Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1529

Experiment: D-Cycloserine 0.125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Cycloserine 0.125 mg/ml
1,681,696	+				-0.5
1,681,696	+				-0.8
1,681,696	+				-0.4
1,681,696	+				+0.2
1,681,697	-				-1.5
1,681,697	-				+0.3
1,681,697	-				+0.5
1,681,697	-				-0.5
1,681,697	-				-1.3
1,681,697	-				-0.5
1,681,697	-				+0.1
1,681,697	-				+0.4
1,681,700	+				-0.4
1,681,700	+				-1.2
1,681,700	+				-0.7
1,681,700	+				-1.1
1,681,700	+				+0.5
1,681,700	+				-0.2
1,681,701	-				-0.1
1,681,701	-				+0.6
1,681,701	-				+0.4
1,681,726	+				-0.4
1,681,727	-				-0.5
1,681,727	-				-1.6
1,681,820	+				-0.7
1,681,820	+				-0.1
1,681,820	+				-0.4
1,681,820	+				+0.1
1,681,820	+				-1.1
1,681,820	+				+0.5
1,681,915	+				+0.1
1,681,915	+				-2.8
1,681,916	-				-0.2
1,681,916	-				-0.4
1,682,038	+		PfGW456L13_1528	0.28	-2.5
1,682,278	+		PfGW456L13_1528	0.83	-0.5
1,682,278	+		PfGW456L13_1528	0.83	-0.8
1,682,359	+				-3.2
1,682,360	-				-2.3
1,682,371	-				-0.5
1,682,371	-				+1.8
1,682,371	-				-0.2
1,682,470	-				-0.2
1,682,606	+				+0.1
1,682,606	+				+0.7
1,682,606	+				+0.7
1,682,606	+				+0.4
1,682,606	+				-0.1
1,682,606	+				-0.8
1,682,606	+				-1.5
1,682,606	+				-0.1
1,682,607	-				-0.2
1,682,607	-				-1.7
1,682,607	-				-1.1
1,682,607	-				+0.3
1,682,607	-				-1.8
1,682,607	-				+0.8
1,682,626	+				+0.3
1,682,626	+				-0.5
1,682,626	+				+0.4
1,682,627	-				-0.8
1,682,654	+				+0.1
1,682,654	+				+0.6
1,682,655	-				+1.7
1,682,700	+				+0.6
1,682,700	+				+0.6
1,682,701	-				-0.9
1,682,701	-				-0.5
1,682,701	-				-0.8
1,682,931	+		PfGW456L13_1529	0.21	-0.3
1,682,931	+		PfGW456L13_1529	0.21	+2.3
1,682,931	+		PfGW456L13_1529	0.21	+0.3
1,682,931	+		PfGW456L13_1529	0.21	+1.4
1,682,931	+		PfGW456L13_1529	0.21	+0.9
1,682,932	-		PfGW456L13_1529	0.21	+0.0
1,682,932	-		PfGW456L13_1529	0.21	-1.5
1,683,306	+		PfGW456L13_1529	0.53	+0.1
1,683,307	-		PfGW456L13_1529	0.53	+1.8
1,683,322	-		PfGW456L13_1529	0.54	+1.5
1,683,390	+		PfGW456L13_1529	0.60	-0.4
1,683,390	+		PfGW456L13_1529	0.60	-1.7
1,683,391	-		PfGW456L13_1529	0.60	-1.2
1,683,391	-		PfGW456L13_1529	0.60	+0.1
1,683,391	-		PfGW456L13_1529	0.60	-1.0
1,683,391	-		PfGW456L13_1529	0.60	-0.9
1,683,477	+		PfGW456L13_1529	0.67	-0.2
1,683,477	+		PfGW456L13_1529	0.67	+0.3
1,683,477	+		PfGW456L13_1529	0.67	+0.7
1,683,477	+		PfGW456L13_1529	0.67	-0.0
1,683,478	-		PfGW456L13_1529	0.67	+0.0
1,683,478	-		PfGW456L13_1529	0.67	+0.7
1,683,478	-		PfGW456L13_1529	0.67	-0.7
1,683,478	-		PfGW456L13_1529	0.67	-1.1
1,683,478	-		PfGW456L13_1529	0.67	+1.7
1,683,585	+		PfGW456L13_1529	0.76	+0.1
1,683,585	+		PfGW456L13_1529	0.76	-0.0
1,683,586	-		PfGW456L13_1529	0.77	+1.4
1,683,649	-		PfGW456L13_1529	0.82	+0.7
1,683,787	-				+0.1
1,683,787	-				+0.2
1,683,789	-				-0.9
1,683,868	+				-1.2
1,683,868	+				-0.2
1,683,868	+				+0.4
1,683,905	+				-1.2
1,683,905	+				-0.9
1,683,906	-				+0.7
1,683,906	-				+0.3
1,684,196	+		PfGW456L13_1530	0.47	+0.0
1,684,236	-		PfGW456L13_1530	0.53	+0.4
1,684,253	+		PfGW456L13_1530	0.55	-0.3
1,684,253	+		PfGW456L13_1530	0.55	+0.0
1,684,376	-		PfGW456L13_1530	0.72	+0.1
1,684,394	+		PfGW456L13_1530	0.75	-2.4
1,684,394	+		PfGW456L13_1530	0.75	-1.2
1,684,394	+		PfGW456L13_1530	0.75	+0.0
1,684,394	+		PfGW456L13_1530	0.75	-0.7
1,684,394	+		PfGW456L13_1530	0.75	+1.2
1,684,394	+		PfGW456L13_1530	0.75	-1.5
1,684,395	-		PfGW456L13_1530	0.75	-0.5
1,684,395	-		PfGW456L13_1530	0.75	+0.2
1,684,395	-		PfGW456L13_1530	0.75	-0.3
1,684,454	+		PfGW456L13_1530	0.83	-0.1
1,684,505	+				-0.8
1,684,506	-				-1.2
1,684,778	+		PfGW456L13_1531	0.65	+0.0
1,684,779	-		PfGW456L13_1531	0.66	+0.3
1,684,784	+		PfGW456L13_1531	0.67	-0.0
1,684,784	+		PfGW456L13_1531	0.67	+0.1
1,684,784	+		PfGW456L13_1531	0.67	+1.0
1,684,784	+		PfGW456L13_1531	0.67	-0.4
1,684,784	+		PfGW456L13_1531	0.67	-0.7
1,684,785	-		PfGW456L13_1531	0.68	+0.0
1,684,785	-		PfGW456L13_1531	0.68	-1.1
1,684,785	-		PfGW456L13_1531	0.68	+0.1
1,684,785	-		PfGW456L13_1531	0.68	-0.6
1,684,785	-		PfGW456L13_1531	0.68	+0.0
1,684,785	-		PfGW456L13_1531	0.68	-1.0