Experiment: L-Citrulline (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0574 and Echvi_0575 are separated by 52 nucleotides Echvi_0575 and Echvi_0576 are separated by 31 nucleotides Echvi_0576 and Echvi_0577 are separated by 263 nucleotides Echvi_0577 and Echvi_0578 are separated by 304 nucleotides
Echvi_0574: Echvi_0574 - hypothetical protein, at 652,641 to 652,793
_0574
Echvi_0575: Echvi_0575 - ribosomal protein L33, bacterial type, at 652,846 to 653,028
_0575
Echvi_0576: Echvi_0576 - ribosomal protein L28, at 653,060 to 653,302
_0576
Echvi_0577: Echvi_0577 - Ornithine aminotransferase (EC 2.6.1.13) <small>(from data)</small>, at 653,566 to 654,807
_0577
Echvi_0578: Echvi_0578 - Delta-aminolevulinic acid dehydratase, at 655,112 to 656,080
_0578
Position (kb) 653
654
655 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 652.568 kb on - strand at 652.568 kb on - strand at 653.406 kb on - strand at 653.474 kb on + strand at 653.474 kb on + strand at 653.475 kb on - strand at 653.475 kb on - strand at 653.475 kb on - strand at 653.475 kb on - strand at 653.520 kb on - strand at 653.522 kb on - strand at 653.526 kb on + strand at 653.559 kb on + strand at 653.560 kb on - strand at 653.628 kb on + strand at 653.629 kb on - strand at 653.632 kb on + strand at 653.632 kb on + strand at 653.632 kb on + strand at 653.632 kb on + strand at 653.633 kb on - strand at 653.633 kb on - strand at 653.677 kb on - strand at 653.818 kb on - strand, within Echvi_0577 at 653.818 kb on - strand, within Echvi_0577 at 654.122 kb on + strand, within Echvi_0577 at 654.122 kb on + strand, within Echvi_0577 at 654.122 kb on + strand, within Echvi_0577 at 654.123 kb on - strand, within Echvi_0577 at 654.125 kb on + strand, within Echvi_0577 at 654.126 kb on - strand, within Echvi_0577 at 654.185 kb on + strand, within Echvi_0577 at 654.185 kb on + strand, within Echvi_0577 at 654.185 kb on + strand, within Echvi_0577 at 654.185 kb on + strand, within Echvi_0577 at 654.186 kb on - strand, within Echvi_0577 at 654.186 kb on - strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.187 kb on + strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.188 kb on - strand, within Echvi_0577 at 654.205 kb on + strand, within Echvi_0577 at 654.210 kb on + strand, within Echvi_0577 at 654.218 kb on + strand, within Echvi_0577 at 654.218 kb on + strand, within Echvi_0577 at 654.219 kb on - strand, within Echvi_0577 at 654.245 kb on + strand, within Echvi_0577 at 654.400 kb on - strand, within Echvi_0577 at 654.551 kb on + strand, within Echvi_0577 at 654.699 kb on + strand at 654.699 kb on + strand at 654.700 kb on - strand at 654.711 kb on + strand at 654.712 kb on - strand at 654.712 kb on - strand at 654.712 kb on - strand at 654.712 kb on - strand at 654.806 kb on - strand at 654.896 kb on + strand at 654.907 kb on + strand at 654.908 kb on - strand at 654.908 kb on - strand at 654.954 kb on + strand at 654.985 kb on + strand at 655.034 kb on + strand at 655.034 kb on + strand at 655.034 kb on + strand at 655.035 kb on - strand at 655.035 kb on - strand at 655.035 kb on - strand at 655.035 kb on - strand at 655.035 kb on - strand at 655.036 kb on + strand at 655.036 kb on + strand at 655.036 kb on + strand at 655.036 kb on + strand at 655.037 kb on - strand at 655.037 kb on - strand at 655.037 kb on - strand at 655.037 kb on - strand at 655.107 kb on + strand at 655.107 kb on + strand at 655.107 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Citrulline (N) remove 652,568 - +1.1 652,568 - -3.3 653,406 - +2.4 653,474 + -0.8 653,474 + -0.3 653,475 - -0.4 653,475 - -0.4 653,475 - +0.5 653,475 - -0.6 653,520 - -1.4 653,522 - +1.7 653,526 + -0.4 653,559 + -2.2 653,560 - +0.6 653,628 + -0.7 653,629 - -0.3 653,632 + +0.3 653,632 + -2.8 653,632 + -1.2 653,632 + -0.2 653,633 - -1.6 653,633 - +1.0 653,677 - -0.7 653,818 - Echvi_0577 0.20 -1.8 653,818 - Echvi_0577 0.20 -0.0 654,122 + Echvi_0577 0.45 +0.0 654,122 + Echvi_0577 0.45 -2.5 654,122 + Echvi_0577 0.45 -0.7 654,123 - Echvi_0577 0.45 +0.0 654,125 + Echvi_0577 0.45 -1.2 654,126 - Echvi_0577 0.45 -1.7 654,185 + Echvi_0577 0.50 -1.7 654,185 + Echvi_0577 0.50 -0.1 654,185 + Echvi_0577 0.50 -0.1 654,185 + Echvi_0577 0.50 +1.8 654,186 - Echvi_0577 0.50 -1.0 654,186 - Echvi_0577 0.50 -2.2 654,187 + Echvi_0577 0.50 -0.9 654,187 + Echvi_0577 0.50 -0.9 654,187 + Echvi_0577 0.50 -1.2 654,187 + Echvi_0577 0.50 -0.2 654,187 + Echvi_0577 0.50 -0.5 654,188 - Echvi_0577 0.50 -0.1 654,188 - Echvi_0577 0.50 -1.9 654,188 - Echvi_0577 0.50 -2.1 654,188 - Echvi_0577 0.50 +1.0 654,188 - Echvi_0577 0.50 +0.9 654,188 - Echvi_0577 0.50 +0.2 654,188 - Echvi_0577 0.50 -0.9 654,188 - Echvi_0577 0.50 -0.4 654,205 + Echvi_0577 0.51 -0.3 654,210 + Echvi_0577 0.52 -0.9 654,218 + Echvi_0577 0.52 -1.0 654,218 + Echvi_0577 0.52 -0.5 654,219 - Echvi_0577 0.53 -0.8 654,245 + Echvi_0577 0.55 -0.9 654,400 - Echvi_0577 0.67 -0.4 654,551 + Echvi_0577 0.79 +0.7 654,699 + +0.3 654,699 + -0.1 654,700 - +0.2 654,711 + -0.8 654,712 - -1.8 654,712 - -1.0 654,712 - -0.4 654,712 - -0.0 654,806 - +0.3 654,896 + -0.4 654,907 + +0.4 654,908 - -1.3 654,908 - -0.9 654,954 + +2.7 654,985 + -0.6 655,034 + -0.9 655,034 + +1.7 655,034 + +1.9 655,035 - +0.0 655,035 - +1.0 655,035 - +0.7 655,035 - -0.6 655,035 - -1.1 655,036 + -2.6 655,036 + -1.0 655,036 + -0.7 655,036 + +0.4 655,037 - -1.6 655,037 - -1.3 655,037 - -0.6 655,037 - +0.0 655,107 + -1.6 655,107 + -0.8 655,107 + -2.3
Or see this region's nucleotide sequence