Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_3471

Experiment: D-Cycloserine 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.125 mg/ml
3,897,529	-				+2.2
3,897,529	-		PfGW456L13_3470	0.52	-0.3
3,897,529	-		PfGW456L13_3470	0.52	+3.2
3,897,529	-		PfGW456L13_3470	0.52	-0.2
3,897,713	-		PfGW456L13_3470	0.63	+1.1
3,897,871	+		PfGW456L13_3470	0.73	-0.6
3,897,872	-		PfGW456L13_3470	0.73	+0.1
3,897,872	-		PfGW456L13_3470	0.73	-0.3
3,897,872	-		PfGW456L13_3470	0.73	+1.1
3,898,046	+		PfGW456L13_3470	0.83	+1.5
3,898,264	+				-1.3
3,898,264	+				+0.7
3,898,265	-				-0.1
3,898,265	-				+1.1
3,898,302	-				-1.0
3,898,344	+				+0.2
3,898,421	+				+1.2
3,898,422	-				+0.3
3,898,422	-				+0.1
3,898,434	+				+1.2
3,898,435	-				-0.1
3,898,460	+				-0.2
3,898,460	+				+0.7
3,898,461	-				+0.7
3,898,461	-				+1.1
3,898,468	+				-0.3
3,898,527	+				+1.2
3,898,527	+				-0.3
3,898,528	-				-0.7
3,898,528	-				+1.0
3,898,528	-				-0.5
3,898,528	-				+1.3
3,898,528	-				+1.9
3,898,528	-				-1.3
3,898,528	-				+0.7
3,898,528	-				-0.3
3,898,531	+				+1.4
3,898,532	-				+1.2
3,898,605	+				+0.2
3,898,605	+				-1.8
3,898,605	+				+0.1
3,898,605	+				-2.3
3,898,605	+				+1.5
3,898,606	-				+0.7
3,898,606	-				-0.8
3,898,606	-				+1.0
3,898,606	-				+1.2
3,898,606	-				-0.3
3,898,606	-				+0.2
3,898,606	-				+0.7
3,898,837	-		PfGW456L13_3471	0.22	+0.7
3,898,837	-		PfGW456L13_3471	0.22	-0.3
3,898,837	-		PfGW456L13_3471	0.22	-0.7
3,898,866	+		PfGW456L13_3471	0.24	-0.3
3,899,017	+		PfGW456L13_3471	0.34	-1.5
3,899,018	-		PfGW456L13_3471	0.34	-1.3
3,899,125	+		PfGW456L13_3471	0.40	+0.7
3,899,171	-		PfGW456L13_3471	0.43	+1.2
3,899,366	+		PfGW456L13_3471	0.55	-1.5
3,899,366	+		PfGW456L13_3471	0.55	+0.8
3,899,517	+		PfGW456L13_3471	0.65	+1.3
3,899,518	-		PfGW456L13_3471	0.65	-0.1
3,899,518	-		PfGW456L13_3471	0.65	-0.0
3,899,549	-		PfGW456L13_3471	0.67	-0.2
3,899,673	+		PfGW456L13_3471	0.74	-0.8
3,899,673	+		PfGW456L13_3471	0.74	+0.5
3,899,673	+		PfGW456L13_3471	0.74	+0.1
3,899,673	+		PfGW456L13_3471	0.74	-0.5
3,899,674	-		PfGW456L13_3471	0.74	-0.9
3,899,674	-		PfGW456L13_3471	0.74	-0.3
3,899,776	-		PfGW456L13_3471	0.81	+0.1
3,899,850	+		PfGW456L13_3471	0.85	-1.7
3,899,851	-		PfGW456L13_3471	0.85	-0.1
3,899,892	+		PfGW456L13_3471	0.88	+0.9
3,899,956	-				+0.7
3,900,091	-				-0.5
3,900,128	-				-0.5
3,900,249	-				-0.5
3,900,249	-				+0.1
3,900,287	+				+0.5
3,900,515	+		PfGW456L13_3472	0.30	-0.1
3,900,939	-		PfGW456L13_3472	0.82	-1.1
3,900,939	-		PfGW456L13_3472	0.82	-0.5