Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0271

Experiment: m.b. Choline chloride 15 mM

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0270 and B158DRAFT_0271 are separated by 169 nucleotidesB158DRAFT_0271 and B158DRAFT_0272 are separated by 20 nucleotides B158DRAFT_0270: B158DRAFT_0270 - VanZ like family., at 274,593 to 275,720 _0270 B158DRAFT_0271: B158DRAFT_0271 - acyl-CoA ligase (AMP-forming), exosortase A-associated, at 275,890 to 277,467 _0271 B158DRAFT_0272: B158DRAFT_0272 - pyridoxal-dependent decarboxylase, exosortase A system-associated, at 277,488 to 278,714 _0272 Position (kb) 275 276 277 278Strain fitness (log2 ratio) -2 -1 0 1at 275.027 kb on + strand, within B158DRAFT_0270at 275.066 kb on + strand, within B158DRAFT_0270at 275.074 kb on - strand, within B158DRAFT_0270at 275.127 kb on + strand, within B158DRAFT_0270at 275.127 kb on + strand, within B158DRAFT_0270at 275.127 kb on + strand, within B158DRAFT_0270at 275.132 kb on + strand, within B158DRAFT_0270at 275.177 kb on + strand, within B158DRAFT_0270at 275.189 kb on + strand, within B158DRAFT_0270at 275.196 kb on + strand, within B158DRAFT_0270at 275.221 kb on + strand, within B158DRAFT_0270at 275.221 kb on + strand, within B158DRAFT_0270at 275.221 kb on + strand, within B158DRAFT_0270at 275.229 kb on - strand, within B158DRAFT_0270at 275.229 kb on - strand, within B158DRAFT_0270at 275.284 kb on - strand, within B158DRAFT_0270at 275.301 kb on + strand, within B158DRAFT_0270at 275.322 kb on + strand, within B158DRAFT_0270at 275.330 kb on + strand, within B158DRAFT_0270at 275.330 kb on - strand, within B158DRAFT_0270at 275.330 kb on - strand, within B158DRAFT_0270at 275.340 kb on - strand, within B158DRAFT_0270at 275.365 kb on - strand, within B158DRAFT_0270at 275.394 kb on + strand, within B158DRAFT_0270at 275.403 kb on - strand, within B158DRAFT_0270at 275.478 kb on + strand, within B158DRAFT_0270at 275.488 kb on + strand, within B158DRAFT_0270at 275.491 kb on - strand, within B158DRAFT_0270at 275.495 kb on + strand, within B158DRAFT_0270at 275.534 kb on - strand, within B158DRAFT_0270at 275.551 kb on + strand, within B158DRAFT_0270at 275.551 kb on + strand, within B158DRAFT_0270at 275.551 kb on + strand, within B158DRAFT_0270at 275.593 kb on + strand, within B158DRAFT_0270at 275.601 kb on - strand, within B158DRAFT_0270at 275.601 kb on - strand, within B158DRAFT_0270at 275.601 kb on - strand, within B158DRAFT_0270at 275.601 kb on - strand, within B158DRAFT_0270at 275.654 kb on - strandat 275.733 kb on - strandat 275.786 kb on - strandat 275.821 kb on - strandat 277.484 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM
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275,027 + B158DRAFT_0270 0.38 -0.5
275,066 + B158DRAFT_0270 0.42 -0.4
275,074 - B158DRAFT_0270 0.43 +1.0
275,127 + B158DRAFT_0270 0.47 -0.4
275,127 + B158DRAFT_0270 0.47 -0.7
275,127 + B158DRAFT_0270 0.47 -0.4
275,132 + B158DRAFT_0270 0.48 -0.9
275,177 + B158DRAFT_0270 0.52 -0.3
275,189 + B158DRAFT_0270 0.53 -0.6
275,196 + B158DRAFT_0270 0.53 -0.6
275,221 + B158DRAFT_0270 0.56 -0.6
275,221 + B158DRAFT_0270 0.56 -0.4
275,221 + B158DRAFT_0270 0.56 -0.5
275,229 - B158DRAFT_0270 0.56 +0.1
275,229 - B158DRAFT_0270 0.56 -0.5
275,284 - B158DRAFT_0270 0.61 -0.2
275,301 + B158DRAFT_0270 0.63 -1.9
275,322 + B158DRAFT_0270 0.65 -0.3
275,330 + B158DRAFT_0270 0.65 -0.4
275,330 - B158DRAFT_0270 0.65 -0.2
275,330 - B158DRAFT_0270 0.65 -0.2
275,340 - B158DRAFT_0270 0.66 -0.5
275,365 - B158DRAFT_0270 0.68 -0.0
275,394 + B158DRAFT_0270 0.71 -0.0
275,403 - B158DRAFT_0270 0.72 +0.4
275,478 + B158DRAFT_0270 0.78 -0.4
275,488 + B158DRAFT_0270 0.79 -0.4
275,491 - B158DRAFT_0270 0.80 -0.6
275,495 + B158DRAFT_0270 0.80 -0.8
275,534 - B158DRAFT_0270 0.83 -0.4
275,551 + B158DRAFT_0270 0.85 -0.6
275,551 + B158DRAFT_0270 0.85 +0.0
275,551 + B158DRAFT_0270 0.85 -0.8
275,593 + B158DRAFT_0270 0.89 -0.2
275,601 - B158DRAFT_0270 0.89 -0.6
275,601 - B158DRAFT_0270 0.89 -0.2
275,601 - B158DRAFT_0270 0.89 +0.2
275,601 - B158DRAFT_0270 0.89 -0.4
275,654 - -0.3
275,733 - -0.2
275,786 - +0.0
275,821 - -0.2
277,484 + -1.5

Or see this region's nucleotide sequence