Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1592

Experiment: D-Cycloserine 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.125 mg/ml
1,755,239	-		PfGW456L13_1591	0.29	-0.1
1,755,304	+		PfGW456L13_1591	0.36	+0.8
1,755,304	+		PfGW456L13_1591	0.36	+0.2
1,755,305	-		PfGW456L13_1591	0.36	+0.2
1,755,305	-		PfGW456L13_1591	0.36	-0.3
1,755,334	+		PfGW456L13_1591	0.39	+0.2
1,755,335	-		PfGW456L13_1591	0.39	+0.4
1,755,335	-		PfGW456L13_1591	0.39	+0.5
1,755,335	-				-1.5
1,755,391	-		PfGW456L13_1591	0.45	+0.2
1,755,514	+		PfGW456L13_1591	0.58	+0.9
1,755,515	-		PfGW456L13_1591	0.58	+0.6
1,755,515	-		PfGW456L13_1591	0.58	+0.6
1,755,515	-		PfGW456L13_1591	0.58	-0.2
1,755,559	+		PfGW456L13_1591	0.63	+0.7
1,755,560	-		PfGW456L13_1591	0.63	-0.8
1,755,560	-		PfGW456L13_1591	0.63	+0.5
1,755,610	+		PfGW456L13_1591	0.68	+0.1
1,755,652	+		PfGW456L13_1591	0.72	+0.5
1,755,652	+		PfGW456L13_1591	0.72	-0.3
1,755,653	-		PfGW456L13_1591	0.72	-0.2
1,755,799	+		PfGW456L13_1591	0.88	+1.3
1,755,800	-		PfGW456L13_1591	0.88	+1.0
1,755,800	-		PfGW456L13_1591	0.88	-0.3
1,755,850	+				+0.8
1,755,850	+				+1.3
1,755,850	+				+1.3
1,755,850	+				+0.2
1,755,850	+				+0.6
1,755,855	+				+0.5
1,755,855	+				-0.4
1,755,856	-				+1.5
1,755,856	-				-2.1
1,755,942	+				-0.0
1,755,960	+				+0.9
1,755,960	+				+0.7
1,755,961	-				+0.9
1,755,961	-				-0.9
1,755,968	-				-0.2
1,755,978	+				+0.2
1,755,978	+				+0.6
1,755,978	+				-0.4
1,755,979	-				-0.5
1,755,979	-				-1.3
1,755,979	-				-2.5
1,755,979	-				+1.1
1,755,979	-				-0.4
1,755,979	-				-0.8
1,755,992	+				+0.6
1,756,165	+				+0.3
1,756,165	+				+0.7
1,756,165	+				+0.4
1,756,165	+				+1.0
1,756,165	+				-0.1
1,756,166	-				+0.2
1,756,226	-		PfGW456L13_1592	0.16	+0.5
1,756,663	+		PfGW456L13_1592	0.60	+0.8
1,756,663	+		PfGW456L13_1592	0.60	-0.0
1,756,664	-		PfGW456L13_1592	0.60	+0.2
1,756,664	-		PfGW456L13_1592	0.60	+1.2
1,756,664	-		PfGW456L13_1592	0.60	+0.4
1,756,795	+		PfGW456L13_1592	0.73	+0.6
1,756,795	+		PfGW456L13_1592	0.73	+0.8
1,756,795	+		PfGW456L13_1592	0.73	-0.2
1,756,795	+		PfGW456L13_1592	0.73	+1.0
1,756,795	+		PfGW456L13_1592	0.73	+0.1
1,756,795	+		PfGW456L13_1592	0.73	-0.1
1,756,795	+		PfGW456L13_1592	0.73	+0.8
1,756,795	+		PfGW456L13_1592	0.73	-0.3
1,756,795	+		PfGW456L13_1592	0.73	+0.9
1,756,795	+		PfGW456L13_1592	0.73	+0.5
1,756,795	+		PfGW456L13_1592	0.73	+0.0
1,756,796	-		PfGW456L13_1592	0.73	-0.5
1,756,796	-		PfGW456L13_1592	0.73	+0.4
1,756,796	-		PfGW456L13_1592	0.73	-1.1
1,756,796	-		PfGW456L13_1592	0.73	-0.2
1,756,796	-		PfGW456L13_1592	0.73	+1.1
1,756,796	-		PfGW456L13_1592	0.73	+0.3
1,756,796	-		PfGW456L13_1592	0.73	-0.9
1,756,801	+		PfGW456L13_1592	0.74	+0.7
1,756,801	+		PfGW456L13_1592	0.74	+0.1
1,756,801	+		PfGW456L13_1592	0.74	+0.9
1,756,801	+		PfGW456L13_1592	0.74	+1.1
1,756,801	+		PfGW456L13_1592	0.74	+2.5
1,756,801	+		PfGW456L13_1592	0.74	-0.5
1,756,801	+		PfGW456L13_1592	0.74	+0.1
1,756,801	+		PfGW456L13_1592	0.74	-0.4
1,756,802	-		PfGW456L13_1592	0.74	+0.8
1,756,802	-		PfGW456L13_1592	0.74	+0.9
1,756,802	-		PfGW456L13_1592	0.74	-1.3
1,756,802	-		PfGW456L13_1592	0.74	+0.9
1,756,802	-		PfGW456L13_1592	0.74	-0.7
1,756,961	+				-0.7
1,757,045	+				+1.0
1,757,046	-				+0.1
1,757,049	+				+0.1
1,757,049	+				+0.4
1,757,049	+				-0.1
1,757,049	+				+0.2
1,757,050	-				-1.2
1,757,050	-				+0.8
1,757,050	-				-1.4
1,757,050	-				-1.1
1,757,050	-				+0.5
1,757,050	-				-0.0
1,757,050	-				+0.9
1,757,050	-				-0.5
1,757,057	+				+0.5
1,757,058	-				-0.1
1,757,070	+				-0.1
1,757,070	+				+0.1
1,757,070	+				-0.1
1,757,080	+				-0.4
1,757,081	-				-0.2
1,757,087	+				-0.3
1,757,087	+				+0.2
1,757,107	+				+0.8
1,757,125	+				-0.6
1,757,135	-				+0.3
1,757,162	-				-0.0
1,757,162	-				-0.1
1,757,162	-				-0.2
1,757,162	-				+0.1
1,757,187	+				+0.7
1,757,205	-				-0.6
1,757,205	-				-0.5
1,757,207	-				-0.3
1,757,207	-				-0.1
1,757,212	+				-0.1
1,757,212	+				+0.8
1,757,213	-				+0.1
1,757,213	-				-1.1
1,757,217	+		PfGW456L13_1593	0.11	+0.1
1,757,218	-		PfGW456L13_1593	0.12	+0.1
1,757,229	+		PfGW456L13_1593	0.21	+0.7
1,757,229	+		PfGW456L13_1593	0.21	+1.0
1,757,229	+		PfGW456L13_1593	0.21	+0.2
1,757,229	+		PfGW456L13_1593	0.21	+1.2
1,757,229	+		PfGW456L13_1593	0.21	+0.1
1,757,229	+		PfGW456L13_1593	0.21	+1.2
1,757,229	+		PfGW456L13_1593	0.21	+0.6
1,757,229	+		PfGW456L13_1593	0.21	+0.5
1,757,229	+		PfGW456L13_1593	0.21	+0.5
1,757,230	-		PfGW456L13_1593	0.21	-0.9
1,757,230	-		PfGW456L13_1593	0.21	+0.2
1,757,230	-		PfGW456L13_1593	0.21	-0.4
1,757,230	-		PfGW456L13_1593	0.21	-0.3
1,757,230	-		PfGW456L13_1593	0.21	-0.3
1,757,230	-		PfGW456L13_1593	0.21	-0.2
1,757,230	-		PfGW456L13_1593	0.21	-0.4
1,757,230	-		PfGW456L13_1593	0.21	+0.1
1,757,261	+		PfGW456L13_1593	0.46	+1.0
1,757,261	+		PfGW456L13_1593	0.46	+0.4
1,757,261	+		PfGW456L13_1593	0.46	+1.3
1,757,261	+		PfGW456L13_1593	0.46	-0.7
1,757,261	+		PfGW456L13_1593	0.46	+0.9
1,757,261	+		PfGW456L13_1593	0.46	+0.5
1,757,261	+		PfGW456L13_1593	0.46	-0.4
1,757,261	+		PfGW456L13_1593	0.46	-0.9
1,757,261	+		PfGW456L13_1593	0.46	-0.4
1,757,261	+		PfGW456L13_1593	0.46	+0.9
1,757,261	+		PfGW456L13_1593	0.46	+2.2
1,757,261	+		PfGW456L13_1593	0.46	+1.0
1,757,261	+		PfGW456L13_1593	0.46	+1.1
1,757,262	-		PfGW456L13_1593	0.47	+1.4
1,757,262	-		PfGW456L13_1593	0.47	-0.1
1,757,262	-		PfGW456L13_1593	0.47	+0.6
1,757,262	-		PfGW456L13_1593	0.47	-1.1
1,757,262	-		PfGW456L13_1593	0.47	-0.2
1,757,262	-		PfGW456L13_1593	0.47	-0.1
1,757,262	-		PfGW456L13_1593	0.47	-0.9
1,757,262	-		PfGW456L13_1593	0.47	+1.0
1,757,262	-		PfGW456L13_1593	0.47	+0.3
1,757,372	+				-0.0
1,757,372	+				+0.8
1,757,372	+				+0.7
1,757,372	+				+0.1
1,757,372	+				+1.7
1,757,372	+				+0.7
1,757,372	+				-1.0
1,757,602	+		PfGW456L13_1594	0.28	+1.5
1,757,602	+		PfGW456L13_1594	0.28	+0.6
1,757,672	+		PfGW456L13_1594	0.37	+1.1
1,757,672	+		PfGW456L13_1594	0.37	+0.1
1,757,672	-		PfGW456L13_1594	0.37	+1.1
1,757,673	-		PfGW456L13_1594	0.37	-0.7
1,757,673	-		PfGW456L13_1594	0.37	-0.8
1,757,673	-		PfGW456L13_1594	0.37	-0.6
1,757,673	-		PfGW456L13_1594	0.37	-1.4
1,757,673	-		PfGW456L13_1594	0.37	+0.1
1,757,673	-		PfGW456L13_1594	0.37	-0.3
1,757,914	+		PfGW456L13_1594	0.68	+0.2
1,757,915	-		PfGW456L13_1594	0.69	-0.8
1,757,915	-		PfGW456L13_1594	0.69	-2.9
1,757,915	-		PfGW456L13_1594	0.69	-1.8
1,757,915	-		PfGW456L13_1594	0.69	-1.1
1,757,916	+		PfGW456L13_1594	0.69	+0.1
1,757,917	-		PfGW456L13_1594	0.69	-3.3
1,757,917	-		PfGW456L13_1594	0.69	-2.4
1,757,917	-		PfGW456L13_1594	0.69	-2.2
1,757,943	+		PfGW456L13_1594	0.72	+1.3
1,757,944	-		PfGW456L13_1594	0.72	-0.9
1,757,944	-		PfGW456L13_1594	0.72	-1.9