Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_2119

Experiment: D-Cycloserine 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.125 mg/ml
2,322,676	+		PfGW456L13_2118	0.61	+0.4
2,322,676	+				-1.6
2,322,677	-		PfGW456L13_2118	0.61	+0.9
2,322,837	+		PfGW456L13_2118	0.79	+1.5
2,322,916	+		PfGW456L13_2118	0.88	+0.8
2,322,916	+		PfGW456L13_2118	0.88	+1.0
2,322,916	+		PfGW456L13_2118	0.88	-0.1
2,322,916	+		PfGW456L13_2118	0.88	+0.0
2,322,916	+		PfGW456L13_2118	0.88	-0.3
2,322,917	-		PfGW456L13_2118	0.88	+0.3
2,322,917	-		PfGW456L13_2118	0.88	+1.1
2,322,917	-		PfGW456L13_2118	0.88	-2.0
2,322,917	-		PfGW456L13_2118	0.88	-1.9
2,322,917	-		PfGW456L13_2118	0.88	+0.6
2,322,917	-		PfGW456L13_2118	0.88	+0.3
2,323,039	+				-0.2
2,323,039	+				+0.4
2,323,039	+				+0.4
2,323,039	+				-0.9
2,323,039	+				-1.3
2,323,039	+				-2.2
2,323,040	-				-0.1
2,323,040	-				-0.3
2,323,043	+				+0.4
2,323,044	-				+0.2
2,323,044	-				-0.1
2,323,044	-				+0.2
2,323,044	-				-0.8
2,323,045	+				-0.1
2,323,045	+				-2.2
2,323,045	+				+0.6
2,323,045	+				-0.8
2,323,045	+				+2.1
2,323,045	+				+1.6
2,323,045	+				+1.0
2,323,046	-				-0.1
2,323,046	-				+0.1
2,323,047	+				-0.7
2,323,047	+				+0.1
2,323,047	+				+1.0
2,323,047	+				+0.1
2,323,047	+				-0.5
2,323,047	+				-0.3
2,323,047	+				-0.8
2,323,047	+				+0.7
2,323,047	+				+0.3
2,323,047	+				-0.4
2,323,048	-				+1.8
2,323,048	-				-0.6
2,323,048	-				-0.5
2,323,048	-				-0.6
2,323,048	-				+0.8
2,323,048	-				-0.2
2,323,048	-				+0.3
2,323,048	-				-0.6
2,323,048	-				-0.4
2,323,049	+				+0.3
2,323,049	+				+0.0
2,323,049	+				+1.0
2,323,050	-				+0.9
2,323,050	-				+1.0
2,323,050	-				-0.4
2,323,050	-				-1.2
2,323,050	-				+1.0
2,323,050	-				+0.3
2,323,050	-				+0.8
2,323,075	+				-1.8
2,323,075	+				-0.8
2,323,075	+				-0.7
2,323,076	-				+0.9
2,323,076	-				+0.9
2,323,076	-				+0.4
2,323,078	-				-0.2
2,323,094	+				-1.1
2,323,094	+				+0.2
2,323,094	+				-0.6
2,323,094	+				-2.2
2,323,094	+				-0.2
2,323,094	+				-0.4
2,323,094	+				-1.1
2,323,094	+				-1.1
2,323,094	+				+1.2
2,323,094	+				+0.9
2,323,094	+				+0.6
2,323,095	-				-0.2
2,323,095	-				-0.6
2,323,095	-				+0.0
2,323,095	-				+0.1
2,323,111	-				-1.3
2,323,389	+		PfGW456L13_2119	0.12	+0.0
2,323,622	+		PfGW456L13_2119	0.40	+0.6
2,323,622	+		PfGW456L13_2119	0.40	-0.1
2,323,622	+		PfGW456L13_2119	0.40	-1.5
2,323,622	+		PfGW456L13_2119	0.40	+0.5
2,323,622	+		PfGW456L13_2119	0.40	-1.0
2,323,622	+		PfGW456L13_2119	0.40	-0.5
2,323,623	-		PfGW456L13_2119	0.40	-0.3
2,323,623	-		PfGW456L13_2119	0.40	+1.0
2,323,855	+		PfGW456L13_2119	0.68	-0.6
2,323,856	-		PfGW456L13_2119	0.69	-1.6
2,323,856	-		PfGW456L13_2119	0.69	+0.5
2,323,897	+		PfGW456L13_2119	0.74	-0.5
2,323,897	+		PfGW456L13_2119	0.74	+0.3
2,323,898	-		PfGW456L13_2119	0.74	+0.1
2,323,924	+				-1.3
2,324,101	+				+0.3
2,324,101	+				-0.1
2,324,101	+				-1.1
2,324,101	+				+0.7
2,324,102	-				+1.0
2,324,139	-				+0.4
2,324,202	+				-0.2
2,324,238	+				-0.4
2,324,254	+				+0.2
2,324,254	+				-1.2
2,324,255	-				+0.2
2,324,255	-				-0.3
2,324,654	+		PfGW456L13_2120	0.40	+1.1
2,324,655	-		PfGW456L13_2120	0.40	-0.4
2,324,695	+		PfGW456L13_2120	0.44	+0.7
2,324,695	+				-0.6
2,324,695	+		PfGW456L13_2120	0.44	+0.1
2,324,696	-		PfGW456L13_2120	0.44	-0.1
2,324,696	-				+0.7
2,324,747	+		PfGW456L13_2120	0.49	+0.5
2,324,747	+		PfGW456L13_2120	0.49	-2.7
2,324,747	+		PfGW456L13_2120	0.49	-0.2
2,324,747	+		PfGW456L13_2120	0.49	+0.4
2,324,747	+		PfGW456L13_2120	0.49	+0.2
2,324,747	+		PfGW456L13_2120	0.49	+0.4
2,324,747	+		PfGW456L13_2120	0.49	+0.5
2,324,748	-		PfGW456L13_2120	0.49	-0.3
2,324,748	-		PfGW456L13_2120	0.49	-0.1
2,324,748	-		PfGW456L13_2120	0.49	+0.3
2,324,748	-		PfGW456L13_2120	0.49	+0.9
2,324,748	-		PfGW456L13_2120	0.49	-1.5
2,324,748	-		PfGW456L13_2120	0.49	+0.4
2,324,748	-		PfGW456L13_2120	0.49	+0.2
2,324,748	-		PfGW456L13_2120	0.49	+1.1
2,324,748	-		PfGW456L13_2120	0.49	-1.7
2,324,748	-		PfGW456L13_2120	0.49	+0.3
2,324,765	+		PfGW456L13_2120	0.51	+0.0
2,324,765	+		PfGW456L13_2120	0.51	-0.6
2,324,765	+		PfGW456L13_2120	0.51	-0.6
2,324,766	-		PfGW456L13_2120	0.51	+0.4
2,324,766	-		PfGW456L13_2120	0.51	+0.7
2,324,766	-		PfGW456L13_2120	0.51	+0.6
2,325,087	-		PfGW456L13_2120	0.83	-0.1