Experiment: L-Leucine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Atu0929 and Atu0930 are separated by 13 nucleotides Atu0930 and Atu0931 are separated by 345 nucleotides
Atu0929: Atu0929 - amide hydrolase, at 917,134 to 918,441
Atu0929
Atu0930: Atu0930 - hypothetical protein, at 918,455 to 919,900
Atu0930
Atu0931: Atu0931 - penicillin binding protein, at 920,246 to 922,519
Atu0931
Position (kb) 918
919
920 Strain fitness (log2 ratio) -1
0
1
2
3 at 917.503 kb on - strand, within Atu0929 at 917.645 kb on + strand, within Atu0929 at 917.658 kb on - strand, within Atu0929 at 917.688 kb on - strand, within Atu0929 at 917.740 kb on + strand, within Atu0929 at 917.762 kb on + strand, within Atu0929 at 917.818 kb on + strand, within Atu0929 at 917.843 kb on - strand, within Atu0929 at 917.862 kb on - strand, within Atu0929 at 918.007 kb on + strand, within Atu0929 at 918.029 kb on - strand, within Atu0929 at 918.043 kb on - strand, within Atu0929 at 918.053 kb on + strand, within Atu0929 at 918.053 kb on + strand, within Atu0929 at 918.053 kb on + strand, within Atu0929 at 918.059 kb on + strand, within Atu0929 at 918.059 kb on + strand, within Atu0929 at 918.059 kb on + strand, within Atu0929 at 918.059 kb on + strand, within Atu0929 at 918.059 kb on + strand, within Atu0929 at 918.067 kb on - strand, within Atu0929 at 918.067 kb on - strand, within Atu0929 at 918.067 kb on - strand, within Atu0929 at 918.067 kb on - strand, within Atu0929 at 918.121 kb on + strand, within Atu0929 at 918.130 kb on - strand, within Atu0929 at 918.207 kb on - strand, within Atu0929 at 918.244 kb on + strand, within Atu0929 at 918.412 kb on + strand at 918.648 kb on - strand, within Atu0930 at 918.702 kb on - strand, within Atu0930 at 918.729 kb on + strand, within Atu0930 at 918.747 kb on + strand, within Atu0930 at 918.770 kb on - strand, within Atu0930 at 918.783 kb on - strand, within Atu0930 at 918.797 kb on - strand, within Atu0930 at 918.861 kb on + strand, within Atu0930 at 918.969 kb on + strand, within Atu0930 at 919.103 kb on + strand, within Atu0930 at 919.166 kb on + strand, within Atu0930 at 919.246 kb on - strand, within Atu0930 at 919.246 kb on - strand, within Atu0930 at 919.246 kb on - strand, within Atu0930 at 919.325 kb on + strand, within Atu0930 at 919.402 kb on + strand, within Atu0930 at 919.448 kb on - strand, within Atu0930 at 919.493 kb on - strand, within Atu0930 at 919.504 kb on + strand, within Atu0930 at 919.504 kb on + strand, within Atu0930 at 919.512 kb on - strand, within Atu0930 at 919.512 kb on - strand, within Atu0930 at 919.512 kb on - strand, within Atu0930 at 919.512 kb on - strand, within Atu0930 at 919.602 kb on - strand, within Atu0930 at 919.658 kb on + strand, within Atu0930 at 919.667 kb on - strand, within Atu0930 at 919.699 kb on + strand, within Atu0930 at 919.707 kb on - strand, within Atu0930 at 919.766 kb on - strand at 919.802 kb on - strand at 919.819 kb on - strand at 920.093 kb on - strand at 920.162 kb on - strand at 920.170 kb on - strand at 920.246 kb on - strand at 920.249 kb on - strand at 920.401 kb on - strand at 920.426 kb on - strand at 920.518 kb on + strand, within Atu0931 at 920.591 kb on + strand, within Atu0931 at 920.627 kb on - strand, within Atu0931 at 920.700 kb on + strand, within Atu0931 at 920.708 kb on - strand, within Atu0931
Per-strain Table
Position Strand Gene LocusTag Fraction L-Leucine (N) remove 917,503 - Atu0929 0.28 +0.2 917,645 + Atu0929 0.39 +0.1 917,658 - Atu0929 0.40 +0.3 917,688 - Atu0929 0.42 +3.5 917,740 + Atu0929 0.46 -0.1 917,762 + Atu0929 0.48 -0.3 917,818 + Atu0929 0.52 -0.3 917,843 - Atu0929 0.54 +0.1 917,862 - Atu0929 0.56 +0.1 918,007 + Atu0929 0.67 -0.2 918,029 - Atu0929 0.68 +0.6 918,043 - Atu0929 0.69 -0.1 918,053 + Atu0929 0.70 +0.2 918,053 + Atu0929 0.70 -0.0 918,053 + Atu0929 0.70 -0.5 918,059 + Atu0929 0.71 +0.6 918,059 + Atu0929 0.71 +0.5 918,059 + Atu0929 0.71 +0.8 918,059 + Atu0929 0.71 +0.2 918,059 + Atu0929 0.71 +0.5 918,067 - Atu0929 0.71 +0.8 918,067 - Atu0929 0.71 +0.3 918,067 - Atu0929 0.71 +0.9 918,067 - Atu0929 0.71 +0.0 918,121 + Atu0929 0.75 -0.1 918,130 - Atu0929 0.76 +0.0 918,207 - Atu0929 0.82 -0.7 918,244 + Atu0929 0.85 +0.2 918,412 + -0.3 918,648 - Atu0930 0.13 -0.4 918,702 - Atu0930 0.17 +0.6 918,729 + Atu0930 0.19 -0.1 918,747 + Atu0930 0.20 -0.0 918,770 - Atu0930 0.22 +0.2 918,783 - Atu0930 0.23 -0.3 918,797 - Atu0930 0.24 -0.1 918,861 + Atu0930 0.28 -0.1 918,969 + Atu0930 0.36 -0.1 919,103 + Atu0930 0.45 +0.3 919,166 + Atu0930 0.49 +0.1 919,246 - Atu0930 0.55 +0.9 919,246 - Atu0930 0.55 -0.2 919,246 - Atu0930 0.55 -0.4 919,325 + Atu0930 0.60 -0.1 919,402 + Atu0930 0.65 +0.5 919,448 - Atu0930 0.69 -0.9 919,493 - Atu0930 0.72 +0.7 919,504 + Atu0930 0.73 +0.2 919,504 + Atu0930 0.73 -0.3 919,512 - Atu0930 0.73 +1.2 919,512 - Atu0930 0.73 +0.1 919,512 - Atu0930 0.73 +1.5 919,512 - Atu0930 0.73 +0.4 919,602 - Atu0930 0.79 -0.1 919,658 + Atu0930 0.83 -0.2 919,667 - Atu0930 0.84 +0.1 919,699 + Atu0930 0.86 +0.3 919,707 - Atu0930 0.87 +0.3 919,766 - +0.9 919,802 - -0.9 919,819 - -0.2 920,093 - +0.6 920,162 - +0.2 920,170 - +0.1 920,246 - -0.1 920,249 - +0.2 920,401 - +2.2 920,426 - +0.1 920,518 + Atu0931 0.12 -0.4 920,591 + Atu0931 0.15 -0.5 920,627 - Atu0931 0.17 +0.0 920,700 + Atu0931 0.20 -0.1 920,708 - Atu0931 0.20 -0.7
Or see this region's nucleotide sequence