Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1347

Experiment: marine broth

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1346 and B158DRAFT_1347 are separated by 43 nucleotidesB158DRAFT_1347 and B158DRAFT_1348 are separated by 108 nucleotides B158DRAFT_1346: B158DRAFT_1346 - 2-methylaconitate cis-trans isomerase, at 1,391,184 to 1,392,398 _1346 B158DRAFT_1347: B158DRAFT_1347 - hypothetical protein, at 1,392,442 to 1,393,545 _1347 B158DRAFT_1348: B158DRAFT_1348 - hypothetical protein, at 1,393,654 to 1,394,670 _1348 Position (kb) 1392 1393 1394Strain fitness (log2 ratio) -1 0 1at 1391.777 kb on + strand, within B158DRAFT_1346at 1391.890 kb on + strand, within B158DRAFT_1346at 1392.112 kb on + strand, within B158DRAFT_1346at 1392.587 kb on - strand, within B158DRAFT_1347at 1392.594 kb on + strand, within B158DRAFT_1347at 1392.660 kb on - strand, within B158DRAFT_1347at 1392.726 kb on + strand, within B158DRAFT_1347at 1392.920 kb on + strand, within B158DRAFT_1347at 1392.948 kb on - strand, within B158DRAFT_1347at 1393.063 kb on - strand, within B158DRAFT_1347at 1393.153 kb on - strand, within B158DRAFT_1347at 1393.153 kb on - strand, within B158DRAFT_1347at 1393.155 kb on + strand, within B158DRAFT_1347at 1393.155 kb on + strand, within B158DRAFT_1347at 1393.155 kb on + strand, within B158DRAFT_1347at 1393.160 kb on + strand, within B158DRAFT_1347at 1393.168 kb on - strand, within B158DRAFT_1347at 1393.168 kb on - strand, within B158DRAFT_1347at 1393.382 kb on + strand, within B158DRAFT_1347at 1393.404 kb on - strand, within B158DRAFT_1347at 1393.507 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.728 kb on + strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.736 kb on - strandat 1393.738 kb on - strandat 1393.745 kb on + strandat 1393.781 kb on + strand, within B158DRAFT_1348at 1393.821 kb on + strand, within B158DRAFT_1348at 1393.994 kb on + strand, within B158DRAFT_1348at 1393.997 kb on - strand, within B158DRAFT_1348at 1393.997 kb on - strand, within B158DRAFT_1348at 1393.997 kb on - strand, within B158DRAFT_1348at 1393.997 kb on - strand, within B158DRAFT_1348at 1393.999 kb on + strand, within B158DRAFT_1348at 1394.007 kb on + strand, within B158DRAFT_1348at 1394.007 kb on - strand, within B158DRAFT_1348at 1394.008 kb on - strand, within B158DRAFT_1348at 1394.026 kb on + strand, within B158DRAFT_1348at 1394.099 kb on - strand, within B158DRAFT_1348at 1394.276 kb on + strand, within B158DRAFT_1348at 1394.283 kb on - strand, within B158DRAFT_1348at 1394.304 kb on + strand, within B158DRAFT_1348at 1394.310 kb on + strand, within B158DRAFT_1348at 1394.318 kb on - strand, within B158DRAFT_1348at 1394.318 kb on - strand, within B158DRAFT_1348at 1394.318 kb on - strand, within B158DRAFT_1348at 1394.331 kb on - strand, within B158DRAFT_1348at 1394.408 kb on + strand, within B158DRAFT_1348at 1394.470 kb on - strand, within B158DRAFT_1348

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Per-strain Table

Position Strand Gene LocusTag Fraction marine broth
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1,391,777 + B158DRAFT_1346 0.49 -1.2
1,391,890 + B158DRAFT_1346 0.58 -0.9
1,392,112 + B158DRAFT_1346 0.76 -0.3
1,392,587 - B158DRAFT_1347 0.13 -0.2
1,392,594 + B158DRAFT_1347 0.14 -0.5
1,392,660 - B158DRAFT_1347 0.20 +0.0
1,392,726 + B158DRAFT_1347 0.26 +0.7
1,392,920 + B158DRAFT_1347 0.43 -0.1
1,392,948 - B158DRAFT_1347 0.46 -0.8
1,393,063 - B158DRAFT_1347 0.56 -0.5
1,393,153 - B158DRAFT_1347 0.64 -0.2
1,393,153 - B158DRAFT_1347 0.64 -0.3
1,393,155 + B158DRAFT_1347 0.65 -0.1
1,393,155 + B158DRAFT_1347 0.65 -0.2
1,393,155 + B158DRAFT_1347 0.65 +0.0
1,393,160 + B158DRAFT_1347 0.65 +0.1
1,393,168 - B158DRAFT_1347 0.66 -0.2
1,393,168 - B158DRAFT_1347 0.66 +0.1
1,393,382 + B158DRAFT_1347 0.85 -0.4
1,393,404 - B158DRAFT_1347 0.87 -0.5
1,393,507 + +0.0
1,393,728 + -0.2
1,393,728 + -0.0
1,393,728 + -0.1
1,393,728 + +0.1
1,393,728 + -0.2
1,393,728 + -0.7
1,393,728 + +0.1
1,393,728 + +0.2
1,393,728 + -0.7
1,393,728 + +0.3
1,393,728 + -0.2
1,393,736 - +0.6
1,393,736 - +0.0
1,393,736 - +0.3
1,393,736 - -0.5
1,393,736 - -0.0
1,393,736 - -0.1
1,393,736 - +0.2
1,393,736 - +0.7
1,393,736 - +0.2
1,393,736 - +1.1
1,393,738 - +0.2
1,393,745 + +0.1
1,393,781 + B158DRAFT_1348 0.12 +0.1
1,393,821 + B158DRAFT_1348 0.16 +1.7
1,393,994 + B158DRAFT_1348 0.33 -0.2
1,393,997 - B158DRAFT_1348 0.34 -0.5
1,393,997 - B158DRAFT_1348 0.34 -0.3
1,393,997 - B158DRAFT_1348 0.34 -0.4
1,393,997 - B158DRAFT_1348 0.34 -0.1
1,393,999 + B158DRAFT_1348 0.34 -0.1
1,394,007 + B158DRAFT_1348 0.35 -0.3
1,394,007 - B158DRAFT_1348 0.35 +0.2
1,394,008 - B158DRAFT_1348 0.35 -0.3
1,394,026 + B158DRAFT_1348 0.37 +0.9
1,394,099 - B158DRAFT_1348 0.44 -0.1
1,394,276 + B158DRAFT_1348 0.61 +0.1
1,394,283 - B158DRAFT_1348 0.62 -0.3
1,394,304 + B158DRAFT_1348 0.64 -0.4
1,394,310 + B158DRAFT_1348 0.65 +0.5
1,394,318 - B158DRAFT_1348 0.65 +0.4
1,394,318 - B158DRAFT_1348 0.65 -0.1
1,394,318 - B158DRAFT_1348 0.65 -0.7
1,394,331 - B158DRAFT_1348 0.67 -0.5
1,394,408 + B158DRAFT_1348 0.74 +1.1
1,394,470 - B158DRAFT_1348 0.80 -0.9

Or see this region's nucleotide sequence