Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0123

Experiment: m.b. Choline chloride 15 mM

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0122 and B158DRAFT_0123 are separated by 14 nucleotidesB158DRAFT_0123 and B158DRAFT_0124 are separated by 2 nucleotides B158DRAFT_0122: B158DRAFT_0122 - NADH-quinone oxidoreductase, F subunit, at 119,992 to 121,287 _0122 B158DRAFT_0123: B158DRAFT_0123 - NADH dehydrogenase subunit E (EC 1.6.5.3), at 121,302 to 121,796 _0123 B158DRAFT_0124: B158DRAFT_0124 - NADH dehydrogenase subunit D (EC 1.6.5.3), at 121,799 to 123,052 _0124 Position (kb) 121 122Strain fitness (log2 ratio) -1 0 1 2 3 4at 120.349 kb on - strand, within B158DRAFT_0122at 120.354 kb on - strand, within B158DRAFT_0122at 120.377 kb on + strand, within B158DRAFT_0122at 120.418 kb on + strand, within B158DRAFT_0122at 120.425 kb on + strand, within B158DRAFT_0122at 120.426 kb on - strand, within B158DRAFT_0122at 120.431 kb on - strand, within B158DRAFT_0122at 120.435 kb on - strand, within B158DRAFT_0122at 120.449 kb on + strand, within B158DRAFT_0122at 120.457 kb on - strand, within B158DRAFT_0122at 120.457 kb on - strand, within B158DRAFT_0122at 120.457 kb on - strand, within B158DRAFT_0122at 120.457 kb on - strand, within B158DRAFT_0122at 120.484 kb on - strand, within B158DRAFT_0122at 120.506 kb on + strand, within B158DRAFT_0122at 120.506 kb on + strand, within B158DRAFT_0122at 120.514 kb on - strand, within B158DRAFT_0122at 120.514 kb on - strand, within B158DRAFT_0122at 120.514 kb on - strand, within B158DRAFT_0122at 120.645 kb on - strand, within B158DRAFT_0122at 120.697 kb on - strand, within B158DRAFT_0122at 120.737 kb on + strand, within B158DRAFT_0122at 120.819 kb on + strand, within B158DRAFT_0122at 120.826 kb on + strand, within B158DRAFT_0122at 120.826 kb on - strand, within B158DRAFT_0122at 120.891 kb on + strand, within B158DRAFT_0122at 120.933 kb on + strand, within B158DRAFT_0122at 120.976 kb on - strand, within B158DRAFT_0122at 120.980 kb on - strand, within B158DRAFT_0122at 121.011 kb on + strand, within B158DRAFT_0122at 121.011 kb on + strand, within B158DRAFT_0122at 121.011 kb on + strand, within B158DRAFT_0122at 121.019 kb on - strand, within B158DRAFT_0122at 121.067 kb on + strand, within B158DRAFT_0122at 121.080 kb on + strand, within B158DRAFT_0122at 121.101 kb on - strand, within B158DRAFT_0122at 121.119 kb on + strand, within B158DRAFT_0122at 121.129 kb on + strand, within B158DRAFT_0122at 121.129 kb on + strand, within B158DRAFT_0122at 121.208 kb on - strandat 121.228 kb on + strandat 121.238 kb on + strandat 121.238 kb on + strandat 121.299 kb on + strandat 121.299 kb on + strandat 121.307 kb on - strandat 121.307 kb on - strandat 121.308 kb on - strandat 121.423 kb on - strand, within B158DRAFT_0123at 121.436 kb on + strand, within B158DRAFT_0123at 121.444 kb on - strand, within B158DRAFT_0123at 121.451 kb on - strand, within B158DRAFT_0123at 121.462 kb on - strand, within B158DRAFT_0123at 121.462 kb on - strand, within B158DRAFT_0123at 121.659 kb on + strand, within B158DRAFT_0123at 121.659 kb on + strand, within B158DRAFT_0123at 121.680 kb on + strand, within B158DRAFT_0123at 121.717 kb on + strand, within B158DRAFT_0123at 121.717 kb on + strand, within B158DRAFT_0123at 121.717 kb on + strand, within B158DRAFT_0123at 121.828 kb on + strandat 121.829 kb on - strandat 121.914 kb on + strandat 121.958 kb on - strand, within B158DRAFT_0124at 121.998 kb on + strand, within B158DRAFT_0124at 122.014 kb on + strand, within B158DRAFT_0124at 122.030 kb on - strand, within B158DRAFT_0124at 122.030 kb on - strand, within B158DRAFT_0124at 122.030 kb on - strand, within B158DRAFT_0124at 122.030 kb on - strand, within B158DRAFT_0124at 122.131 kb on - strand, within B158DRAFT_0124at 122.142 kb on - strand, within B158DRAFT_0124at 122.155 kb on - strand, within B158DRAFT_0124at 122.155 kb on - strand, within B158DRAFT_0124at 122.155 kb on - strand, within B158DRAFT_0124at 122.261 kb on + strand, within B158DRAFT_0124at 122.269 kb on - strand, within B158DRAFT_0124at 122.290 kb on - strand, within B158DRAFT_0124at 122.293 kb on + strand, within B158DRAFT_0124at 122.301 kb on - strand, within B158DRAFT_0124at 122.302 kb on - strand, within B158DRAFT_0124at 122.302 kb on - strand, within B158DRAFT_0124at 122.305 kb on + strand, within B158DRAFT_0124at 122.305 kb on + strand, within B158DRAFT_0124at 122.313 kb on - strand, within B158DRAFT_0124at 122.313 kb on - strand, within B158DRAFT_0124at 122.315 kb on + strand, within B158DRAFT_0124at 122.320 kb on + strand, within B158DRAFT_0124at 122.320 kb on + strand, within B158DRAFT_0124at 122.320 kb on + strand, within B158DRAFT_0124at 122.328 kb on - strand, within B158DRAFT_0124at 122.352 kb on + strand, within B158DRAFT_0124at 122.353 kb on + strand, within B158DRAFT_0124at 122.353 kb on + strand, within B158DRAFT_0124at 122.353 kb on + strand, within B158DRAFT_0124at 122.353 kb on + strand, within B158DRAFT_0124at 122.358 kb on + strand, within B158DRAFT_0124at 122.358 kb on + strand, within B158DRAFT_0124at 122.361 kb on - strand, within B158DRAFT_0124at 122.361 kb on - strand, within B158DRAFT_0124at 122.361 kb on - strand, within B158DRAFT_0124at 122.361 kb on - strand, within B158DRAFT_0124at 122.361 kb on - strand, within B158DRAFT_0124at 122.361 kb on - strand, within B158DRAFT_0124at 122.361 kb on - strand, within B158DRAFT_0124at 122.361 kb on - strand, within B158DRAFT_0124at 122.372 kb on + strand, within B158DRAFT_0124at 122.428 kb on + strand, within B158DRAFT_0124at 122.455 kb on - strand, within B158DRAFT_0124at 122.481 kb on + strand, within B158DRAFT_0124at 122.496 kb on + strand, within B158DRAFT_0124at 122.496 kb on + strand, within B158DRAFT_0124at 122.504 kb on - strand, within B158DRAFT_0124at 122.504 kb on - strand, within B158DRAFT_0124at 122.504 kb on - strand, within B158DRAFT_0124at 122.514 kb on - strand, within B158DRAFT_0124at 122.538 kb on + strand, within B158DRAFT_0124at 122.538 kb on + strand, within B158DRAFT_0124at 122.546 kb on - strand, within B158DRAFT_0124at 122.656 kb on + strand, within B158DRAFT_0124at 122.709 kb on - strand, within B158DRAFT_0124at 122.773 kb on - strand, within B158DRAFT_0124at 122.783 kb on - strand, within B158DRAFT_0124at 122.784 kb on + strand, within B158DRAFT_0124at 122.793 kb on + strand, within B158DRAFT_0124at 122.793 kb on - strand, within B158DRAFT_0124at 122.793 kb on - strand, within B158DRAFT_0124at 122.793 kb on - strand, within B158DRAFT_0124

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Choline chloride 15 mM
remove
120,349 - B158DRAFT_0122 0.28 +2.0
120,354 - B158DRAFT_0122 0.28 +2.5
120,377 + B158DRAFT_0122 0.30 +4.1
120,418 + B158DRAFT_0122 0.33 +4.1
120,425 + B158DRAFT_0122 0.33 +4.0
120,426 - B158DRAFT_0122 0.33 +2.3
120,431 - B158DRAFT_0122 0.34 +2.1
120,435 - B158DRAFT_0122 0.34 +1.9
120,449 + B158DRAFT_0122 0.35 +3.9
120,457 - B158DRAFT_0122 0.36 +2.8
120,457 - B158DRAFT_0122 0.36 +2.4
120,457 - B158DRAFT_0122 0.36 +2.5
120,457 - B158DRAFT_0122 0.36 +2.2
120,484 - B158DRAFT_0122 0.38 +2.3
120,506 + B158DRAFT_0122 0.40 +4.2
120,506 + B158DRAFT_0122 0.40 +4.2
120,514 - B158DRAFT_0122 0.40 +2.4
120,514 - B158DRAFT_0122 0.40 +2.1
120,514 - B158DRAFT_0122 0.40 +2.1
120,645 - B158DRAFT_0122 0.50 +2.3
120,697 - B158DRAFT_0122 0.54 +2.7
120,737 + B158DRAFT_0122 0.57 +3.9
120,819 + B158DRAFT_0122 0.64 +4.0
120,826 + B158DRAFT_0122 0.64 +4.2
120,826 - B158DRAFT_0122 0.64 +2.5
120,891 + B158DRAFT_0122 0.69 +4.0
120,933 + B158DRAFT_0122 0.73 +3.9
120,976 - B158DRAFT_0122 0.76 +2.5
120,980 - B158DRAFT_0122 0.76 +2.1
121,011 + B158DRAFT_0122 0.79 +3.7
121,011 + B158DRAFT_0122 0.79 +3.7
121,011 + B158DRAFT_0122 0.79 +4.0
121,019 - B158DRAFT_0122 0.79 +2.7
121,067 + B158DRAFT_0122 0.83 +4.1
121,080 + B158DRAFT_0122 0.84 +4.1
121,101 - B158DRAFT_0122 0.86 +2.8
121,119 + B158DRAFT_0122 0.87 +4.0
121,129 + B158DRAFT_0122 0.88 +4.4
121,129 + B158DRAFT_0122 0.88 +3.8
121,208 - +2.8
121,228 + +3.9
121,238 + +4.0
121,238 + +4.2
121,299 + +3.7
121,299 + +4.1
121,307 - +0.2
121,307 - +0.6
121,308 - +0.1
121,423 - B158DRAFT_0123 0.24 +2.6
121,436 + B158DRAFT_0123 0.27 +4.4
121,444 - B158DRAFT_0123 0.29 +2.5
121,451 - B158DRAFT_0123 0.30 +2.2
121,462 - B158DRAFT_0123 0.32 +2.7
121,462 - B158DRAFT_0123 0.32 +2.5
121,659 + B158DRAFT_0123 0.72 +3.9
121,659 + B158DRAFT_0123 0.72 +3.8
121,680 + B158DRAFT_0123 0.76 +4.0
121,717 + B158DRAFT_0123 0.84 +4.0
121,717 + B158DRAFT_0123 0.84 +4.3
121,717 + B158DRAFT_0123 0.84 +3.9
121,828 + +4.1
121,829 - +2.9
121,914 + +3.8
121,958 - B158DRAFT_0124 0.13 +4.1
121,998 + B158DRAFT_0124 0.16 +3.8
122,014 + B158DRAFT_0124 0.17 +3.5
122,030 - B158DRAFT_0124 0.18 +3.8
122,030 - B158DRAFT_0124 0.18 +3.5
122,030 - B158DRAFT_0124 0.18 +3.9
122,030 - B158DRAFT_0124 0.18 +3.8
122,131 - B158DRAFT_0124 0.26 +3.2
122,142 - B158DRAFT_0124 0.27 +3.5
122,155 - B158DRAFT_0124 0.28 +3.5
122,155 - B158DRAFT_0124 0.28 +3.9
122,155 - B158DRAFT_0124 0.28 +3.6
122,261 + B158DRAFT_0124 0.37 +4.3
122,269 - B158DRAFT_0124 0.37 +3.5
122,290 - B158DRAFT_0124 0.39 +4.2
122,293 + B158DRAFT_0124 0.39 +4.0
122,301 - B158DRAFT_0124 0.40 +3.8
122,302 - B158DRAFT_0124 0.40 +3.8
122,302 - B158DRAFT_0124 0.40 +1.1
122,305 + B158DRAFT_0124 0.40 +4.0
122,305 + B158DRAFT_0124 0.40 +3.8
122,313 - B158DRAFT_0124 0.41 +3.7
122,313 - B158DRAFT_0124 0.41 +3.6
122,315 + B158DRAFT_0124 0.41 +3.9
122,320 + B158DRAFT_0124 0.42 +4.1
122,320 + B158DRAFT_0124 0.42 +4.2
122,320 + B158DRAFT_0124 0.42 +4.2
122,328 - B158DRAFT_0124 0.42 +3.8
122,352 + B158DRAFT_0124 0.44 +4.1
122,353 + B158DRAFT_0124 0.44 +3.6
122,353 + B158DRAFT_0124 0.44 +4.1
122,353 + B158DRAFT_0124 0.44 +4.4
122,353 + B158DRAFT_0124 0.44 +4.0
122,358 + B158DRAFT_0124 0.45 +3.7
122,358 + B158DRAFT_0124 0.45 +4.1
122,361 - B158DRAFT_0124 0.45 +4.0
122,361 - B158DRAFT_0124 0.45 +4.0
122,361 - B158DRAFT_0124 0.45 +3.9
122,361 - B158DRAFT_0124 0.45 +3.9
122,361 - B158DRAFT_0124 0.45 +3.8
122,361 - B158DRAFT_0124 0.45 +3.9
122,361 - B158DRAFT_0124 0.45 +3.8
122,361 - B158DRAFT_0124 0.45 +3.4
122,372 + B158DRAFT_0124 0.46 +4.2
122,428 + B158DRAFT_0124 0.50 +4.1
122,455 - B158DRAFT_0124 0.52 +3.6
122,481 + B158DRAFT_0124 0.54 +3.6
122,496 + B158DRAFT_0124 0.56 +4.2
122,496 + B158DRAFT_0124 0.56 +4.3
122,504 - B158DRAFT_0124 0.56 +3.6
122,504 - B158DRAFT_0124 0.56 +3.8
122,504 - B158DRAFT_0124 0.56 +3.9
122,514 - B158DRAFT_0124 0.57 +3.8
122,538 + B158DRAFT_0124 0.59 +4.0
122,538 + B158DRAFT_0124 0.59 +3.9
122,546 - B158DRAFT_0124 0.60 +3.8
122,656 + B158DRAFT_0124 0.68 +3.7
122,709 - B158DRAFT_0124 0.73 +3.8
122,773 - B158DRAFT_0124 0.78 +3.7
122,783 - B158DRAFT_0124 0.78 +3.9
122,784 + B158DRAFT_0124 0.79 +2.9
122,793 + B158DRAFT_0124 0.79 +4.0
122,793 - B158DRAFT_0124 0.79 +3.7
122,793 - B158DRAFT_0124 0.79 +4.3
122,793 - B158DRAFT_0124 0.79 +3.8

Or see this region's nucleotide sequence