Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2297 and Echvi_2298 are separated by 370 nucleotides Echvi_2298 and Echvi_2299 are separated by 31 nucleotides Echvi_2299 and Echvi_2300 are separated by 456 nucleotides
Echvi_2297: Echvi_2297 - methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain, at 2,720,152 to 2,722,212
_2297
Echvi_2298: Echvi_2298 - hypothetical protein, at 2,722,583 to 2,722,810
_2298
Echvi_2299: Echvi_2299 - Phosphopantetheinyl transferase, at 2,722,842 to 2,723,618
_2299
Echvi_2300: Echvi_2300 - amino acid adenylation domain, at 2,724,075 to 2,728,100
_2300
Position (kb)
2722
2723
2724 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2721.864 kb on + strand, within Echvi_2297 at 2721.893 kb on + strand, within Echvi_2297 at 2721.893 kb on + strand, within Echvi_2297 at 2722.211 kb on - strand at 2722.219 kb on + strand at 2722.220 kb on - strand at 2722.327 kb on - strand at 2722.333 kb on + strand at 2722.343 kb on - strand at 2722.343 kb on - strand at 2722.345 kb on - strand at 2722.345 kb on - strand at 2722.422 kb on - strand at 2722.446 kb on - strand at 2722.558 kb on + strand at 2722.558 kb on + strand at 2722.558 kb on + strand at 2722.603 kb on + strand at 2722.718 kb on - strand, within Echvi_2298 at 2722.729 kb on + strand, within Echvi_2298 at 2722.777 kb on + strand, within Echvi_2298 at 2722.808 kb on + strand at 2722.841 kb on - strand at 2722.900 kb on + strand at 2722.901 kb on - strand at 2722.953 kb on + strand, within Echvi_2299 at 2722.953 kb on + strand, within Echvi_2299 at 2722.960 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.967 kb on + strand, within Echvi_2299 at 2722.968 kb on - strand, within Echvi_2299 at 2722.968 kb on - strand, within Echvi_2299 at 2722.970 kb on - strand, within Echvi_2299 at 2723.020 kb on - strand, within Echvi_2299 at 2723.048 kb on + strand, within Echvi_2299 at 2723.063 kb on + strand, within Echvi_2299 at 2723.142 kb on + strand, within Echvi_2299 at 2723.268 kb on - strand, within Echvi_2299 at 2723.276 kb on + strand, within Echvi_2299 at 2723.323 kb on + strand, within Echvi_2299 at 2723.343 kb on + strand, within Echvi_2299 at 2723.344 kb on - strand, within Echvi_2299 at 2723.347 kb on + strand, within Echvi_2299 at 2723.363 kb on + strand, within Echvi_2299 at 2723.364 kb on - strand, within Echvi_2299 at 2723.365 kb on + strand, within Echvi_2299 at 2723.366 kb on - strand, within Echvi_2299 at 2723.366 kb on - strand, within Echvi_2299 at 2723.366 kb on - strand, within Echvi_2299 at 2723.393 kb on - strand, within Echvi_2299 at 2723.393 kb on - strand, within Echvi_2299 at 2723.423 kb on + strand, within Echvi_2299 at 2723.424 kb on - strand, within Echvi_2299 at 2723.428 kb on + strand, within Echvi_2299 at 2723.429 kb on - strand, within Echvi_2299 at 2723.429 kb on - strand, within Echvi_2299 at 2723.481 kb on + strand, within Echvi_2299 at 2723.482 kb on - strand, within Echvi_2299 at 2723.482 kb on - strand, within Echvi_2299 at 2723.488 kb on - strand, within Echvi_2299 at 2723.488 kb on - strand, within Echvi_2299 at 2723.564 kb on + strand at 2723.566 kb on + strand at 2723.566 kb on + strand at 2723.566 kb on + strand at 2723.566 kb on + strand at 2723.566 kb on + strand at 2723.567 kb on - strand at 2723.567 kb on - strand at 2723.567 kb on - strand at 2723.567 kb on - strand at 2723.568 kb on + strand at 2723.568 kb on + strand at 2723.568 kb on + strand at 2723.583 kb on - strand at 2723.595 kb on - strand at 2723.651 kb on + strand at 2723.655 kb on - strand at 2723.672 kb on - strand at 2723.672 kb on - strand at 2723.684 kb on - strand at 2723.699 kb on - strand at 2723.737 kb on + strand at 2723.737 kb on + strand at 2723.738 kb on - strand at 2723.738 kb on - strand at 2723.765 kb on + strand at 2723.833 kb on - strand at 2723.833 kb on - strand at 2723.837 kb on - strand at 2723.942 kb on + strand at 2723.947 kb on + strand at 2723.975 kb on - strand at 2724.046 kb on + strand at 2724.093 kb on + strand at 2724.163 kb on - strand at 2724.163 kb on - strand at 2724.182 kb on + strand at 2724.182 kb on + strand at 2724.190 kb on + strand at 2724.208 kb on + strand at 2724.208 kb on + strand at 2724.208 kb on + strand at 2724.209 kb on - strand at 2724.222 kb on + strand at 2724.255 kb on + strand at 2724.255 kb on + strand at 2724.256 kb on - strand at 2724.272 kb on + strand at 2724.286 kb on + strand at 2724.291 kb on - strand at 2724.291 kb on - strand at 2724.291 kb on - strand at 2724.297 kb on - strand at 2724.297 kb on - strand at 2724.297 kb on - strand at 2724.372 kb on + strand at 2724.373 kb on - strand at 2724.373 kb on - strand at 2724.385 kb on - strand at 2724.399 kb on - strand at 2724.540 kb on + strand, within Echvi_2300 at 2724.557 kb on + strand, within Echvi_2300 at 2724.557 kb on + strand, within Echvi_2300 at 2724.590 kb on + strand, within Echvi_2300
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 2,721,864 + Echvi_2297 0.83 -0.9 2,721,893 + Echvi_2297 0.84 +1.2 2,721,893 + Echvi_2297 0.84 -0.4 2,722,211 - +0.7 2,722,219 + +1.0 2,722,220 - +0.5 2,722,327 - -0.4 2,722,333 + +0.6 2,722,343 - +0.1 2,722,343 - +1.6 2,722,345 - -0.9 2,722,345 - +0.7 2,722,422 - +1.6 2,722,446 - -1.1 2,722,558 + +1.2 2,722,558 + -0.3 2,722,558 + -0.8 2,722,603 + +1.3 2,722,718 - Echvi_2298 0.59 +0.4 2,722,729 + Echvi_2298 0.64 +3.5 2,722,777 + Echvi_2298 0.85 +1.9 2,722,808 + -0.1 2,722,841 - -0.5 2,722,900 + +0.7 2,722,901 - -0.2 2,722,953 + Echvi_2299 0.14 +0.4 2,722,953 + Echvi_2299 0.14 -2.6 2,722,960 + Echvi_2299 0.15 +0.5 2,722,967 + Echvi_2299 0.16 +0.6 2,722,967 + Echvi_2299 0.16 -0.8 2,722,967 + Echvi_2299 0.16 -0.5 2,722,968 - Echvi_2299 0.16 -0.6 2,722,968 - Echvi_2299 0.16 +0.7 2,722,970 - Echvi_2299 0.16 +0.4 2,723,020 - Echvi_2299 0.23 -0.1 2,723,048 + Echvi_2299 0.27 +0.1 2,723,063 + Echvi_2299 0.28 -1.5 2,723,142 + Echvi_2299 0.39 +0.4 2,723,268 - Echvi_2299 0.55 +0.7 2,723,276 + Echvi_2299 0.56 -1.8 2,723,323 + Echvi_2299 0.62 -1.8 2,723,343 + Echvi_2299 0.64 -0.2 2,723,344 - Echvi_2299 0.65 -1.5 2,723,347 + Echvi_2299 0.65 +2.1 2,723,363 + Echvi_2299 0.67 -2.0 2,723,364 - Echvi_2299 0.67 -0.5 2,723,365 + Echvi_2299 0.67 -0.1 2,723,366 - Echvi_2299 0.67 +0.7 2,723,366 - Echvi_2299 0.67 +0.1 2,723,366 - Echvi_2299 0.67 -0.3 2,723,393 - Echvi_2299 0.71 -0.7 2,723,393 - Echvi_2299 0.71 +0.0 2,723,423 + Echvi_2299 0.75 +0.9 2,723,424 - Echvi_2299 0.75 +0.7 2,723,428 + Echvi_2299 0.75 +0.1 2,723,429 - Echvi_2299 0.76 +0.8 2,723,429 - Echvi_2299 0.76 -0.1 2,723,481 + Echvi_2299 0.82 -0.4 2,723,482 - Echvi_2299 0.82 -0.3 2,723,482 - Echvi_2299 0.82 +1.9 2,723,488 - Echvi_2299 0.83 -1.6 2,723,488 - Echvi_2299 0.83 +0.0 2,723,564 + -2.6 2,723,566 + -0.9 2,723,566 + -0.7 2,723,566 + -0.6 2,723,566 + -0.1 2,723,566 + +2.3 2,723,567 - -1.2 2,723,567 - +0.4 2,723,567 - +2.2 2,723,567 - +0.7 2,723,568 + +1.4 2,723,568 + +0.0 2,723,568 + +0.4 2,723,583 - -1.2 2,723,595 - -1.2 2,723,651 + -0.5 2,723,655 - -1.6 2,723,672 - +0.0 2,723,672 - -1.1 2,723,684 - +0.5 2,723,699 - -0.7 2,723,737 + +0.8 2,723,737 + +0.2 2,723,738 - +0.1 2,723,738 - -2.9 2,723,765 + +0.1 2,723,833 - +0.6 2,723,833 - -0.2 2,723,837 - +0.9 2,723,942 + +0.8 2,723,947 + +0.6 2,723,975 - +1.0 2,724,046 + -0.7 2,724,093 + -1.6 2,724,163 - +0.2 2,724,163 - +0.3 2,724,182 + +0.1 2,724,182 + -1.0 2,724,190 + -1.1 2,724,208 + +0.6 2,724,208 + -1.8 2,724,208 + +0.1 2,724,209 - -0.1 2,724,222 + -1.3 2,724,255 + -1.6 2,724,255 + +1.4 2,724,256 - +0.7 2,724,272 + +0.6 2,724,286 + +0.6 2,724,291 - +0.5 2,724,291 - +0.3 2,724,291 - -0.3 2,724,297 - -0.2 2,724,297 - -0.9 2,724,297 - +0.4 2,724,372 + +1.4 2,724,373 - -0.3 2,724,373 - +0.8 2,724,385 - -1.0 2,724,399 - +0.0 2,724,540 + Echvi_2300 0.12 -1.8 2,724,557 + Echvi_2300 0.12 -1.8 2,724,557 + Echvi_2300 0.12 -0.6 2,724,590 + Echvi_2300 0.13 -0.6
Or see this region's nucleotide sequence