Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4498

Experiment: D-Cycloserine 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.125 mg/ml
5,024,206	+		PfGW456L13_4497	0.53	+1.5
5,024,207	-		PfGW456L13_4497	0.53	+1.1
5,024,234	-		PfGW456L13_4497	0.54	-0.3
5,024,285	+		PfGW456L13_4497	0.57	-0.3
5,024,285	+		PfGW456L13_4497	0.57	+1.4
5,024,286	-		PfGW456L13_4497	0.58	-0.7
5,024,286	-		PfGW456L13_4497	0.58	+0.6
5,024,286	-		PfGW456L13_4497	0.58	+0.2
5,024,286	-		PfGW456L13_4497	0.58	-2.8
5,024,286	-		PfGW456L13_4497	0.58	-0.1
5,024,413	-		PfGW456L13_4497	0.65	-1.8
5,024,413	-		PfGW456L13_4497	0.65	-0.8
5,024,413	-		PfGW456L13_4497	0.65	-0.8
5,024,413	-		PfGW456L13_4497	0.65	-1.7
5,024,413	-		PfGW456L13_4497	0.65	+0.0
5,024,413	-		PfGW456L13_4497	0.65	+1.1
5,024,413	-		PfGW456L13_4497	0.65	+0.2
5,024,413	-		PfGW456L13_4497	0.65	-1.3
5,024,478	+		PfGW456L13_4497	0.69	+1.0
5,024,478	+		PfGW456L13_4497	0.69	+1.2
5,024,479	-		PfGW456L13_4497	0.69	+0.6
5,024,479	-		PfGW456L13_4497	0.69	+0.5
5,024,479	-		PfGW456L13_4497	0.69	-0.0
5,024,731	-		PfGW456L13_4497	0.84	-1.2
5,024,910	+				-0.1
5,024,910	+				+0.2
5,024,910	+				+0.1
5,024,911	-				+0.2
5,024,990	-				-0.6
5,025,105	+				-1.0
5,025,193	+				-0.5
5,025,262	+				-0.6
5,025,262	+				-0.9
5,025,263	-				+0.4
5,025,263	-				-1.0
5,025,370	+		PfGW456L13_4498	0.14	-0.4
5,025,549	+		PfGW456L13_4498	0.27	-0.3
5,025,577	+		PfGW456L13_4498	0.29	+0.4
5,025,577	+		PfGW456L13_4498	0.29	-0.0
5,025,577	+		PfGW456L13_4498	0.29	+0.3
5,025,577	+		PfGW456L13_4498	0.29	+1.1
5,025,577	+		PfGW456L13_4498	0.29	-1.3
5,025,577	+		PfGW456L13_4498	0.29	-0.4
5,025,577	+		PfGW456L13_4498	0.29	-0.9
5,025,577	+		PfGW456L13_4498	0.29	+0.3
5,025,578	-		PfGW456L13_4498	0.29	+2.6
5,025,578	-		PfGW456L13_4498	0.29	+0.5
5,025,578	-		PfGW456L13_4498	0.29	-0.4
5,025,578	-		PfGW456L13_4498	0.29	+1.2
5,025,647	+		PfGW456L13_4498	0.34	-1.0
5,025,647	+		PfGW456L13_4498	0.34	-0.3
5,025,647	+		PfGW456L13_4498	0.34	-0.7
5,025,647	+		PfGW456L13_4498	0.34	+0.5
5,025,647	+		PfGW456L13_4498	0.34	-0.0
5,025,648	-		PfGW456L13_4498	0.34	+0.1
5,025,844	+		PfGW456L13_4498	0.48	+1.5
5,025,844	+		PfGW456L13_4498	0.48	-1.5
5,025,844	+		PfGW456L13_4498	0.48	-2.1
5,025,844	+		PfGW456L13_4498	0.48	-0.6
5,025,844	+		PfGW456L13_4498	0.48	-0.1
5,025,844	+		PfGW456L13_4498	0.48	-1.0
5,025,844	+		PfGW456L13_4498	0.48	+1.1
5,025,845	-		PfGW456L13_4498	0.48	+1.4
5,025,845	-		PfGW456L13_4498	0.48	-0.2
5,025,850	-		PfGW456L13_4498	0.49	-0.3
5,025,850	-		PfGW456L13_4498	0.49	-0.8
5,025,870	+		PfGW456L13_4498	0.50	-1.2
5,025,870	+		PfGW456L13_4498	0.50	+0.6
5,025,870	+		PfGW456L13_4498	0.50	-1.3
5,025,871	-		PfGW456L13_4498	0.50	+1.2
5,025,970	+		PfGW456L13_4498	0.57	+0.1
5,025,970	+				+1.0
5,025,970	+		PfGW456L13_4498	0.57	+2.0
5,025,970	+		PfGW456L13_4498	0.57	-0.0
5,025,971	-		PfGW456L13_4498	0.57	+0.2
5,026,011	+		PfGW456L13_4498	0.60	+0.2
5,026,018	+		PfGW456L13_4498	0.61	+0.1
5,026,018	+		PfGW456L13_4498	0.61	-0.3
5,026,105	+				+0.4
5,026,106	-		PfGW456L13_4498	0.67	+0.3
5,026,106	-		PfGW456L13_4498	0.67	-1.2
5,026,106	-		PfGW456L13_4498	0.67	-0.4
5,026,106	-		PfGW456L13_4498	0.67	+0.5
5,026,106	-		PfGW456L13_4498	0.67	+0.1
5,026,138	+		PfGW456L13_4498	0.69	-1.3
5,026,139	-		PfGW456L13_4498	0.70	-0.0
5,026,139	-		PfGW456L13_4498	0.70	-0.1
5,026,196	+		PfGW456L13_4498	0.74	+0.5
5,026,197	-		PfGW456L13_4498	0.74	+0.8
5,026,197	-		PfGW456L13_4498	0.74	-0.2
5,026,268	+		PfGW456L13_4498	0.79	-1.3
5,026,268	+		PfGW456L13_4498	0.79	+0.4
5,026,268	+		PfGW456L13_4498	0.79	+0.4
5,026,405	+		PfGW456L13_4498	0.89	+0.6
5,026,405	+		PfGW456L13_4498	0.89	-0.3
5,026,405	+		PfGW456L13_4498	0.89	+0.4
5,026,405	+		PfGW456L13_4498	0.89	+1.8
5,026,405	+		PfGW456L13_4498	0.89	+2.4
5,026,406	-		PfGW456L13_4498	0.89	+0.3
5,026,406	-		PfGW456L13_4498	0.89	+1.5
5,026,406	-		PfGW456L13_4498	0.89	-0.0
5,026,406	-		PfGW456L13_4498	0.89	+0.8
5,026,610	+				-0.2
5,026,635	+				-0.0
5,026,635	+				-0.6
5,026,635	+				+1.4
5,026,635	+				-0.1
5,026,827	-				+0.3
5,026,827	-				-0.1
5,026,874	+				-0.3
5,026,874	+				+0.8
5,026,874	+				+0.6
5,026,874	+				+0.6
5,026,875	-				-0.9
5,026,875	-				-0.0
5,026,875	-				-0.7
5,026,875	-				+0.5
5,027,040	-				+0.6
5,027,040	-				+0.4
5,027,040	-				-0.5
5,027,299	+		PfGW456L13_4499	0.17	+0.5
5,027,299	+		PfGW456L13_4499	0.17	-1.8
5,027,299	+		PfGW456L13_4499	0.17	-0.1
5,027,300	-		PfGW456L13_4499	0.17	+1.1
5,027,458	+		PfGW456L13_4499	0.31	+0.2
5,027,458	+		PfGW456L13_4499	0.31	-0.9
5,027,458	+		PfGW456L13_4499	0.31	-0.0
5,027,458	+		PfGW456L13_4499	0.31	+1.2
5,027,459	-		PfGW456L13_4499	0.31	+1.0
5,027,479	-		PfGW456L13_4499	0.33	-0.9
5,027,543	+		PfGW456L13_4499	0.39	+1.6
5,027,559	-		PfGW456L13_4499	0.40	-0.3