Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_976

Experiment: D-Cycloserine 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.125 mg/ml
1,090,972	+				-0.0
1,090,973	-				-0.9
1,090,994	+				-0.7
1,090,994	+				-0.4
1,090,994	+				-0.4
1,090,994	+				-0.2
1,090,994	+				-0.5
1,090,995	-				+0.3
1,090,995	-				-0.3
1,090,995	-				+1.3
1,090,995	-				+0.2
1,090,995	-				+0.9
1,090,995	-				-0.1
1,090,995	-				-0.9
1,091,124	+				+0.4
1,091,125	-				-1.2
1,091,188	+		PfGW456L13_974	0.46	-2.2
1,091,282	+				-0.3
1,091,282	+				-1.3
1,091,283	-				-0.1
1,091,291	+				+0.7
1,091,383	-		PfGW456L13_975	0.30	-0.0
1,091,383	-		PfGW456L13_975	0.30	+0.0
1,091,383	-		PfGW456L13_975	0.30	-0.3
1,091,433	+		PfGW456L13_975	0.49	-0.6
1,091,433	+		PfGW456L13_975	0.49	-1.8
1,091,433	+		PfGW456L13_975	0.49	-1.6
1,091,433	+		PfGW456L13_975	0.49	-0.4
1,091,434	-		PfGW456L13_975	0.49	-1.2
1,091,583	-				-0.8
1,091,630	+				+0.4
1,091,630	+				+0.1
1,091,631	-				-0.7
1,091,646	+				-2.0
1,091,646	+				+0.4
1,091,647	-				-1.1
1,091,647	-				+0.6
1,091,647	-				+0.2
1,091,647	-				+0.9
1,091,647	-				-0.2
1,091,647	-				-0.6
1,091,697	+				+0.5
1,091,697	+				+0.3
1,091,697	+				-0.3
1,091,697	+				-0.0
1,091,697	+				+1.5
1,091,697	+				+0.3
1,091,698	-				+0.8
1,091,698	-				+0.2
1,091,698	-				-0.6
1,091,698	-				-1.4
1,091,732	+				+0.2
1,091,783	+				+0.3
1,091,783	+				+0.1
1,091,784	-				+0.3
1,091,798	-				-0.5
1,091,856	+				-0.2
1,091,857	-				+1.6
1,091,906	+				+0.6
1,091,977	+				-0.6
1,092,024	+				-1.7
1,092,099	+		PfGW456L13_976	0.11	-1.7
1,092,099	+		PfGW456L13_976	0.11	-0.7
1,092,099	+		PfGW456L13_976	0.11	+0.9
1,092,099	+		PfGW456L13_976	0.11	+0.8
1,092,099	+		PfGW456L13_976	0.11	-0.1
1,092,099	+		PfGW456L13_976	0.11	+0.4
1,092,099	+		PfGW456L13_976	0.11	+0.5
1,092,099	+		PfGW456L13_976	0.11	+1.1
1,092,099	+		PfGW456L13_976	0.11	+0.7
1,092,099	+		PfGW456L13_976	0.11	-0.7
1,092,099	+		PfGW456L13_976	0.11	-1.3
1,092,099	+		PfGW456L13_976	0.11	+0.4
1,092,099	+		PfGW456L13_976	0.11	+0.9
1,092,099	+		PfGW456L13_976	0.11	-0.3
1,092,100	-		PfGW456L13_976	0.11	-0.3
1,092,100	-		PfGW456L13_976	0.11	-0.7
1,092,100	-		PfGW456L13_976	0.11	-0.6
1,092,100	-		PfGW456L13_976	0.11	+0.2
1,092,100	-		PfGW456L13_976	0.11	+0.7
1,092,100	-		PfGW456L13_976	0.11	-0.8
1,092,100	-		PfGW456L13_976	0.11	+0.4
1,092,100	-		PfGW456L13_976	0.11	+0.2
1,092,100	-		PfGW456L13_976	0.11	+1.9
1,092,100	-		PfGW456L13_976	0.11	-0.5
1,092,100	-		PfGW456L13_976	0.11	+0.1
1,092,100	-		PfGW456L13_976	0.11	-0.3
1,092,100	-		PfGW456L13_976	0.11	-0.0
1,092,100	-		PfGW456L13_976	0.11	+1.1
1,092,100	-		PfGW456L13_976	0.11	+0.2
1,092,100	-		PfGW456L13_976	0.11	-1.2
1,092,100	-		PfGW456L13_976	0.11	+0.9
1,092,105	+		PfGW456L13_976	0.11	-1.4
1,092,105	+		PfGW456L13_976	0.11	-1.4
1,092,106	-		PfGW456L13_976	0.12	+0.2
1,092,106	-		PfGW456L13_976	0.12	+0.4
1,092,106	-		PfGW456L13_976	0.12	-0.0
1,092,165	+		PfGW456L13_976	0.16	-1.4
1,092,166	-		PfGW456L13_976	0.17	+0.5
1,092,214	+		PfGW456L13_976	0.21	+0.3
1,092,214	+		PfGW456L13_976	0.21	+0.5
1,092,214	+		PfGW456L13_976	0.21	-1.3
1,092,214	+		PfGW456L13_976	0.21	+0.5
1,092,215	-		PfGW456L13_976	0.21	+1.2
1,092,215	-		PfGW456L13_976	0.21	-0.5
1,092,216	+		PfGW456L13_976	0.21	+0.8
1,092,216	+		PfGW456L13_976	0.21	-0.5
1,092,216	+		PfGW456L13_976	0.21	-1.4
1,092,216	+		PfGW456L13_976	0.21	+2.6
1,092,216	+		PfGW456L13_976	0.21	-0.1
1,092,216	+		PfGW456L13_976	0.21	-0.3
1,092,217	-		PfGW456L13_976	0.21	-0.4
1,092,217	-		PfGW456L13_976	0.21	+0.3
1,092,217	-		PfGW456L13_976	0.21	-1.1
1,092,228	+		PfGW456L13_976	0.22	-0.0
1,092,228	+		PfGW456L13_976	0.22	-0.5
1,092,228	+		PfGW456L13_976	0.22	-0.2
1,092,228	+		PfGW456L13_976	0.22	-0.2
1,092,228	+		PfGW456L13_976	0.22	+1.3
1,092,228	+		PfGW456L13_976	0.22	-0.1
1,092,228	+		PfGW456L13_976	0.22	-0.8
1,092,229	-		PfGW456L13_976	0.22	+0.4
1,092,229	-		PfGW456L13_976	0.22	+0.4
1,092,229	-		PfGW456L13_976	0.22	-0.5
1,092,229	-		PfGW456L13_976	0.22	+0.1
1,092,229	-		PfGW456L13_976	0.22	+0.4
1,092,229	-		PfGW456L13_976	0.22	-0.4
1,092,229	-		PfGW456L13_976	0.22	-0.4
1,092,229	-		PfGW456L13_976	0.22	+0.2
1,092,229	-		PfGW456L13_976	0.22	-0.2
1,092,229	-		PfGW456L13_976	0.22	-1.1
1,092,262	+		PfGW456L13_976	0.25	+0.1
1,092,262	+		PfGW456L13_976	0.25	+1.4
1,092,263	-		PfGW456L13_976	0.25	-1.0
1,092,324	+		PfGW456L13_976	0.30	-0.9
1,092,325	-		PfGW456L13_976	0.30	+0.1
1,092,325	-		PfGW456L13_976	0.30	-0.8
1,092,325	-		PfGW456L13_976	0.30	+2.3
1,092,325	-		PfGW456L13_976	0.30	-0.9
1,092,349	+		PfGW456L13_976	0.32	+1.0
1,092,349	+		PfGW456L13_976	0.32	+1.0
1,092,350	-		PfGW456L13_976	0.32	+0.5
1,092,365	+		PfGW456L13_976	0.33	-0.6
1,092,377	+		PfGW456L13_976	0.34	+1.5
1,092,377	+		PfGW456L13_976	0.34	-1.0
1,092,377	+		PfGW456L13_976	0.34	-0.9
1,092,377	+		PfGW456L13_976	0.34	+0.2
1,092,378	-		PfGW456L13_976	0.34	+0.4
1,092,378	-		PfGW456L13_976	0.34	+0.7
1,092,384	+		PfGW456L13_976	0.35	+0.1
1,092,384	+		PfGW456L13_976	0.35	+0.1
1,092,384	+		PfGW456L13_976	0.35	-0.7
1,092,384	+		PfGW456L13_976	0.35	-0.6
1,092,385	-		PfGW456L13_976	0.35	+0.5
1,092,385	-		PfGW456L13_976	0.35	-0.1
1,092,385	-		PfGW456L13_976	0.35	+1.2
1,092,385	-		PfGW456L13_976	0.35	+0.6
1,092,398	+		PfGW456L13_976	0.36	-0.0
1,092,464	+		PfGW456L13_976	0.41	+1.4
1,092,465	-		PfGW456L13_976	0.42	-1.2
1,092,478	+		PfGW456L13_976	0.43	-0.2
1,092,589	+		PfGW456L13_976	0.52	-1.1
1,092,589	+		PfGW456L13_976	0.52	+0.7
1,092,590	-		PfGW456L13_976	0.52	-0.1
1,092,590	-		PfGW456L13_976	0.52	+0.6
1,092,592	+		PfGW456L13_976	0.52	+1.4
1,092,592	+		PfGW456L13_976	0.52	-1.3
1,092,592	+		PfGW456L13_976	0.52	-0.5
1,092,592	+		PfGW456L13_976	0.52	-0.6
1,092,592	+		PfGW456L13_976	0.52	-0.3
1,092,592	+		PfGW456L13_976	0.52	+0.2
1,092,593	-		PfGW456L13_976	0.52	-0.2
1,092,593	-		PfGW456L13_976	0.52	+0.5
1,092,593	-		PfGW456L13_976	0.52	+0.4
1,092,593	-		PfGW456L13_976	0.52	-0.7
1,092,638	+		PfGW456L13_976	0.56	-0.9
1,092,638	+		PfGW456L13_976	0.56	-1.1
1,092,639	-		PfGW456L13_976	0.56	+0.3
1,092,725	+		PfGW456L13_976	0.63	+0.1
1,092,725	+		PfGW456L13_976	0.63	-0.6
1,092,725	+		PfGW456L13_976	0.63	-1.0
1,092,725	+		PfGW456L13_976	0.63	+0.1
1,092,725	+		PfGW456L13_976	0.63	+0.3
1,092,726	-		PfGW456L13_976	0.63	+0.5
1,092,726	-		PfGW456L13_976	0.63	+0.4
1,092,728	+		PfGW456L13_976	0.63	-1.2
1,092,729	-		PfGW456L13_976	0.64	-0.1
1,092,829	+		PfGW456L13_976	0.72	-0.5
1,092,830	-		PfGW456L13_976	0.72	+0.5
1,092,830	-		PfGW456L13_976	0.72	+0.9
1,092,882	+		PfGW456L13_976	0.76	+0.9
1,092,883	-		PfGW456L13_976	0.76	-0.5
1,092,927	+		PfGW456L13_976	0.80	-0.0
1,092,927	+		PfGW456L13_976	0.80	+0.3
1,092,949	+		PfGW456L13_976	0.82	+0.9
1,093,086	+				+0.4
1,093,087	-				+0.9
1,093,087	-				-0.2
1,093,139	-				-0.6
1,093,148	+				+0.6
1,093,149	-				+1.7
1,093,217	+				-2.3
1,093,218	-				+1.4
1,093,220	+				-1.2
1,093,220	+				+0.6
1,093,221	-				+0.3
1,093,221	-				+0.3
1,093,221	-				+0.9
1,093,221	-				-0.4
1,093,221	-				-0.5
1,093,239	+				+0.9
1,093,239	+				-0.2
1,093,239	+				+0.5
1,093,240	-				+0.8
1,093,256	+				-0.4
1,093,256	+				-0.0
1,093,256	+				-0.3
1,093,257	-				+0.0
1,093,284	-				+0.3
1,093,298	+				+0.3
1,093,367	-				+0.8
1,093,400	+				-0.4
1,093,400	+				+0.9
1,093,400	+				-0.0
1,093,400	+				+0.5
1,093,418	+				+0.7
1,093,418	+				-0.1
1,093,418	+				+0.5
1,093,419	-				-0.9
1,093,419	-				+0.2
1,093,443	+				-0.3
1,093,443	+				-0.8
1,093,443	+				-0.0
1,093,443	+				+1.3
1,093,443	+				-0.3
1,093,443	+				+1.0
1,093,443	+				+2.0
1,093,444	-				-0.1
1,093,444	-				-0.8
1,093,444	-				-0.9
1,093,444	-				-0.4
1,093,444	-				+0.2
1,093,444	-				+1.3
1,093,444	-				-2.3
1,093,458	-				-0.3
1,093,458	-				-0.1
1,093,517	-				-1.2
1,093,517	-				-0.7
1,093,528	-				+0.6
1,093,925	+		PfGW456L13_977	0.42	-0.3
1,093,926	-		PfGW456L13_977	0.43	+0.6
1,093,931	+		PfGW456L13_977	0.43	-0.0
1,093,931	+		PfGW456L13_977	0.43	-0.3
1,093,932	-		PfGW456L13_977	0.43	+1.3
1,093,932	-		PfGW456L13_977	0.43	-0.3
1,093,942	+		PfGW456L13_977	0.44	-0.0
1,093,943	-		PfGW456L13_977	0.44	-0.2
1,093,961	+		PfGW456L13_977	0.45	-1.5
1,093,961	+		PfGW456L13_977	0.45	-1.2
1,093,962	-		PfGW456L13_977	0.46	+0.6
1,093,962	-		PfGW456L13_977	0.46	+0.8
1,093,962	-		PfGW456L13_977	0.46	+0.5
1,093,962	-		PfGW456L13_977	0.46	+0.7
1,093,962	-		PfGW456L13_977	0.46	+0.9
1,093,998	-		PfGW456L13_977	0.49	+0.1
1,094,102	+		PfGW456L13_977	0.57	+0.6
1,094,103	-		PfGW456L13_977	0.57	+0.6