0342 0.29 -0.2
342,770 + B158DRAFT_0342 0.29 -0.3
342,770 + B158DRAFT_0342 0.29 -0.0
342,770 + B158DRAFT_0342 0.29 -0.1
342,770 + B158DRAFT_0342 0.29 +0.5
342,770 + B158DRAFT_0342 0.29 -0.4
342,770 + B158DRAFT_0342 0.29 -0.3
342,778 - B158DRAFT_0342 0.30 -0.3
342,778 - B158DRAFT_0342 0.30 +0.2
342,778 - B158DRAFT_0342 0.30 +0.0
342,778 - B158DRAFT_0342 0.30 +0.3
342,895 - B158DRAFT_0342 0.42 -0.3
342,955 + B158DRAFT_0342 0.48 -0.2
342,961 - B158DRAFT_0342 0.48 +0.3
343,180 - B158DRAFT_0342 0.71 +0.1
343,354 + B158DRAFT_0342 0.89 +0.9
343,354 + B158DRAFT_0342 0.89 -0.1
343,354 + B158DRAFT_0342 0.89 -0.3
343,354 + B158DRAFT_0342 0.89 -0.2
343,354 + B158DRAFT_0342 0.89 +0.9
343,354 + B158DRAFT_0342 0.89 -0.1
343,354 + B158DRAFT_0342 0.89 -0.2
343,354 + B158DRAFT_0342 0.89 +0.1
343,354 + B158DRAFT_0342 0.89 +0.2
343,354 + B158DRAFT_0342 0.89 +0.1
343,362 - -0.5
343,362 - -0.3
343,362 - -0.7
343,362 - +0.0
343,362 - -0.6
343,362 - +0.1
343,362 - -0.1
343,362 - -0.3
343,362 - -0.0
343,403 - -0.7
343,422 + -0.4
343,498 - -0.3
343,531 - +0.2
343,812 + B158DRAFT_0343 0.22 -0.4
343,850 + B158DRAFT_0343 0.25 -0.1
343,855 + B158DRAFT_0343 0.25 -0.3
343,855 + B158DRAFT_0343 0.25 -0.3
343,855 + B158DRAFT_0343 0.25 -0.3
343,855 + B158DRAFT_0343 0.25 -0.8
343,855 + B158DRAFT_0343 0.25 -0.2
343,855 + B158DRAFT_0343 0.25 -0.4
343,858 - B158DRAFT_0343 0.25 +0.1
343,863 - B158DRAFT_0343 0.25 -0.6
343,863 - B158DRAFT_0343 0.25 -0.2
343,868 - B158DRAFT_0343 0.26 +0.1
343,878 - B158DRAFT_0343 0.26 +0.1
343,913 + B158DRAFT_0343 0.29 +0.1
343,913 + B158DRAFT_0343 0.29 -0.5
343,914 + B158DRAFT_0343 0.29 +0.3
343,966 - B158DRAFT_0343 0.32 +0.7
343,981 + B158DRAFT_0343 0.33 -0.1
343,981 + B158DRAFT_0343 0.33 +0.2
344,149 - B158DRAFT_0343 0.44 +0.2
344,155 + B158DRAFT_0343 0.44 -0.1
344,155 + B158DRAFT_0343 0.44 +0.2
344,155 + B158DRAFT_0343 0.44 +0.4
344,163 - B158DRAFT_0343 0.45 +0.1
344,209 - B158DRAFT_0343 0.48 -0.0
344,280 - B158DRAFT_0343 0.53 -0.1
344,290 + B158DRAFT_0343 0.53 +0.2
344,290 + B158DRAFT_0343 0.53 +0.6
344,290 + B158DRAFT_0343 0.53 -0.3
344,290 + B158DRAFT_0343 0.53 +0.6
344,290 + B158DRAFT_0343 0.53 +0.4
344,290 + B158DRAFT_0343 0.53 -0.8
344,290 + B158DRAFT_0343 0.53 +0.0
344,298 - B158DRAFT_0343 0.54 +0.6
344,298 - B158DRAFT_0343 0.54 +0.0
344,298 - B158DRAFT_0343 0.54 -0.1
344,298 - B158DRAFT_0343 0.54 -0.3
344,298 - B158DRAFT_0343 0.54 +0.1
344,298 - B158DRAFT_0343 0.54 +0.5
344,298 - B158DRAFT_0343 0.54 +0.1
344,298 - B158DRAFT_0343 0.54 -0.2
344,298 - B158DRAFT_0343 0.54 +0.2

Or see this region's nucleotide sequence