Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_4044

Experiment: D-Cycloserine 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.125 mg/ml
4,536,499	-		PfGW456L13_4042	0.41	+0.8
4,536,527	+		PfGW456L13_4042	0.48	-0.2
4,536,528	-		PfGW456L13_4042	0.48	-1.3
4,536,762	+				+0.8
4,536,762	+				+1.8
4,536,763	-				+0.4
4,536,763	-				+1.1
4,536,763	-				-0.6
4,536,763	-				-0.7
4,536,763	-				-0.3
4,536,763	-				+0.1
4,536,768	+				+1.1
4,536,769	-				-0.9
4,536,769	-				+1.1
4,536,830	+				-0.0
4,536,830	+				+0.5
4,536,830	+				-0.9
4,536,830	+				+0.0
4,536,830	+				-2.9
4,536,830	+				+0.4
4,536,830	+				-0.4
4,536,830	+				+0.3
4,536,830	+				+0.0
4,536,830	+				-1.5
4,536,830	+				-0.1
4,536,830	+				-1.4
4,536,831	-				-0.7
4,536,831	-				-2.2
4,536,831	-				-0.3
4,536,831	-				+0.3
4,536,831	-				+0.0
4,536,831	-				+0.5
4,536,831	-				-3.9
4,536,831	-				-0.4
4,536,831	-				+0.0
4,536,834	+				+0.1
4,536,834	+				+0.8
4,536,834	+				-0.7
4,536,834	+				+0.4
4,536,835	-				-0.0
4,536,835	-				-1.2
4,536,835	-				+1.3
4,536,835	-				+0.1
4,536,835	-				-0.4
4,536,835	-				+0.8
4,536,835	-				-0.3
4,536,835	-				-1.5
4,536,840	+				+0.4
4,536,840	+				+0.2
4,536,841	-				-0.7
4,536,841	-				-0.2
4,536,841	-				-0.0
4,536,873	+				+0.3
4,536,873	+				+1.3
4,536,873	+				-0.0
4,536,874	-				+0.4
4,536,874	-				+0.2
4,536,874	-				-0.3
4,536,882	-				+0.0
4,536,882	-				-1.3
4,536,882	-				-0.7
4,536,895	+				+0.3
4,536,895	+				+1.6
4,536,895	+				-0.1
4,536,895	+				-0.7
4,536,895	+				-1.5
4,536,895	+				-1.5
4,536,896	-				+1.3
4,537,096	-		PfGW456L13_4043	0.52	+0.1
4,537,117	-		PfGW456L13_4043	0.57	-0.0
4,537,131	+		PfGW456L13_4043	0.60	-0.9
4,537,131	+		PfGW456L13_4043	0.60	-1.5
4,537,132	-		PfGW456L13_4043	0.60	-0.0
4,537,322	-				-0.0
4,537,322	-				+0.8
4,537,415	+				+1.2
4,537,594	+				+0.1
4,537,594	+				-0.0
4,537,594	+				-1.2
4,537,594	+				+1.8
4,537,693	+		PfGW456L13_4044	0.11	-1.0
4,537,694	-		PfGW456L13_4044	0.11	+0.2
4,537,861	+		PfGW456L13_4044	0.19	+0.5
4,537,898	+		PfGW456L13_4044	0.21	+1.5
4,537,899	-		PfGW456L13_4044	0.21	-0.0
4,537,899	-		PfGW456L13_4044	0.21	+0.4
4,537,899	-		PfGW456L13_4044	0.21	-0.1
4,537,899	-		PfGW456L13_4044	0.21	+0.3
4,537,899	-		PfGW456L13_4044	0.21	+0.8
4,537,899	-		PfGW456L13_4044	0.21	-0.0
4,537,948	-		PfGW456L13_4044	0.24	+0.4
4,538,149	+		PfGW456L13_4044	0.34	-0.4
4,538,149	+		PfGW456L13_4044	0.34	+0.7
4,538,260	+		PfGW456L13_4044	0.40	+0.4
4,538,375	+		PfGW456L13_4044	0.46	-0.6
4,538,463	+		PfGW456L13_4044	0.51	+0.9
4,538,463	+		PfGW456L13_4044	0.51	-1.5
4,538,464	-		PfGW456L13_4044	0.51	-0.0
4,538,565	+		PfGW456L13_4044	0.56	-0.3
4,538,565	+		PfGW456L13_4044	0.56	+0.4
4,538,565	+		PfGW456L13_4044	0.56	-0.1
4,538,566	-		PfGW456L13_4044	0.56	-0.6
4,538,566	-		PfGW456L13_4044	0.56	+0.0
4,538,566	-		PfGW456L13_4044	0.56	+0.6
4,538,707	+		PfGW456L13_4044	0.63	-0.2
4,538,707	+		PfGW456L13_4044	0.63	+1.0
4,538,707	+		PfGW456L13_4044	0.63	+0.8
4,539,366	-				-0.2
4,539,366	-				-0.1
4,539,440	+				+0.6
4,539,440	+				+0.3
4,539,482	+				-1.1
4,539,483	-				+0.1
4,539,483	-				-0.9
4,539,558	+				-0.5
4,539,558	+				-0.4
4,539,559	-				-1.5
4,539,559	-				-0.4
4,539,563	+				-0.2
4,539,563	+				-0.7
4,539,563	+				+0.1
4,539,563	+				+0.8
4,539,563	+				-2.5
4,539,563	+				+0.8
4,539,563	+				-0.2
4,539,563	+				-0.5
4,539,564	-				-0.7
4,539,564	-				+0.3
4,539,564	-				+0.3
4,539,664	-				+0.4
4,539,722	+				-0.7
4,539,725	+				+0.2
4,539,725	+				-0.9
4,539,725	+				+0.8
4,539,725	+				+0.7
4,539,725	+				-1.2
4,539,726	-				-0.6
4,539,726	-				-0.2
4,539,770	+				+0.8
4,539,770	+				+0.1
4,539,771	-				-0.9
4,539,801	-				+0.4
4,539,815	+				+1.1
4,539,815	+				+0.2
4,539,815	+				+0.4
4,539,816	-				+0.9
4,539,977	+		PfGW456L13_4045	0.18	-1.0
4,539,977	+		PfGW456L13_4045	0.18	-0.2
4,539,977	+		PfGW456L13_4045	0.18	+0.0
4,539,978	-		PfGW456L13_4045	0.18	+1.0
4,539,978	-		PfGW456L13_4045	0.18	-0.5
4,539,978	-		PfGW456L13_4045	0.18	-1.2
4,539,980	+		PfGW456L13_4045	0.18	-2.2
4,539,981	-		PfGW456L13_4045	0.18	-0.1
4,539,981	-		PfGW456L13_4045	0.18	-0.1
4,539,981	-		PfGW456L13_4045	0.18	+0.3
4,539,981	-		PfGW456L13_4045	0.18	+0.2
4,539,981	-		PfGW456L13_4045	0.18	+1.2
4,539,981	-		PfGW456L13_4045	0.18	-1.0
4,539,981	-		PfGW456L13_4045	0.18	+0.5
4,540,028	+		PfGW456L13_4045	0.21	-0.0
4,540,029	-		PfGW456L13_4045	0.21	+0.7
4,540,093	+		PfGW456L13_4045	0.24	+0.3
4,540,205	+		PfGW456L13_4045	0.30	-2.5
4,540,205	+		PfGW456L13_4045	0.30	-0.4
4,540,205	+		PfGW456L13_4045	0.30	+0.0
4,540,205	+		PfGW456L13_4045	0.30	-0.7
4,540,205	+		PfGW456L13_4045	0.30	+2.7
4,540,205	+		PfGW456L13_4045	0.30	+0.0
4,540,205	+		PfGW456L13_4045	0.30	-1.4
4,540,206	-		PfGW456L13_4045	0.30	+0.4
4,540,206	-		PfGW456L13_4045	0.30	+2.0